Lista de obras - Daniel R Mende - Dominio Público Uruguay

A distinct lineage of giant viruses brings a rhodopsin photosystem to unicellular marine predators

artículo científico publicado en 2019

A human gut microbial gene catalogue established by metagenomic sequencing

artículo científico publicado en 2010

Accurate and universal delineation of prokaryotic species

artículo científico publicado en 2013

Alternative strategies of nutrient acquisition and energy conservation map to the biogeography of marine ammonia-oxidizing archaea

artículo científico publicado en 2020

Assessment of metagenomic assembly using simulated next generation sequencing data

artículo científico publicado en 2012

Bacteriophage Distributions and Temporal Variability in the Ocean's Interior

artículo científico publicado en 2017

Combined pigment and metatranscriptomic analysis reveals highly synchronized diel patterns of phenotypic light response across domains in the open oligotrophic ocean

artículo científico publicado en 2020

Combined pigment and metatranscriptomic analysis reveals synchronized diel patterns of phenotypic light response across domains in the open ocean

artículo científico publicado en 2020

Complex marine microbial communities partition metabolism of scarce resources over the diel cycle

artículo científico publicado en 2022

Consistent mutational paths predict eukaryotic thermostability

artículo científico publicado en 2013

Country-specific antibiotic use practices impact the human gut resistome

artículo científico publicado en 2013

Critical Assessment of Metagenome Interpretation: the second round of challenges

artículo científico publicado en 2022

Deciphering a global network of functionally associated post-translational modifications

artículo científico publicado en 2012

Diel cycling and long-term persistence of viruses in the ocean's euphotic zone.

artículo científico publicado en 2017

Disentangling the impact of environmental and phylogenetic constraints on prokaryotic within-species diversity

artículo científico publicado en 2020

Double-stranded DNA virioplankton dynamics and reproductive strategies in the oligotrophic open ocean water column

scientific article published on 14 February 2020

Enterotypes of the human gut microbiome

artículo científico publicado en 2011

Environmental drivers of a microbial genomic transition zone in the ocean's interior.

artículo científico

Genomic variation landscape of the human gut microbiome

artículo científico publicado en 2012

Improved Environmental Genomes via Integration of Metagenomic and Single-Cell Assemblies

artículo científico publicado en 2016

Individuality and temporal stability of the human gut microbiome.

artículo científico publicado en 2013

Integration of multi-omics data of a genome-reduced bacterium: Prevalence of post-transcriptional regulation and its correlation with protein abundances

artículo científico

Inter-individual differences in the gene content of human gut bacterial species

artículo científico publicado en 2015

Isolation and Characterization of Bacteria That Degrade Phosphonates in Marine Dissolved Organic Matter

artículo científico publicado en 2017

MOCAT: a metagenomics assembly and gene prediction toolkit

artículo científico publicado en 2012

Metabolic dependencies drive species co-occurrence in diverse microbial communities

artículo científico publicado en 2015

Metagenomic species profiling using universal phylogenetic marker genes

artículo científico publicado en 2013

Microbial abundance, activity and population genomic profiling with mOTUs2

artículo científico publicado en 2019

Ocean plankton. Structure and function of the global ocean microbiome

artículo científico publicado en 2015

Persistent Core Populations Shape the Microbiome Throughout the Water Column in the North Pacific Subtropical Gyre

scientific article published on 01 October 2019

Potential of fecal microbiota for early-stage detection of colorectal cancer

artículo científico publicado en 2014

Role for urea in nitrification by polar marine Archaea

artículo científico publicado en 2012

Siderophore-based microbial adaptations to iron scarcity across the eastern Pacific Ocean

artículo científico publicado en 2016

Towards the biogeography of prokaryotic genes

artículo científico publicado en 2021

eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences

artículo científico publicado en 2015

eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses

artículo científico publicado en 2019

proGenomes2: an improved database for accurate and consistent habitat, taxonomic and functional annotations of prokaryotic genomes

artículo científico publicado en 2020

proGenomes: a resource for consistent functional and taxonomic annotations of prokaryotic genomes

artículo científico publicado en 2016

Lista de obras de Daniel R Mende

A distinct lineage of giant viruses brings a rhodopsin photosystem to unicellular marine predators

A human gut microbial gene catalogue established by metagenomic sequencing

Accurate and universal delineation of prokaryotic species

Alternative strategies of nutrient acquisition and energy conservation map to the biogeography of marine ammonia-oxidizing archaea

Assessment of metagenomic assembly using simulated next generation sequencing data

Bacteriophage Distributions and Temporal Variability in the Ocean's Interior

Combined pigment and metatranscriptomic analysis reveals highly synchronized diel patterns of phenotypic light response across domains in the open oligotrophic ocean

Combined pigment and metatranscriptomic analysis reveals synchronized diel patterns of phenotypic light response across domains in the open ocean

Complex marine microbial communities partition metabolism of scarce resources over the diel cycle

Consistent mutational paths predict eukaryotic thermostability

Country-specific antibiotic use practices impact the human gut resistome

Critical Assessment of Metagenome Interpretation: the second round of challenges

Deciphering a global network of functionally associated post-translational modifications

Diel cycling and long-term persistence of viruses in the ocean's euphotic zone.

Disentangling the impact of environmental and phylogenetic constraints on prokaryotic within-species diversity

Double-stranded DNA virioplankton dynamics and reproductive strategies in the oligotrophic open ocean water column

Enterotypes of the human gut microbiome

Environmental drivers of a microbial genomic transition zone in the ocean's interior.

Genomic variation landscape of the human gut microbiome

Improved Environmental Genomes via Integration of Metagenomic and Single-Cell Assemblies

Individuality and temporal stability of the human gut microbiome.

Integration of multi-omics data of a genome-reduced bacterium: Prevalence of post-transcriptional regulation and its correlation with protein abundances

Inter-individual differences in the gene content of human gut bacterial species

Isolation and Characterization of Bacteria That Degrade Phosphonates in Marine Dissolved Organic Matter

MOCAT: a metagenomics assembly and gene prediction toolkit

Metabolic dependencies drive species co-occurrence in diverse microbial communities

Metagenomic species profiling using universal phylogenetic marker genes

Microbial abundance, activity and population genomic profiling with mOTUs2

Ocean plankton. Structure and function of the global ocean microbiome

Persistent Core Populations Shape the Microbiome Throughout the Water Column in the North Pacific Subtropical Gyre

Potential of fecal microbiota for early-stage detection of colorectal cancer

Role for urea in nitrification by polar marine Archaea

Siderophore-based microbial adaptations to iron scarcity across the eastern Pacific Ocean

Towards the biogeography of prokaryotic genes

eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences

eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses

proGenomes2: an improved database for accurate and consistent habitat, taxonomic and functional annotations of prokaryotic genomes

proGenomes: a resource for consistent functional and taxonomic annotations of prokaryotic genomes