Lista de obras - Michael Lund Nielsen - Dominio Público Uruguay

A Two-step Protein Quality Control Pathway for a Misfolded DJ-1 Variant in Fission Yeast ⬇️

artículo científico publicado en 2015

A dual pressure linear ion trap Orbitrap instrument with very high sequencing speed.

artículo científico publicado en 2009

A new cellular stress response that triggers centriolar satellite reorganization and ciliogenesis

artículo científico publicado en 2013

A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles

artículo científico publicado en 2011

A quantitative and site-specific atlas of the citrullinome reveals widespread existence of citrullination and insights into PADI4 substrates

artículo científico publicado en 2024

ADP-ribosylome analysis reveals homogeneous DNA-damage-induced serine ADP-ribosylation across wild-type and BRCA-mutant breast cancer cell lines

artículo científico publicado en 2024

ATP enhances neuronal differentiation of PC12 cells by activating PKCα interactions with cytoskeletal proteins.

artículo científico publicado en 2010

Advances in characterizing ubiquitylation sites by mass spectrometry.

artículo científico

Advantages of External Accumulation for Electron Capture Dissociation in Fourier Transform Mass Spectrometry

artículo científico publicado en 2001

An Advanced Strategy for Comprehensive Profiling of ADP-ribosylation Sites Using Mass Spectrometry-based Proteomics

artículo científico publicado en 2019

An Optimized Shotgun Strategy for the Rapid Generation of Comprehensive Human Proteomes

artículo científico publicado en 2017

Analytical utility of mass spectral binning in proteomic experiments by SPectral Immonium Ion Detection (SPIID).

artículo científico publicado en 2014

Analytical utility of small neutral losses from reduced species in electron capture dissociation studied using SwedECD database.

artículo científico publicado en 2008

Arginine Methylation by PRMT2 Controls the Functions of the Actin Nucleator Cobl.

artículo científico publicado en 2018

Backbone carbonyl group basicities are related to gas-phase fragmentation of peptides and protein folding.

artículo científico publicado en 2007

Biotin starvation causes mitochondrial protein hyperacetylation and partial rescue by the SIRT3-like deacetylase Hst4p

artículo científico publicado en 2015

Bub1 positions Mad1 close to KNL1 MELT repeats to promote checkpoint signalling

artículo científico publicado en 2017

CDK-mediated activation of the SCF(FBXO) (28) ubiquitin ligase promotes MYC-driven transcription and tumourigenesis and predicts poor survival in breast cancer

artículo científico publicado en 2013

Can relative cleavage frequencies in peptides provide additional sequence information?

Citrullination of HP1γ chromodomain affects association with chromatin

artículo científico publicado en 2019

Citrullination regulates pluripotency and histone H1 binding to chromatin

scientific journal article

Complementary sequence preferences of electron-capture dissociation and vibrational excitation in fragmentation of polypeptide polycations.

artículo científico publicado en 2006

Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast

artículo científico

Comprehensive profiling of proteome changes upon sequential deletion of deubiquitylating enzymes

artículo científico publicado en 2012

DNAJC9 integrates heat shock molecular chaperones into the histone chaperone network

artículo científico publicado en 2021

De novo peptide sequencing and identification with precision mass spectrometry

artículo científico publicado en 2007

Electrospray Ionization Tandem Mass Spectrometry Sequencing of Novel Skin Peptides from Ranid Frogs Containing Disulfide Bridges

scientific article published on 01 January 2007

Experiences and perspectives of MALDI MS and MS/MS in proteomic research

Extent of Modifications in Human Proteome Samples and Their Effect on Dynamic Range of Analysis in Shotgun Proteomics

artículo científico publicado en 2006

Glutamine methylation in histone H2A is an RNA-polymerase-I-dedicated modification

artículo científico publicado en 2014

Hydrogen rearrangement to and from radical z fragments in electron capture dissociation of peptides.

artículo científico publicado en 2006

HysTag--a novel proteomic quantification tool applied to differential display analysis of membrane proteins from distinct areas of mouse brain

artículo científico publicado en 2003

Identification of dominant signaling pathways from proteomics expression data.

artículo científico publicado en 2008

Immunoaffinity enrichments followed by mass spectrometric detection for studying global protein tyrosine phosphorylation.

artículo científico publicado en 2008

Improved Reversed Phase Chromatography of Hydrophilic Peptides from Spatial and Temporal Changes in Column Temperature.

artículo científico publicado en 2017

Improving protein identification using complementary fragmentation techniques in fourier transform mass spectrometry

artículo científico publicado en 2005

Integrative Characterization of the R6/2 Mouse Model of Huntington's Disease Reveals Dysfunctional Astrocyte Metabolism

artículo científico publicado en 2018

Interaction of Sox2 with RNA binding proteins in mouse embryonic stem cells

scientific article published on 09 May 2019

Iodoacetamide-induced artifact mimics ubiquitination in mass spectrometry

artículo científico publicado en 2008

Jmjd6 catalyses lysyl-hydroxylation of U2AF65, a protein associated with RNA splicing

artículo científico publicado en 2009

Large-Scale Identification of the Arginine Methylome by Mass Spectrometry

artículo científico publicado en 2015

Liquid chromatography at critical conditions: comprehensive approach to sequence-dependent retention time prediction.

artículo científico publicado en 2006

Liquid demixing of intrinsically disordered proteins is seeded by poly(ADP-ribose).

artículo científico publicado en 2015

Lysine acetylation targets protein complexes and co-regulates major cellular functions

artículo científico publicado en 2009

ModifiComb, a new proteomic tool for mapping substoichiometric post-translational modifications, finding novel types of modifications, and fingerprinting complex protein mixtures.

artículo científico publicado en 2006

Multi-site SUMOylation restrains DNA polymerase η interactions with DNA damage sites

artículo científico publicado en 2020

On studying protein phosphorylation patterns using bottom-up LC-MS/MS: the case of human alpha-casein

artículo científico publicado en 2007

Optimized fast and sensitive acquisition methods for shotgun proteomics on a quadrupole orbitrap mass spectrometer

artículo científico publicado en 2012

PAD2-Mediated Citrullination Contributes to Efficient Oligodendrocyte Differentiation and Myelination

scientific article published on 01 April 2019

Pdx1 is post-translationally modified in vivo and serine 61 is the principal site of phosphorylation

artículo científico publicado en 2012

Physicochemical Properties Determining the Detection Probability of Tryptic Peptides in Fourier Transform Mass Spectrometry. A Correlation Study

artículo científico publicado en 2004

Proteome-Wide Identification of In Vivo ADP-Ribose Acceptor Sites by Liquid Chromatography-Tandem Mass Spectrometry

artículo científico

Proteome-wide analysis of arginine monomethylation reveals widespread occurrence in human cells

artículo científico publicado en 2016

Proteome-wide identification of poly(ADP-Ribosyl)ation targets in different genotoxic stress responses

artículo científico publicado en 2013

Proteome-wide identification of the endogenous ADP-ribosylome of mammalian cells and tissue.

scientific article published on 30 September 2016

Proteomic Analysis of Arginine Methylation Sites in Human Cells Reveals Dynamic Regulation During Transcriptional Arrest

artículo científico publicado en 2014

Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues

artículo científico publicado en 2012

Proteomics-grade de novo sequencing approach

artículo científico publicado en 2005

Relative specificities of water and ammonia losses from backbone fragments in collision-activated dissociation.

artículo científico publicado en 2007

SUMOylation promotes protective responses to DNA-protein crosslinks

article

Serine-linked PARP1 auto-modification controls PARP inhibitor response

artículo científico publicado en 2021

Shifted-basis technique improves accuracy of peak position determination in Fourier transform mass spectrometry.

artículo científico publicado en 2004

Side-Chain Losses in Electron Capture Dissociation To Improve Peptide Identification

artículo científico publicado en 2007

Site-specific characterization of endogenous SUMOylation across species and organs.

artículo científico publicado en 2018

Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation

artículo científico publicado en 2017

Site-specific phosphorylation of PSD-95 dynamically regulates the postsynaptic density as observed by phase separation

artículo científico publicado en 2021

Specificity and Commonality of the Phosphoinositide-Binding Proteome Analyzed by Quantitative Mass Spectrometry

artículo científico publicado en 2014

Specifying RNA-Binding Regions in Proteins by Peptide Cross-Linking and Affinity Purification

artículo científico publicado en 2017

SwedCAD, a database of annotated high-mass accuracy MS/MS spectra of tryptic peptides

artículo científico publicado en 2007

Systems-wide Analysis of Serine ADP-Ribosylation Reveals Widespread Occurrence and Site-Specific Overlap with Phosphorylation

artículo científico publicado en 2018

Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass

artículo científico publicado en 2012

Tandem MALDI/EI ionization for tandem Fourier transform ion cyclotron resonance mass spectrometry of polypeptides

The NBS1-Treacle complex controls ribosomal RNA transcription in response to DNA damage

artículo científico publicado en 2014

The RBCC gene RFP2 (Leu5) encodes a novel transmembrane E3 ubiquitin ligase involved in ERAD

artículo científico publicado en 2007

The SOCS2 ubiquitin ligase complex regulates growth hormone receptor levels

artículo científico publicado en 2011

The molecular basis of ATM-dependent dimerization of the Mdc1 DNA damage checkpoint mediator

artículo científico publicado en 2012

The regulatory landscape of the human HPF1- and ARH3-dependent ADP-ribosylome

artículo científico publicado en 2021

Tousled-like kinases phosphorylate Asf1 to promote histone supply during DNA replication.

scientific article published on 06 March 2014

Treacle controls the nucleolar response to rDNA breaks via TOPBP1 recruitment and ATR activation

scientific article published on 08 January 2020

Unrestrained poly-ADP-ribosylation provides insights into chromatin regulation and human disease

artículo científico publicado en 2021

Using Guanidine-Hydrochloride for Fast and Efficient Protein Digestion and Single-step Affinity-purification Mass Spectrometry

artículo científico publicado en 2012

VCF1 is a p97/VCP cofactor promoting recognition of ubiquitylated p97-UFD1-NPL4 substrates

artículo científico publicado en 2024

Waves of sumoylation support transcription dynamics during adipocyte differentiation

artículo científico publicado en 2022

Lista de obras de Michael Lund Nielsen

A Two-step Protein Quality Control Pathway for a Misfolded DJ-1 Variant in Fission Yeast ⬇️

A dual pressure linear ion trap Orbitrap instrument with very high sequencing speed.

A new cellular stress response that triggers centriolar satellite reorganization and ciliogenesis

A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles

A quantitative and site-specific atlas of the citrullinome reveals widespread existence of citrullination and insights into PADI4 substrates

ADP-ribosylome analysis reveals homogeneous DNA-damage-induced serine ADP-ribosylation across wild-type and BRCA-mutant breast cancer cell lines

ATP enhances neuronal differentiation of PC12 cells by activating PKCα interactions with cytoskeletal proteins.

Advances in characterizing ubiquitylation sites by mass spectrometry.

Advantages of External Accumulation for Electron Capture Dissociation in Fourier Transform Mass Spectrometry

An Advanced Strategy for Comprehensive Profiling of ADP-ribosylation Sites Using Mass Spectrometry-based Proteomics

An Optimized Shotgun Strategy for the Rapid Generation of Comprehensive Human Proteomes

Analytical utility of mass spectral binning in proteomic experiments by SPectral Immonium Ion Detection (SPIID).

Analytical utility of small neutral losses from reduced species in electron capture dissociation studied using SwedECD database.

Arginine Methylation by PRMT2 Controls the Functions of the Actin Nucleator Cobl.

Backbone carbonyl group basicities are related to gas-phase fragmentation of peptides and protein folding.

Biotin starvation causes mitochondrial protein hyperacetylation and partial rescue by the SIRT3-like deacetylase Hst4p

Bub1 positions Mad1 close to KNL1 MELT repeats to promote checkpoint signalling

CDK-mediated activation of the SCF(FBXO) (28) ubiquitin ligase promotes MYC-driven transcription and tumourigenesis and predicts poor survival in breast cancer

Can relative cleavage frequencies in peptides provide additional sequence information?

Citrullination of HP1γ chromodomain affects association with chromatin

Citrullination regulates pluripotency and histone H1 binding to chromatin

Complementary sequence preferences of electron-capture dissociation and vibrational excitation in fragmentation of polypeptide polycations.

Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast

Comprehensive profiling of proteome changes upon sequential deletion of deubiquitylating enzymes

DNAJC9 integrates heat shock molecular chaperones into the histone chaperone network

De novo peptide sequencing and identification with precision mass spectrometry

Electrospray Ionization Tandem Mass Spectrometry Sequencing of Novel Skin Peptides from Ranid Frogs Containing Disulfide Bridges

Experiences and perspectives of MALDI MS and MS/MS in proteomic research

Extent of Modifications in Human Proteome Samples and Their Effect on Dynamic Range of Analysis in Shotgun Proteomics

Glutamine methylation in histone H2A is an RNA-polymerase-I-dedicated modification

Hydrogen rearrangement to and from radical z fragments in electron capture dissociation of peptides.

HysTag--a novel proteomic quantification tool applied to differential display analysis of membrane proteins from distinct areas of mouse brain

Identification of dominant signaling pathways from proteomics expression data.

Immunoaffinity enrichments followed by mass spectrometric detection for studying global protein tyrosine phosphorylation.

Improved Reversed Phase Chromatography of Hydrophilic Peptides from Spatial and Temporal Changes in Column Temperature.

Improving protein identification using complementary fragmentation techniques in fourier transform mass spectrometry

Integrative Characterization of the R6/2 Mouse Model of Huntington's Disease Reveals Dysfunctional Astrocyte Metabolism

Interaction of Sox2 with RNA binding proteins in mouse embryonic stem cells

Iodoacetamide-induced artifact mimics ubiquitination in mass spectrometry

Jmjd6 catalyses lysyl-hydroxylation of U2AF65, a protein associated with RNA splicing

Large-Scale Identification of the Arginine Methylome by Mass Spectrometry

Liquid chromatography at critical conditions: comprehensive approach to sequence-dependent retention time prediction.

Liquid demixing of intrinsically disordered proteins is seeded by poly(ADP-ribose).

Lysine acetylation targets protein complexes and co-regulates major cellular functions

ModifiComb, a new proteomic tool for mapping substoichiometric post-translational modifications, finding novel types of modifications, and fingerprinting complex protein mixtures.

Multi-site SUMOylation restrains DNA polymerase η interactions with DNA damage sites

On studying protein phosphorylation patterns using bottom-up LC-MS/MS: the case of human alpha-casein

Optimized fast and sensitive acquisition methods for shotgun proteomics on a quadrupole orbitrap mass spectrometer

PAD2-Mediated Citrullination Contributes to Efficient Oligodendrocyte Differentiation and Myelination

Pdx1 is post-translationally modified in vivo and serine 61 is the principal site of phosphorylation

Physicochemical Properties Determining the Detection Probability of Tryptic Peptides in Fourier Transform Mass Spectrometry. A Correlation Study

Proteome-Wide Identification of In Vivo ADP-Ribose Acceptor Sites by Liquid Chromatography-Tandem Mass Spectrometry

Proteome-wide analysis of arginine monomethylation reveals widespread occurrence in human cells

Proteome-wide identification of poly(ADP-Ribosyl)ation targets in different genotoxic stress responses

Proteome-wide identification of the endogenous ADP-ribosylome of mammalian cells and tissue.

Proteomic Analysis of Arginine Methylation Sites in Human Cells Reveals Dynamic Regulation During Transcriptional Arrest

Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues

Proteomics-grade de novo sequencing approach

Relative specificities of water and ammonia losses from backbone fragments in collision-activated dissociation.

SUMOylation promotes protective responses to DNA-protein crosslinks

Serine-linked PARP1 auto-modification controls PARP inhibitor response

Shifted-basis technique improves accuracy of peak position determination in Fourier transform mass spectrometry.

Side-Chain Losses in Electron Capture Dissociation To Improve Peptide Identification

Site-specific characterization of endogenous SUMOylation across species and organs.

Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation

Site-specific phosphorylation of PSD-95 dynamically regulates the postsynaptic density as observed by phase separation

Specificity and Commonality of the Phosphoinositide-Binding Proteome Analyzed by Quantitative Mass Spectrometry

Specifying RNA-Binding Regions in Proteins by Peptide Cross-Linking and Affinity Purification

SwedCAD, a database of annotated high-mass accuracy MS/MS spectra of tryptic peptides

Systems-wide Analysis of Serine ADP-Ribosylation Reveals Widespread Occurrence and Site-Specific Overlap with Phosphorylation

Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass

Tandem MALDI/EI ionization for tandem Fourier transform ion cyclotron resonance mass spectrometry of polypeptides

The NBS1-Treacle complex controls ribosomal RNA transcription in response to DNA damage

The RBCC gene RFP2 (Leu5) encodes a novel transmembrane E3 ubiquitin ligase involved in ERAD

The SOCS2 ubiquitin ligase complex regulates growth hormone receptor levels

The molecular basis of ATM-dependent dimerization of the Mdc1 DNA damage checkpoint mediator

The regulatory landscape of the human HPF1- and ARH3-dependent ADP-ribosylome

Tousled-like kinases phosphorylate Asf1 to promote histone supply during DNA replication.

Treacle controls the nucleolar response to rDNA breaks via TOPBP1 recruitment and ATR activation