Lista de obras - Kiyoko F Aoki-Kinoshita - Dominio Público Uruguay

2 nd FCCA Symposium/Annual Forum for Young Glyco-Scientists 2015

A consensus-based and readable extension of Linear Code for Reaction Rules (LiCoRR)

scientific article published on 27 October 2020

A global representation of the carbohydrate structures: a tool for the analysis of glycan.

artículo científico publicado en 2005

A gram distribution kernel applied to glycan classification and motif extraction.

artículo científico publicado en 2006

A systematic framework to derive N-glycan biosynthesis process and the automated construction of glycosylation networks

artículo científico publicado en 2016

A weighted q-gram method for glycan structure classification

artículo científico publicado en 2010

An Efficient Unordered Tree Kernel and Its Application to Glycan Classification

An introduction to bioinformatics for glycomics research

artículo científico publicado en 2008

Analyzing Glycan-Binding Profiles Using Weighted Multiple Alignment of Trees

artículo científico publicado en 2018

Analyzing glycan structure synthesis with the Glycan Pathway Predictor (GPP) Tool

artículo científico publicado en 2015

Analyzing glycan-binding patterns with the ProfilePSTMM Tool

artículo científico publicado en 2015

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains

artículo científico publicado en 2014

BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services

artículo científico publicado en 2019

Bioinformatics approaches in glycomics and drug discovery.

artículo científico publicado en 2006

CarbArrayART: a new software tool for carbohydrate microarray data storage, processing, presentation, and reporting

artículo científico publicado en 2022

Comprehensive analysis of the N-glycan biosynthetic pathway using bioinformatics to generate UniCorn: A theoretical N-glycan structure database.

artículo científico publicado en 2016

Development and application of an algorithm to compute weighted multiple glycan alignments

artículo científico publicado en 2017

Enhanced validation of small-molecule ligands and carbohydrates in the Protein Data Bank

Extracting glycan motifs using a biochemically-weighted kernel ⬇️

artículo científico publicado el 21 de diciembre de 2011

Frequent glycan structure mining of influenza virus data revealed a sulfated glycan motif that increased viral infection

artículo científico publicado en 2013

From genomics to chemical genomics: new developments in KEGG

artículo científico publicado en 2006

Frontiers in glycomics: Bioinformatics and biomarkers in disease An NIH White Paper prepared from discussions by the focus groups at a workshop on the NIH campus, Bethesda MD (September 11–13, 2006)

article

Gene annotation and pathway mapping in KEGG

scientific article published on 01 January 2007

GlyComb: A novel glycoconjugate data repository that bridges glycomics and proteomics

artículo científico publicado en 2024

GlyGen data model and processing workflow

scientific article published on 23 April 2020

GlyGen: Computational and Informatics Resources for Glycoscience

artículo científico publicado en 2020

GlyTouCan 1.0--The international glycan structure repository

artículo científico publicado en 2015

GlyTouCan: an accessible glycan structure repository.

artículo científico publicado en 2017

GlycanFormatConverter: a conversion tool for translating the complexities of glycans

scientific article published on 01 July 2019

GlycoPOST realizes FAIR principles for glycomics mass spectrometry data

artículo científico publicado en 2020

GlycoRDF: an ontology to standardize glycomics data in RDF

artículo científico publicado en 2015

Glycoinformatics

Glycomic analysis using KEGG GLYCAN.

artículo científico publicado en 2015

Identification of genes required for neural-specific glycosylation using functional genomics

artículo científico publicado en 2010

Identification of proteasome components required for apical localization of Chaoptin using functional genomics

artículo científico publicado en 2012

Implementation of GlycanBuilder to draw a wide variety of ambiguous glycans.

artículo científico publicado en 2017

Implementation of linked data in the life sciences at BioHackathon 2011

artículo científico publicado en 2015

Improving MHC binding peptide prediction by incorporating binding data of auxiliary MHC molecules

artículo científico publicado en 2006

Introducing glycomics data into the Semantic Web.

artículo científico publicado en 2013

Introduction to Informatics in Glycoprotein Analysis ⬇️

artículo científico publicado el 1 de enero de 2013

KEGG as a glycome informatics resource

artículo científico publicado en 2006

Knowledge discovery for pancreatic cancer using inductive logic programming

artículo científico publicado en 2014

LM-GlycomeAtlas Ver. 1.0: A Novel Visualization Tool for Lectin Microarray-Based Glycomic Profiles of Mouse Tissue Sections

artículo científico publicado en 2019

MCAW-DB: A glycan profile database capturing the ambiguity of glycan recognition patterns

artículo científico publicado en 2018

MIRAGE: the minimum information required for a glycomics experiment

artículo científico publicado en 2014

Mining Frequent Subtrees in Glycan Data Using the Rings Glycan Miner Tool ⬇️

artículo científico publicado el 1 de enero de 2013

Modeling genetic regulatory networks: a delay discrete dynamical model approach

On using physico-chemical properties of amino acids in string kernels for protein classification via support vector machines

Overview of KEGG applications to omics-related research

scientific article published in 2006

Phenotype-based clustering of glycosylation-related genes by RNAi-mediated gene silencing.

artículo científico publicado en 2015

ProfilePSTMM: capturing tree-structure motifs in carbohydrate sugar chains

artículo científico publicado en 2006

Symbol Nomenclature for Graphical Representations of Glycans

artículo científico publicado en 2015

Systems glycomics of adult zebrafish identifies organ-specific sialylation and glycosylation patterns

artículo científico publicado en 2018

The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications

artículo científico publicado en 2011

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. The DBCLS BioHackathon Consortium*

artículo científico publicado en 2010

The GlyCosmos Portal: a unified and comprehensive web resource for the glycosciences

artículo científico publicado en 2020

The GlySpace Alliance: toward a collaborative global glycoinformatics community

artículo científico publicado en 2020

The Glycome Analytics Platform: an integrative framework for glycobioinformatics.

artículo científico publicado en 2016

The GlycomeAtlas tool for visualizing and querying glycome data

artículo científico publicado en 2012

The Lectin Frontier Database (LfDB), and data generation based on frontal affinity chromatography

artículo científico publicado en 2015

The RINGS resource for glycome informatics analysis and data mining on the Web.

artículo científico publicado en 2010

The Third ACGG-DB Meeting Report: Towards an international collaborative infrastructure for glycobioinformatics

artículo científico publicado en 2013

The glycoconjugate ontology (GlycoCoO) for standardizing the annotation of glycoconjugate data and its application

artículo científico publicado en 2021

The international glycan repository GlyTouCan version 3.0.

artículo científico publicado en 2020

The minimum information required for a glycomics experiment (MIRAGE) project: improving the standards for reporting glycan microarray-based data.

artículo científico publicado en 2016

The minimum information required for a glycomics experiment (MIRAGE) project: sample preparation guidelines for reliable reporting of glycomics datasets

artículo científico publicado en 2016

Toolboxes for a standardised and systematic study of glycans

artículo científico publicado en 2014

Towards a standardized bioinformatics infrastructure for N- and O-glycomics

scientific article published on 22 July 2019

Trends and Future Perspectives for Glycoinformatics

UniCarbKB: building a knowledge platform for glycoproteomics

artículo científico publicado en 2013

UniCarbKB: putting the pieces together for glycomics research

artículo científico

Updates to the Symbol Nomenclature for Glycans guidelines

scientific article published on 01 August 2019

Using Databases and Web Resources for Glycomics Research ⬇️

artículo científico publicado el 16 de enero de 2013

Using glycome databases for drug discovery ⬇️

artículo científico publicado el 1 de agosto de 2008

WURCS 2.0 Update To Encapsulate Ambiguous Carbohydrate Structures

artículo científico publicado en 2017

WURCS: the Web3 unique representation of carbohydrate structures.

artículo científico publicado en 2014

[Introduction to glycome informatics]

scientific article published on 01 November 2008

Lista de obras de Kiyoko F Aoki-Kinoshita

2 nd FCCA Symposium/Annual Forum for Young Glyco-Scientists 2015

A consensus-based and readable extension of Linear Code for Reaction Rules (LiCoRR)

A global representation of the carbohydrate structures: a tool for the analysis of glycan.

A gram distribution kernel applied to glycan classification and motif extraction.

A systematic framework to derive N-glycan biosynthesis process and the automated construction of glycosylation networks

A weighted q-gram method for glycan structure classification

An Efficient Unordered Tree Kernel and Its Application to Glycan Classification

An introduction to bioinformatics for glycomics research

Analyzing Glycan-Binding Profiles Using Weighted Multiple Alignment of Trees

Analyzing glycan structure synthesis with the Glycan Pathway Predictor (GPP) Tool

Analyzing glycan-binding patterns with the ProfilePSTMM Tool

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains

BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services

Bioinformatics approaches in glycomics and drug discovery.

CarbArrayART: a new software tool for carbohydrate microarray data storage, processing, presentation, and reporting

Comprehensive analysis of the N-glycan biosynthetic pathway using bioinformatics to generate UniCorn: A theoretical N-glycan structure database.

Development and application of an algorithm to compute weighted multiple glycan alignments

Enhanced validation of small-molecule ligands and carbohydrates in the Protein Data Bank

Extracting glycan motifs using a biochemically-weighted kernel ⬇️

Frequent glycan structure mining of influenza virus data revealed a sulfated glycan motif that increased viral infection

From genomics to chemical genomics: new developments in KEGG

Frontiers in glycomics: Bioinformatics and biomarkers in disease An NIH White Paper prepared from discussions by the focus groups at a workshop on the NIH campus, Bethesda MD (September 11–13, 2006)

Gene annotation and pathway mapping in KEGG

GlyComb: A novel glycoconjugate data repository that bridges glycomics and proteomics

GlyGen data model and processing workflow

GlyGen: Computational and Informatics Resources for Glycoscience

GlyTouCan 1.0--The international glycan structure repository

GlyTouCan: an accessible glycan structure repository.

GlycanFormatConverter: a conversion tool for translating the complexities of glycans

GlycoPOST realizes FAIR principles for glycomics mass spectrometry data

GlycoRDF: an ontology to standardize glycomics data in RDF

Glycoinformatics

Glycomic analysis using KEGG GLYCAN.

Identification of genes required for neural-specific glycosylation using functional genomics

Identification of proteasome components required for apical localization of Chaoptin using functional genomics

Implementation of GlycanBuilder to draw a wide variety of ambiguous glycans.

Implementation of linked data in the life sciences at BioHackathon 2011

Improving MHC binding peptide prediction by incorporating binding data of auxiliary MHC molecules

Introducing glycomics data into the Semantic Web.

Introduction to Informatics in Glycoprotein Analysis ⬇️

KEGG as a glycome informatics resource

Knowledge discovery for pancreatic cancer using inductive logic programming

LM-GlycomeAtlas Ver. 1.0: A Novel Visualization Tool for Lectin Microarray-Based Glycomic Profiles of Mouse Tissue Sections

MCAW-DB: A glycan profile database capturing the ambiguity of glycan recognition patterns

MIRAGE: the minimum information required for a glycomics experiment

Mining Frequent Subtrees in Glycan Data Using the Rings Glycan Miner Tool ⬇️

Modeling genetic regulatory networks: a delay discrete dynamical model approach

On using physico-chemical properties of amino acids in string kernels for protein classification via support vector machines

Overview of KEGG applications to omics-related research

Phenotype-based clustering of glycosylation-related genes by RNAi-mediated gene silencing.

ProfilePSTMM: capturing tree-structure motifs in carbohydrate sugar chains

Symbol Nomenclature for Graphical Representations of Glycans

Systems glycomics of adult zebrafish identifies organ-specific sialylation and glycosylation patterns

The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. The DBCLS BioHackathon Consortium*

The GlyCosmos Portal: a unified and comprehensive web resource for the glycosciences

The GlySpace Alliance: toward a collaborative global glycoinformatics community

The Glycome Analytics Platform: an integrative framework for glycobioinformatics.

The GlycomeAtlas tool for visualizing and querying glycome data

The Lectin Frontier Database (LfDB), and data generation based on frontal affinity chromatography

The RINGS resource for glycome informatics analysis and data mining on the Web.

The Third ACGG-DB Meeting Report: Towards an international collaborative infrastructure for glycobioinformatics

The glycoconjugate ontology (GlycoCoO) for standardizing the annotation of glycoconjugate data and its application

The international glycan repository GlyTouCan version 3.0.

The minimum information required for a glycomics experiment (MIRAGE) project: improving the standards for reporting glycan microarray-based data.

The minimum information required for a glycomics experiment (MIRAGE) project: sample preparation guidelines for reliable reporting of glycomics datasets

Toolboxes for a standardised and systematic study of glycans

Towards a standardized bioinformatics infrastructure for N- and O-glycomics

Trends and Future Perspectives for Glycoinformatics

UniCarbKB: building a knowledge platform for glycoproteomics

UniCarbKB: putting the pieces together for glycomics research

Updates to the Symbol Nomenclature for Glycans guidelines

Using Databases and Web Resources for Glycomics Research ⬇️

Using glycome databases for drug discovery ⬇️

WURCS 2.0 Update To Encapsulate Ambiguous Carbohydrate Structures

WURCS: the Web3 unique representation of carbohydrate structures.

[Introduction to glycome informatics]