Lista de obras - Mik Black - Dominio Público Uruguay

A Bayesian model for classifying all differentially expressed proteins simultaneously in 2D PAGE gels.

artículo científico publicado en 2012

A New Role for ERα: Silencing via DNA Methylation of Basal, Stem Cell, and EMT Genes

artículo científico publicado en 2016

A Predictor of Early Disease Recurrence in Patients With Breast Cancer Using a Cell-free RNA and Protein Liquid Biopsy

artículo científico publicado en 2019

A bioinformatics workflow for detecting signatures of selection in genomic data

artículo científico publicado en 2014

A collection of annotated and harmonized human breast cancer transcriptome datasets, including immunologic classification.

artículo científico publicado en 2017

A proteomic approach identifies early pregnancy biomarkers for preeclampsia: novel linkages between a predisposition to preeclampsia and cardiovascular disease.

artículo científico publicado en 2009

A statistical model to identify differentially expressed proteins in 2D PAGE gels

artículo científico publicado en 2009

Abstract 1116: Sleeping Beauty mutagenesis identifies genes and pathways that cooperate with BrafV600E in melanoma initiation and progression

artículo científico publicado en 2013

Accounting for Errors in Low Coverage High-Throughput Sequencing Data When Constructing Genetic Maps Using Biparental Outcrossed Populations.

artículo científico publicado en 2018

Allosteric AKT Inhibitors Target Synthetic Lethal Vulnerabilities in E-Cadherin-Deficient Cells

scientific article published on 13 September 2019

Altered transcription of murine genes induced in the small bowel by administration of probiotic strain Lactobacillus rhamnosus HN001.

artículo científico publicado en 2014

An altered pattern of circulating apolipoprotein E3 isoforms is implicated in preeclampsia

artículo científico publicado en 2008

An iron regulatory gene signature predicts outcome in breast cancer.

artículo científico publicado en 2011

Analysis of the DISC1 translocation partner (11q14.3) in genetic risk of schizophrenia

artículo científico publicado en 2012

Analyzing tumor heterogeneity and driver genes in single myeloid leukemia cells with SBCapSeq

artículo científico publicado en 2016

Association of SLC2A9 genotype with phenotypic variability of serum urate in pre-menopausal women

artículo científico publicado en 2015

Bulk and Single-Cell Profiling of Breast Tumors Identifies TREM-1 as a Dominant Immune Suppressive Marker Associated With Poor Outcomes

artículo científico publicado en 2021

CNVrd, a read-depth algorithm for assigning copy-number at the FCGR locus: population-specific tagging of copy number variation at FCGR3B

artículo científico publicado en 2013

Calculation of the minimum number of replicate spots required for detection of significant gene expression fold change in microarray experiments

artículo científico publicado en 2002

Circulating tumor DNA is a sensitive marker for routine monitoring of treatment response in advanced colorectal cancer

artículo científico publicado en 2020

Clinical risk prediction for pre-eclampsia in nulliparous women: development of model in international prospective cohort

artículo científico publicado en 2011

Clinico-pathological factors influencing lymph node yield in colorectal cancer and impact on survival: analysis of New Zealand Cancer Registry data

artículo científico publicado en 2015

Combined genomic and phenotype screening reveals secretory factor SPINK1 as an invasion and survival factor associated with patient prognosis in breast cancer

artículo científico publicado en 2011

Comparison of Roche Cell-Free DNA collection Tubes ® to Streck Cell-Free DNA BCT ® s for sample stability using healthy volunteers

scientific article published on 18 June 2019

Context-specific gene regulatory networks subdivide intrinsic subtypes of breast cancer

artículo científico publicado en 2011

Control of the False Discovery Rate Applied to the Detection of Positively Selected Amino Acid Sites

article

Copy number variants implicate cardiac function and development pathways in earthquake-induced stress cardiomyopathy

artículo científico publicado en 2018

Copy number variants implicate cardiac function and development pathways in earthquake-induced stress cardiomyopathy

article

Copy number variants in the sheep genome detected using multiple approaches

artículo científico publicado en 2016

Cyclin E2 overexpression is associated with endocrine resistance but not insensitivity to CDK2 inhibition in human breast cancer cells.

artículo científico publicado en 2012

Differential Gene Expression in Cultured Osteoblasts and Bone Marrow Stromal Cells From Patients With Paget's Disease of Bone

artículo científico publicado en 2006

Distinctive subpopulations of stromal cells are present in human lymph nodes infiltrated with melanoma

artículo científico publicado en 2020

Dual roles for immune metagenes in breast cancer prognosis and therapy prediction

artículo científico publicado en 2014

Duration of sexual relationship and its effect on preeclampsia and small for gestational age perinatal outcome

artículo científico publicado en 2009

E-cadherin loss alters cytoskeletal organization and adhesion in non-malignant breast cells but is insufficient to induce an epithelial-mesenchymal transition

artículo científico publicado en 2014

E-cadherin-deficient cells have synthetic lethal vulnerabilities in plasma membrane organisation, dynamics and function

artículo científico publicado en 2018

Early pregnancy prediction of preeclampsia in nulliparous women, combining clinical risk and biomarkers: the Screening for Pregnancy Endpoints (SCOPE) international cohort study.

artículo científico publicado en 2014

Erratum to: JMJD6 is a driver of cellular proliferation and motility and a marker of poor prognosis in breast cancer

artículo científico publicado en 2017

Estimating disease prevalence in the absence of a gold standard

artículo científico publicado en 2002

Evaluating accuracy of diagnostic tests with intermediate results in the absence of a gold standard

artículo científico publicado en 2012

Exploring possible DNA structures in real-time polymerase kinetics using Pacific Biosciences sequencer data

artículo científico publicado en 2015

Fatty acid oxidation is associated with proliferation and prognosis in breast and other cancers

Frequency of CYP2C9 polymorphisms in Polynesian people and potential relevance to management of gout with benzbromarone

artículo científico publicado en 2013

Functional impairment of infiltrating T cells in human colorectal cancer

artículo científico publicado en 2016

Gene expression profiling of breast tumours from New Zealand patients

artículo científico publicado en 2017

Genetic sex assignment in wild populations using GBS data: a statistical threshold approach.

artículo científico publicado en 2018

Genome-wide methylation analysis identifies a core set of hypermethylated genes in CIMP-H colorectal cancer

artículo científico publicado en 2017

Genomic selection of reference genes for real-time PCR in human myocardium

artículo científico publicado en 2008

Germline mutations and somatic inactivation of TRIM28 in Wilms tumour.

artículo científico publicado en 2018

Heterologous hybridisation to a Pinus microarray: profiling of gene expression in Pinus radiata saplings exposed to ethephon

article

High-Dimensional Mass Cytometric Analysis Reveals an Increase in Effector Regulatory T Cells as a Distinguishing Feature of Colorectal Tumors

artículo científico publicado en 2019

Histological and transcriptomic effects of 17α-methyltestosterone on zebrafish gonad development

artículo científico publicado en 2017

Identification of sex differences in zebrafish (Danio rerio) brains during early sexual differentiation and masculinisation using 17α-methyltestoterone

artículo científico publicado en 2017

Immune gene signatures and tumor intrinsic markers delineate novel immunogenic subtypes of breast cancer

artículo científico publicado en 2014

Immunogenic Subtypes of Breast Cancer Delineated by Gene Classifiers of Immune Responsiveness

artículo científico publicado en 2016

Imprinted and ancient gene: a potential mediator of cancer cell survival during tryptophan deprivation

article

Increased gene expression variability in BRCA1-associated and basal-like breast tumours

artículo científico publicado en 2021

Incremental cost-effectiveness ratio and incremental net-health benefit: two sides of the same coin

artículo científico publicado en 2001

Inflammatory and regulatory T cells contribute to a unique immune microenvironment in tumor tissue of colorectal cancer patients.

artículo científico publicado en 2012

Influence of age and site of disease on lymph node yield in colorectal cancer

artículo científico publicado en 2014

Insertional mutagenesis defines drivers and evolutionary relationships in pancreatic cancer metastasis

artículo científico publicado en 2020

Interactions between immunity, proliferation and molecular subtype in breast cancer prognosis

scientific article published on 29 April 2013

JMJD6 is a driver of cellular proliferation and motility and a marker of poor prognosis in breast cancer.

artículo científico publicado en 2012

Lack of direct evidence for natural selection at the candidate thrifty gene locus, PPARGC1A

artículo científico publicado en 2016

Large-scale transcriptome sequencing reveals novel expression patterns for key sex-related genes in a sex-changing fish.

artículo científico publicado en 2015

Lentiviral-mediated gene transfer to the sheep brain: implications for gene therapy in Batten disease.

artículo científico publicado en 2011

MelanomaDB: A Web Tool for Integrative Analysis of Melanoma Genomic Information to Identify Disease-Associated Molecular Pathways

artículo científico publicado en 2013

Microarray-based gene set analysis: a comparison of current methods

artículo científico publicado en 2008

Microarrays--analysis of signaling pathways

artículo científico publicado en 2008

Microsatellite tandem repeats are abundant in human promoters and are associated with regulatory elements

artículo científico publicado en 2013

Multimodal Assessment of Estrogen Receptor mRNA Profiles to Quantify Estrogen Pathway Activity in Breast Tumors

artículo científico publicado en 2016

Multiple Gene Expression Classifiers from Different Array Platforms Predict Poor Prognosis of Colorectal Cancer

article

Mutations in genes encoding the cadherin receptor-ligand pair DCHS1 and FAT4 disrupt cerebral cortical development

scientific journal article

Non-invasive assessment of epidermal genomic markers of UV exposure in skin

scientific article published on 15 June 2020

Oligonucleotide array outperforms SNP array on formalin-fixed paraffin-embedded clinical samples

artículo científico

Paternal contribution to small for gestational age babies: a multicenter prospective study

artículo científico publicado en 2010

Predicting clinical outcome through molecular profiling in stage III melanoma

artículo científico publicado en 2008

Prediction of preeclampsia and delivery of small for gestational age babies based on a combination of clinical risk factors in high-risk women

artículo científico publicado en 2010

Prognostic roles for IL-2-producing and CD69 T cell subsets in colorectal cancer patients

artículo científico publicado en 2018

Pseudomonas syringae pv. actinidiae from recent outbreaks of kiwifruit bacterial canker belong to different clones that originated in China

artículo científico publicado en 2013

Recurrent loss of heterozygosity correlates with clinical outcome in pancreatic neuroendocrine cancer

scientific article published on 20 July 2018

Reduced expression of a gene proliferation signature is associated with enhanced malignancy in colon cancer. ⬇️

artículo científico publicado en 2008

Role of transposable elements in heterochromatin and epigenetic control

artículo científico publicado en 2004

SB Driver Analysis: a Sleeping Beauty cancer driver analysis framework for identifying and prioritizing experimentally actionable oncogenes and tumor suppressors

artículo científico publicado en 2018

SRBreak: A Read-Depth and Split-Read Framework to Identify Breakpoints of Different Events Inside Simple Copy-Number Variable Regions.

artículo científico publicado en 2016

Sensitivity of 70-mer oligonucleotides and cDNAs for microarray analysis of gene expression in Arabidopsis and its related species

artículo científico publicado en 2004

Sleeping Beauty mutagenesis reveals cooperating mutations and pathways in pancreatic adenocarcinoma

artículo científico publicado en 2012

Slow proliferation as a biological feature of colorectal cancer metastasis.

artículo científico publicado en 2009

Streptokinase antibodies in patients presenting with acute coronary syndrome in three rural New Zealand populations

artículo científico publicado en 2011

Stress, novel sex genes and epigenetic reprogramming orchestrate socially-controlled sex change

article

Stress, novel sex genes, and epigenetic reprogramming orchestrate socially controlled sex change

scientific article published on 10 July 2019

Striatal mRNA expression patterns underlying peak dose L-DOPA-induced dyskinesia in the 6-OHDA hemiparkinsonian rat. ⬇️

artículo científico publicado en 2016

Sugar-sweetened beverage consumption: a risk factor for prevalent gout with SLC2A9 genotype-specific effects on serum urate and risk of gout

artículo científico publicado en 2013

Sustained software development, not number of citations or journal choice, is indicative of accurate bioinformatic software

artículo científico publicado en 2022

T cell subpopulations in lymph nodes may not be predictive of patient outcome in colorectal cancer

artículo científico publicado en 2011

The CNVrd2 package: measurement of copy number at complex loci using high-throughput sequencing data

artículo científico publicado en 2014

The G protein-coupled receptor GPR30 inhibits proliferation of estrogen receptor-positive breast cancer cells.

artículo científico publicado en 2010

The Influence of Musculoskeletal Conditions, Behavioral Health Diagnoses, and Demographic Factors on Injury-Related Outcome in a High-Demand Population

artículo científico publicado en 2014

The chromosome 9p21.3 coronary heart disease risk allele is associated with altered gene expression in normal heart and vascular tissues

artículo científico publicado en 2012

The distribution and impact of common copy-number variation in the genome of the domesticated apple, Malus x domestica Borkh.

artículo científico publicado en 2015

The fibroblast growth factor-inducible 14 receptor is highly expressed in HER2-positive breast tumors and regulates breast cancer cell invasive capacity

artículo científico publicado en 2008

The power and promise of RNA-seq in ecology and evolution

artículo científico publicado en 2016

Transcriptomic analysis of the cardiac left ventricle in a rodent model of diabetic cardiomyopathy: molecular snapshot of a severe myocardial disease.

artículo científico

Transposon mutagenesis identifies cooperating genetic drivers during keratinocyte transformation and cutaneous squamous cell carcinoma progression

artículo científico publicado en 2019

Transposon mutagenesis identifies cooperating genetic drivers during keratinocyte transformation and cutaneous squamous cell carcinoma progression

artículo científico publicado en 2021

Transposon mutagenesis identifies genes that cooperate with mutant Pten in breast cancer progression.

artículo científico publicado en 2016

Transposon mutagenesis identifies genetic drivers of Braf(V600E) melanoma

artículo científico publicado en 2015

Transterm: a database to aid the analysis of regulatory sequences in mRNAs

artículo científico publicado en 2009

Tumor mutational burden is a determinant of immune-mediated survival in breast cancer

artículo científico publicado en 2018

Variable expression quantitative trait loci analysis of breast cancer risk variants

artículo científico publicado en 2021

Weight bias and linguistic body representation in anorexia nervosa: Findings from the BodyTalk project

artículo científico publicado en 2020

YB-1, the E2F pathway, and regulation of tumor cell growth

artículo científico publicado en 2011

graphsim: An R package for simulating gene expression data from graph structures of biological pathways

artículo científico publicado en 2020

∆133p53 isoform promotes tumour invasion and metastasis via interleukin-6 activation of JAK-STAT and RhoA-ROCK signalling

artículo científico publicado en 2018

Lista de obras de Mik Black

A Bayesian model for classifying all differentially expressed proteins simultaneously in 2D PAGE gels.

A New Role for ERα: Silencing via DNA Methylation of Basal, Stem Cell, and EMT Genes

A Predictor of Early Disease Recurrence in Patients With Breast Cancer Using a Cell-free RNA and Protein Liquid Biopsy

A bioinformatics workflow for detecting signatures of selection in genomic data

A collection of annotated and harmonized human breast cancer transcriptome datasets, including immunologic classification.

A proteomic approach identifies early pregnancy biomarkers for preeclampsia: novel linkages between a predisposition to preeclampsia and cardiovascular disease.

A statistical model to identify differentially expressed proteins in 2D PAGE gels

Abstract 1116: Sleeping Beauty mutagenesis identifies genes and pathways that cooperate with BrafV600E in melanoma initiation and progression

Accounting for Errors in Low Coverage High-Throughput Sequencing Data When Constructing Genetic Maps Using Biparental Outcrossed Populations.

Allosteric AKT Inhibitors Target Synthetic Lethal Vulnerabilities in E-Cadherin-Deficient Cells

Altered transcription of murine genes induced in the small bowel by administration of probiotic strain Lactobacillus rhamnosus HN001.

An altered pattern of circulating apolipoprotein E3 isoforms is implicated in preeclampsia

An iron regulatory gene signature predicts outcome in breast cancer.

Analysis of the DISC1 translocation partner (11q14.3) in genetic risk of schizophrenia

Analyzing tumor heterogeneity and driver genes in single myeloid leukemia cells with SBCapSeq

Association of SLC2A9 genotype with phenotypic variability of serum urate in pre-menopausal women

Bulk and Single-Cell Profiling of Breast Tumors Identifies TREM-1 as a Dominant Immune Suppressive Marker Associated With Poor Outcomes

CNVrd, a read-depth algorithm for assigning copy-number at the FCGR locus: population-specific tagging of copy number variation at FCGR3B

Calculation of the minimum number of replicate spots required for detection of significant gene expression fold change in microarray experiments

Circulating tumor DNA is a sensitive marker for routine monitoring of treatment response in advanced colorectal cancer

Clinical risk prediction for pre-eclampsia in nulliparous women: development of model in international prospective cohort

Clinico-pathological factors influencing lymph node yield in colorectal cancer and impact on survival: analysis of New Zealand Cancer Registry data

Combined genomic and phenotype screening reveals secretory factor SPINK1 as an invasion and survival factor associated with patient prognosis in breast cancer

Comparison of Roche Cell-Free DNA collection Tubes ® to Streck Cell-Free DNA BCT ® s for sample stability using healthy volunteers

Context-specific gene regulatory networks subdivide intrinsic subtypes of breast cancer

Control of the False Discovery Rate Applied to the Detection of Positively Selected Amino Acid Sites

Copy number variants implicate cardiac function and development pathways in earthquake-induced stress cardiomyopathy

Copy number variants implicate cardiac function and development pathways in earthquake-induced stress cardiomyopathy

Copy number variants in the sheep genome detected using multiple approaches

Cyclin E2 overexpression is associated with endocrine resistance but not insensitivity to CDK2 inhibition in human breast cancer cells.

Differential Gene Expression in Cultured Osteoblasts and Bone Marrow Stromal Cells From Patients With Paget's Disease of Bone

Distinctive subpopulations of stromal cells are present in human lymph nodes infiltrated with melanoma

Dual roles for immune metagenes in breast cancer prognosis and therapy prediction

Duration of sexual relationship and its effect on preeclampsia and small for gestational age perinatal outcome

E-cadherin loss alters cytoskeletal organization and adhesion in non-malignant breast cells but is insufficient to induce an epithelial-mesenchymal transition

E-cadherin-deficient cells have synthetic lethal vulnerabilities in plasma membrane organisation, dynamics and function

Early pregnancy prediction of preeclampsia in nulliparous women, combining clinical risk and biomarkers: the Screening for Pregnancy Endpoints (SCOPE) international cohort study.

Erratum to: JMJD6 is a driver of cellular proliferation and motility and a marker of poor prognosis in breast cancer

Estimating disease prevalence in the absence of a gold standard

Evaluating accuracy of diagnostic tests with intermediate results in the absence of a gold standard

Exploring possible DNA structures in real-time polymerase kinetics using Pacific Biosciences sequencer data

Fatty acid oxidation is associated with proliferation and prognosis in breast and other cancers

Frequency of CYP2C9 polymorphisms in Polynesian people and potential relevance to management of gout with benzbromarone

Functional impairment of infiltrating T cells in human colorectal cancer

Gene expression profiling of breast tumours from New Zealand patients

Genetic sex assignment in wild populations using GBS data: a statistical threshold approach.

Genome-wide methylation analysis identifies a core set of hypermethylated genes in CIMP-H colorectal cancer

Genomic selection of reference genes for real-time PCR in human myocardium

Germline mutations and somatic inactivation of TRIM28 in Wilms tumour.

Heterologous hybridisation to a Pinus microarray: profiling of gene expression in Pinus radiata saplings exposed to ethephon

High-Dimensional Mass Cytometric Analysis Reveals an Increase in Effector Regulatory T Cells as a Distinguishing Feature of Colorectal Tumors

Histological and transcriptomic effects of 17α-methyltestosterone on zebrafish gonad development

Identification of sex differences in zebrafish (Danio rerio) brains during early sexual differentiation and masculinisation using 17α-methyltestoterone

Immune gene signatures and tumor intrinsic markers delineate novel immunogenic subtypes of breast cancer

Immunogenic Subtypes of Breast Cancer Delineated by Gene Classifiers of Immune Responsiveness

Imprinted and ancient gene: a potential mediator of cancer cell survival during tryptophan deprivation

Increased gene expression variability in BRCA1-associated and basal-like breast tumours

Incremental cost-effectiveness ratio and incremental net-health benefit: two sides of the same coin

Inflammatory and regulatory T cells contribute to a unique immune microenvironment in tumor tissue of colorectal cancer patients.

Influence of age and site of disease on lymph node yield in colorectal cancer

Insertional mutagenesis defines drivers and evolutionary relationships in pancreatic cancer metastasis

Interactions between immunity, proliferation and molecular subtype in breast cancer prognosis

JMJD6 is a driver of cellular proliferation and motility and a marker of poor prognosis in breast cancer.

Lack of direct evidence for natural selection at the candidate thrifty gene locus, PPARGC1A

Large-scale transcriptome sequencing reveals novel expression patterns for key sex-related genes in a sex-changing fish.

Lentiviral-mediated gene transfer to the sheep brain: implications for gene therapy in Batten disease.

MelanomaDB: A Web Tool for Integrative Analysis of Melanoma Genomic Information to Identify Disease-Associated Molecular Pathways

Microarray-based gene set analysis: a comparison of current methods

Microarrays--analysis of signaling pathways

Microsatellite tandem repeats are abundant in human promoters and are associated with regulatory elements

Multimodal Assessment of Estrogen Receptor mRNA Profiles to Quantify Estrogen Pathway Activity in Breast Tumors

Multiple Gene Expression Classifiers from Different Array Platforms Predict Poor Prognosis of Colorectal Cancer

Mutations in genes encoding the cadherin receptor-ligand pair DCHS1 and FAT4 disrupt cerebral cortical development

Non-invasive assessment of epidermal genomic markers of UV exposure in skin

Oligonucleotide array outperforms SNP array on formalin-fixed paraffin-embedded clinical samples

Paternal contribution to small for gestational age babies: a multicenter prospective study

Predicting clinical outcome through molecular profiling in stage III melanoma

Prediction of preeclampsia and delivery of small for gestational age babies based on a combination of clinical risk factors in high-risk women

Prognostic roles for IL-2-producing and CD69 T cell subsets in colorectal cancer patients