Lista de obras - Cheong Xin Chan - Dominio Público Uruguay

A genomic view of the reef-building coral Porites lutea and its microbial symbionts

artículo científico publicado en 2019

A new species of Burkholderia isolated from sugarcane roots promotes plant growth

artículo científico publicado en 2013

A phylogenomic approach for studying plastid endosymbiosis.

artículo científico publicado en 2008

A word-oriented approach to alignment validation

artículo científico

ANALYSIS OF ALEXANDRIUM TAMARENSE (DINOPHYCEAE) GENES REVEALS THE COMPLEX EVOLUTIONARY HISTORY OF A MICROBIAL EUKARYOTE().

artículo científico publicado en 2012

Active host response to algal symbionts in the sea slug Elysia chlorotica.

artículo científico publicado en 2018

Alignment-free microbial phylogenomics under scenarios of sequence divergence, genome rearrangement and lateral genetic transfer

artículo científico publicado en 2016

Analysis of Porphyra membrane transporters demonstrates gene transfer among photosynthetic eukaryotes and numerous sodium-coupled transport systems

artículo científico publicado en 2012

Analysis of horizontal genetic transfer in red algae in the post-genomics age.

artículo científico publicado en 2013

Analysis of the draft genome of the red seaweed Gracilariopsis chorda provides insights into genome size evolution in Rhodophyta.

artículo científico publicado en 2018

Are protein domains modules of lateral genetic transfer?

artículo científico publicado en 2009

Biological Intuition in Alignment-Free Methods: Response to Posada

article

Biotic interactions as drivers of algal origin and evolution.

artículo científico publicado en 2017

Building Consensus around the Assessment and Interpretation of Symbiodiniaceae Diversity

Clustering evolving proteins into homologous families

artículo científico publicado en 2013

Commonly misunderstood parameters of NCBI BLAST and important considerations for users

scientific article published on 01 August 2019

Comparison of 15 dinoflagellate genomes reveals extensive sequence and structural divergence in family Symbiodiniaceae and genus Symbiodinium

artículo científico publicado en 2021

Core genes in diverse dinoflagellate lineages include a wealth of conserved dark genes with unknown functions

artículo científico publicado en 2018

Cyanophora paradoxa Genome Elucidates Origin of Photosynthesis in Algae and Plants

artículo científico publicado en 2012

Deciphering the nature of the coral-Chromera association

artículo científico publicado en 2018

Detecting recombination in evolving nucleotide sequences

artículo científico publicado en 2006

Dual RNA-seq analyses of a coral and its native symbiont during the establishment of symbiosis

scientific article published on 27 August 2020

Endosymbiotic and horizontal gene transfer in microbial eukaryotes: Impacts on cell evolution and the tree of life

artículo científico publicado en 2012

Erratum: Publisher Correction: genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis

artículo científico publicado en 2018

Evidence That Inconsistent Gene Prediction Can Mislead Analysis of Dinoflagellate Genomes

artículo científico publicado en 2020

Evidence for widespread exonic small RNAs in the glaucophyte alga Cyanophora paradoxa

artículo científico publicado en 2013

Foreign gene recruitment to the fatty acid biosynthesis pathway in diatoms.

artículo científico publicado en 2013

Genome Evolution of Coral Reef Symbionts as Intracellular Residents

scientific article published on 10 May 2019

Genome of the red alga Porphyridium purpureum

artículo científico publicado en 2013

Genomes of the dinoflagellate Polarella glacialis encode tandemly repeated single-exon genes with adaptive functions

scientific article published on 24 May 2020

Improved Cladocopium goreaui Genome Assembly Reveals Features of a Facultative Coral Symbiont and the Complex Evolutionary History of Dinoflagellate Genes

artículo científico publicado en 2022

Inferring phylogenies of evolving sequences without multiple sequence alignment.

artículo científico publicado en 2014

Insights into the red algae and eukaryotic evolution from the genome of Porphyra umbilicalis (Bangiophyceae, Rhodophyta)

artículo científico publicado en 2017

Lateral Transfer of Genes and Gene Fragments in Staphylococcus Extends beyond Mobile Elements ⬇️

artículo científico publicado el 27 de mayo de 2011

Lateral transfer of genes and gene fragments in prokaryotes

artículo científico publicado en 2009

MAJOR DEVELOPMENTAL REGULATORS AND THEIR EXPRESSION IN TWO CLOSELY RELATED SPECIES OF PORPHYRA (RHODOPHYTA)(1).

artículo científico publicado en 2012

Molecular phylogenetics before sequences: oligonucleotide catalogs as k-mer spectra

artículo científico publicado en 2014

Next-generation phylogenomics

artículo científico publicado en 2013

Non-random sharing of Plantae genes

artículo científico publicado en 2011

PhySortR: a fast, flexible tool for sorting phylogenetic trees in R.

artículo científico publicado en 2016

Plastid origin and evolution: new models provide insights into old problems

artículo científico publicado en 2011

Plastid phylogenomics with broad taxon sampling further elucidates the distinct evolutionary origins and timing of secondary green plastids

artículo científico publicado en 2018

Porphyra (Bangiophyceae) Transcriptomes Provide Insights Into Red Algal Development And Metabolism

artículo científico publicado en 2012

Recapitulating phylogenies using k-mers: from trees to networks

artículo científico publicado en 2016

Red and green algal monophyly and extensive gene sharing found in a rich repertoire of red algal genes

artículo científico publicado en 2011

Red and green algal origin of diatom membrane transporters: insights into environmental adaptation and cell evolution

artículo científico publicado en 2011

Scaling Up the Phylogenetic Detection of Lateral Gene Transfer Events.

artículo científico publicado en 2017

Selection of reference genes for transcript profiling of <i>Sargassum polycystum</i> by quantitative real‐time polymerase chain reaction

artículo científico publicado en 2018

Signatures of adaptation and symbiosis in genomes and transcriptomes of Symbiodinium.

artículo científico publicado en 2017

Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis

article published in 2018

Symbiodiniumgenomes reveal adaptive evolution of functions related to symbiosis

The Algal Revolution

artículo científico publicado en 2017

The transcriptomic response of the coral Acropora digitifera to a competent Symbiodinium strain: the symbiosome as an arrested early phagosome.

artículo científico publicado en 2016

Trends in seaweed research

artículo científico publicado en 2006

Whole-genome duplication in an algal symbiont bolsters coral heat tolerance

artículo científico publicado en 2024

k-mer Similarity, Networks of Microbial Genomes, and Taxonomic Rank

scientific article published on 20 November 2018

Lista de obras de Cheong Xin Chan

A genomic view of the reef-building coral Porites lutea and its microbial symbionts

A new species of Burkholderia isolated from sugarcane roots promotes plant growth

A phylogenomic approach for studying plastid endosymbiosis.

A word-oriented approach to alignment validation

ANALYSIS OF ALEXANDRIUM TAMARENSE (DINOPHYCEAE) GENES REVEALS THE COMPLEX EVOLUTIONARY HISTORY OF A MICROBIAL EUKARYOTE().

Active host response to algal symbionts in the sea slug Elysia chlorotica.

Alignment-free microbial phylogenomics under scenarios of sequence divergence, genome rearrangement and lateral genetic transfer

Analysis of Porphyra membrane transporters demonstrates gene transfer among photosynthetic eukaryotes and numerous sodium-coupled transport systems

Analysis of horizontal genetic transfer in red algae in the post-genomics age.

Analysis of the draft genome of the red seaweed Gracilariopsis chorda provides insights into genome size evolution in Rhodophyta.

Are protein domains modules of lateral genetic transfer?

Biological Intuition in Alignment-Free Methods: Response to Posada

Biotic interactions as drivers of algal origin and evolution.

Building Consensus around the Assessment and Interpretation of Symbiodiniaceae Diversity

Clustering evolving proteins into homologous families

Commonly misunderstood parameters of NCBI BLAST and important considerations for users

Comparison of 15 dinoflagellate genomes reveals extensive sequence and structural divergence in family Symbiodiniaceae and genus Symbiodinium

Core genes in diverse dinoflagellate lineages include a wealth of conserved dark genes with unknown functions

Cyanophora paradoxa Genome Elucidates Origin of Photosynthesis in Algae and Plants

Deciphering the nature of the coral-Chromera association

Detecting recombination in evolving nucleotide sequences

Dual RNA-seq analyses of a coral and its native symbiont during the establishment of symbiosis

Endosymbiotic and horizontal gene transfer in microbial eukaryotes: Impacts on cell evolution and the tree of life

Erratum: Publisher Correction: genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis

Evidence That Inconsistent Gene Prediction Can Mislead Analysis of Dinoflagellate Genomes

Evidence for widespread exonic small RNAs in the glaucophyte alga Cyanophora paradoxa

Foreign gene recruitment to the fatty acid biosynthesis pathway in diatoms.

Genome Evolution of Coral Reef Symbionts as Intracellular Residents

Genome of the red alga Porphyridium purpureum

Genomes of the dinoflagellate Polarella glacialis encode tandemly repeated single-exon genes with adaptive functions

Improved Cladocopium goreaui Genome Assembly Reveals Features of a Facultative Coral Symbiont and the Complex Evolutionary History of Dinoflagellate Genes

Inferring phylogenies of evolving sequences without multiple sequence alignment.

Insights into the red algae and eukaryotic evolution from the genome of Porphyra umbilicalis (Bangiophyceae, Rhodophyta)

Lateral Transfer of Genes and Gene Fragments in Staphylococcus Extends beyond Mobile Elements ⬇️

Lateral transfer of genes and gene fragments in prokaryotes

MAJOR DEVELOPMENTAL REGULATORS AND THEIR EXPRESSION IN TWO CLOSELY RELATED SPECIES OF PORPHYRA (RHODOPHYTA)(1).

Molecular phylogenetics before sequences: oligonucleotide catalogs as k-mer spectra

Next-generation phylogenomics

Non-random sharing of Plantae genes

PhySortR: a fast, flexible tool for sorting phylogenetic trees in R.

Plastid origin and evolution: new models provide insights into old problems

Plastid phylogenomics with broad taxon sampling further elucidates the distinct evolutionary origins and timing of secondary green plastids

Porphyra (Bangiophyceae) Transcriptomes Provide Insights Into Red Algal Development And Metabolism

Recapitulating phylogenies using k-mers: from trees to networks

Red and green algal monophyly and extensive gene sharing found in a rich repertoire of red algal genes

Red and green algal origin of diatom membrane transporters: insights into environmental adaptation and cell evolution

Scaling Up the Phylogenetic Detection of Lateral Gene Transfer Events.

Selection of reference genes for transcript profiling of <i>Sargassum polycystum</i> by quantitative real‐time polymerase chain reaction

Signatures of adaptation and symbiosis in genomes and transcriptomes of Symbiodinium.

Symbiodinium genomes reveal adaptive evolution of functions related to coral-dinoflagellate symbiosis

Symbiodiniumgenomes reveal adaptive evolution of functions related to symbiosis

The Algal Revolution

The transcriptomic response of the coral Acropora digitifera to a competent Symbiodinium strain: the symbiosome as an arrested early phagosome.

Trends in seaweed research

Whole-genome duplication in an algal symbiont bolsters coral heat tolerance

k-mer Similarity, Networks of Microbial Genomes, and Taxonomic Rank