Lista de obras - Zhandong Liu - Dominio Público Uruguay

A Local Poisson Graphical Model for inferring networks from sequencing data

artículo científico publicado en 2013

A Role for Progesterone-Regulated sFRP4 Expression in Uterine Leiomyomas.

artículo científico publicado en 2017

A drosophila genetic resource of mutants to study mechanisms underlying human genetic diseases

scientific journal article

A kinome-wide RNAi screen identifies ERK2 as a druggable regulator of Shank3 stability

artículo científico publicado en 2019

ATXN1-CIC Complex Is the Primary Driver of Cerebellar Pathology in Spinocerebellar Ataxia Type 1 through a Gain-of-Function Mechanism.

artículo científico publicado en 2018

An autism-linked missense mutation in SHANK3 reveals the modularity of Shank3 function

artículo científico publicado en 2019

Antisense oligonucleotide therapy in a humanized mouse model of <i>MECP2</i> duplication syndrome

artículo científico publicado en 2021

Apparent bias toward long gene misregulation in MeCP2 syndromes disappears after controlling for baseline variations

artículo científico publicado en 2018

Asbestos exposure, pleural mesothelioma, and serum osteopontin levels

scientific article published on 01 October 2005

Beta-binomial modeling of CRISPR pooled screen data identifies target genes with greater sensitivity and fewer false negatives

scientific article published on 23 April 2019

CRISPRcloud: A secure cloud-based pipeline for CRISPR pooled screen deconvolution

artículo científico publicado en 2017

Coexpression enrichment analysis at the single-cell level reveals convergent defects in neural progenitor cells and their cell-type transitions in neurodevelopmental disorders

artículo científico publicado en 2020

Combinatorial therapy discovery using mixed integer linear programming

artículo científico publicado en 2014

Comprehensive evaluation of RNA-seq quantification methods for linearity

artículo científico publicado en 2017

Crowdsourced estimation of cognitive decline and resilience in Alzheimer's disease

artículo científico publicado en 2016

Data Analysis Pipeline for RNA-seq Experiments: From Differential Expression to Cryptic Splicing.

artículo científico publicado en 2017

Detecting hidden batch factors through data-adaptive adjustment for biological effects

artículo científico publicado en 2018

Digital sorting of complex tissues for cell type-specific gene expression profiles

artículo científico publicado en 2013

Disease-related gene module detection based on a multi-label propagation clustering algorithm.

artículo científico publicado en 2017

Expression and functional pathway analysis of nuclear receptor NR2F2 in ovarian cancer

artículo científico publicado en 2013

Extensive cryptic splicing upon loss of RBM17 and TDP43 in neurodegeneration models

artículo científico publicado en 2016

FOXG1 expression shows correlation with neuronal differentiation in cerebellar development, aggressive phenotype in medulloblastomas, and survival in a xenograft model of medulloblastoma.

artículo científico publicado en 2015

Forniceal deep brain stimulation induces gene expression and splicing changes that promote neurogenesis and plasticity.

artículo científico publicado en 2018

Gene expression deconvolution in linear space

artículo científico publicado en 2011

Gene expression profiles predict survival and progression of pleural mesothelioma.

artículo científico publicado en 2004

Genome-wide distribution of linker histone H1.0 is independent of MeCP2

artículo científico publicado en 2018

High-Throughput Functional Analysis Distinguishes Pathogenic, Nonpathogenic, and Compensatory Transcriptional Changes in Neurodegeneration

artículo científico publicado en 2018

Human-specific regulation of MeCP2 levels in fetal brains by microRNA miR-483-5p

artículo científico publicado en 2013

Loss of Capicua alters early T cell development and predisposes mice to T cell lymphoblastic leukemia/lymphoma

artículo científico publicado en 2018

Loss of MeCP2 in the rat models regression, impaired sociability and transcriptional deficits of Rett syndrome.

artículo científico publicado en 2016

MARRVEL: Integration of Human and Model Organism Genetic Resources to Facilitate Functional Annotation of the Human Genome

artículo científico publicado en 2017

Mechanisms of FUS1/TUSC2 deficiency in mesothelioma and its tumorigenic transcriptional effects.

artículo científico publicado en 2009

Molecular pathway identification using biological network-regularized logistic models

artículo científico publicado en 2013

Molecular profiling predicts meningioma recurrence and reveals loss of DREAM complex repression in aggressive tumors

artículo científico publicado en 2019

NLRP7 affects trophoblast lineage differentiation, binds to overexpressed YY1 and alters CpG methylation

artículo científico publicado en 2013

Nuclear matrix association of the human beta-globin locus utilizing a novel approach to quantitative real-time PCR

artículo científico publicado en 2003

On the reproducibility of TCGA ovarian cancer microRNA profiles

artículo científico publicado en 2014

Otud7a Knockout Mice Recapitulate Many Neurological Features of 15q13.3 Microdeletion Syndrome

artículo científico publicado en 2018

POU6f1 Mediates Neuropeptide-Dependent Plasticity in the Adult Brain.

artículo científico publicado en 2018

Post-transcriptional regulation of SHANK3 expression by microRNAs related to multiple neuropsychiatric disorders

artículo científico publicado en 2015

Region-specific denoising identifies spatial co-expression patterns and intra-tissue heterogeneity in spatially resolved transcriptomics data

artículo científico publicado en 2022

Reversal of phenotypes in MECP2 duplication mice using genetic rescue or antisense oligonucleotides

artículo científico publicado en 2015

Sequence space coverage, entropy of genomes and the potential to detect non-human DNA in human samples

artículo científico publicado en 2008

Serine catabolism regulates mitochondrial redox control during hypoxia

artículo científico publicado en 2014

Singular value decomposition-based regression identifies activation of endogenous signaling pathways in vivo

artículo científico publicado en 2008

Stress detection using deep neural networks

artículo científico publicado en 2020

TCGA2STAT: simple TCGA data access for integrated statistical analysis in R.

artículo científico publicado en 2015

Tau Activates Transposable Elements in Alzheimer's Disease

artículo científico publicado en 2018

The International Conference on Intelligent Biology and Medicine (ICIBM) 2016: from big data to big analytical tools

artículo científico publicado en 2017

The International Conference on Intelligent Biology and Medicine (ICIBM) 2016: summary and innovation in genomics

artículo científico publicado en 2017

The Snf1-related kinase, Hunk, is essential for mammary tumor metastasis

artículo científico publicado en 2009

Transcriptomic Analysis of Mouse Cochlear Supporting Cell Maturation Reveals Large-Scale Changes in Notch Responsiveness Prior to the Onset of Hearing.

artículo científico publicado en 2016

Unravelling spatial gene associations with SEAGAL: a Python package for spatial transcriptomics data analysis and visualization

artículo científico publicado en 2023

XMRF: an R package to fit Markov Networks to high-throughput genetics data.

artículo científico publicado en 2016

Lista de obras de Zhandong Liu

A Local Poisson Graphical Model for inferring networks from sequencing data

A Role for Progesterone-Regulated sFRP4 Expression in Uterine Leiomyomas.

A drosophila genetic resource of mutants to study mechanisms underlying human genetic diseases

A kinome-wide RNAi screen identifies ERK2 as a druggable regulator of Shank3 stability

ATXN1-CIC Complex Is the Primary Driver of Cerebellar Pathology in Spinocerebellar Ataxia Type 1 through a Gain-of-Function Mechanism.

An autism-linked missense mutation in SHANK3 reveals the modularity of Shank3 function

Antisense oligonucleotide therapy in a humanized mouse model of <i>MECP2</i> duplication syndrome

Apparent bias toward long gene misregulation in MeCP2 syndromes disappears after controlling for baseline variations

Asbestos exposure, pleural mesothelioma, and serum osteopontin levels

Beta-binomial modeling of CRISPR pooled screen data identifies target genes with greater sensitivity and fewer false negatives

CRISPRcloud: A secure cloud-based pipeline for CRISPR pooled screen deconvolution

Coexpression enrichment analysis at the single-cell level reveals convergent defects in neural progenitor cells and their cell-type transitions in neurodevelopmental disorders

Combinatorial therapy discovery using mixed integer linear programming

Comprehensive evaluation of RNA-seq quantification methods for linearity

Crowdsourced estimation of cognitive decline and resilience in Alzheimer's disease

Data Analysis Pipeline for RNA-seq Experiments: From Differential Expression to Cryptic Splicing.

Detecting hidden batch factors through data-adaptive adjustment for biological effects

Digital sorting of complex tissues for cell type-specific gene expression profiles

Disease-related gene module detection based on a multi-label propagation clustering algorithm.

Expression and functional pathway analysis of nuclear receptor NR2F2 in ovarian cancer

Extensive cryptic splicing upon loss of RBM17 and TDP43 in neurodegeneration models

FOXG1 expression shows correlation with neuronal differentiation in cerebellar development, aggressive phenotype in medulloblastomas, and survival in a xenograft model of medulloblastoma.

Forniceal deep brain stimulation induces gene expression and splicing changes that promote neurogenesis and plasticity.

Gene expression deconvolution in linear space

Gene expression profiles predict survival and progression of pleural mesothelioma.

Genome-wide distribution of linker histone H1.0 is independent of MeCP2

High-Throughput Functional Analysis Distinguishes Pathogenic, Nonpathogenic, and Compensatory Transcriptional Changes in Neurodegeneration

Human-specific regulation of MeCP2 levels in fetal brains by microRNA miR-483-5p

Loss of Capicua alters early T cell development and predisposes mice to T cell lymphoblastic leukemia/lymphoma

Loss of MeCP2 in the rat models regression, impaired sociability and transcriptional deficits of Rett syndrome.

MARRVEL: Integration of Human and Model Organism Genetic Resources to Facilitate Functional Annotation of the Human Genome

Mechanisms of FUS1/TUSC2 deficiency in mesothelioma and its tumorigenic transcriptional effects.

Molecular pathway identification using biological network-regularized logistic models

Molecular profiling predicts meningioma recurrence and reveals loss of DREAM complex repression in aggressive tumors

NLRP7 affects trophoblast lineage differentiation, binds to overexpressed YY1 and alters CpG methylation

Nuclear matrix association of the human beta-globin locus utilizing a novel approach to quantitative real-time PCR

On the reproducibility of TCGA ovarian cancer microRNA profiles

Otud7a Knockout Mice Recapitulate Many Neurological Features of 15q13.3 Microdeletion Syndrome

POU6f1 Mediates Neuropeptide-Dependent Plasticity in the Adult Brain.

Post-transcriptional regulation of SHANK3 expression by microRNAs related to multiple neuropsychiatric disorders

Region-specific denoising identifies spatial co-expression patterns and intra-tissue heterogeneity in spatially resolved transcriptomics data

Reversal of phenotypes in MECP2 duplication mice using genetic rescue or antisense oligonucleotides

Sequence space coverage, entropy of genomes and the potential to detect non-human DNA in human samples

Serine catabolism regulates mitochondrial redox control during hypoxia

Singular value decomposition-based regression identifies activation of endogenous signaling pathways in vivo

Stress detection using deep neural networks

TCGA2STAT: simple TCGA data access for integrated statistical analysis in R.

Tau Activates Transposable Elements in Alzheimer's Disease

The International Conference on Intelligent Biology and Medicine (ICIBM) 2016: from big data to big analytical tools

The International Conference on Intelligent Biology and Medicine (ICIBM) 2016: summary and innovation in genomics

The Snf1-related kinase, Hunk, is essential for mammary tumor metastasis

Transcriptomic Analysis of Mouse Cochlear Supporting Cell Maturation Reveals Large-Scale Changes in Notch Responsiveness Prior to the Onset of Hearing.

Unravelling spatial gene associations with SEAGAL: a Python package for spatial transcriptomics data analysis and visualization

XMRF: an R package to fit Markov Networks to high-throughput genetics data.