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Lista de obras de Charles Y Chiu

2291. A Real-Time Sequencing Approach for Simultaneous Metagenomic and Transcriptomic-Based Diagnosis of Infectious Diseases

article by Benjamin Briggs et al published November 2018 in Open Forum Infectious Diseases

236. The Comparative Utility Of Metagenomic Next-Generation Sequencing and Universal PCR for Pathogen Detection on Cerebrospinal Fluid: A Retrospective Analysis From a Tertiary Care Center

artículo científico publicado en 2019

2563. Clinical Metagenomic Next-Generation Sequencing for Diagnosis of Meningitis and Encephalitis

617. Characterization and Development of the Infant Gut Virome: A STORK Study

article

A Child With Intermittent Headaches and Eosinophilic Meningitis.

artículo científico publicado en 2018

A Genomic Survey of SARS-CoV-2 Reveals Multiple Introductions into Northern California without a Predominant Lineage

artículo científico publicado en 2020

A SARS-CoV-2 serological assay to determine the presence of blocking antibodies that compete for human ACE2 binding

artículo científico publicado en 2020

A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples

artículo científico publicado en 2014

A metagenomic analysis of pandemic influenza A (2009 H1N1) infection in patients from North America

artículo científico publicado en 2010

A mouse model of paralytic myelitis caused by enterovirus D68.

artículo científico publicado en 2017

A novel adenovirus species associated with an acute respiratory outbreak in a baboon colony and evidence of coincident human infection

artículo científico publicado en 2013

A novel bocavirus in canine liver

artículo científico publicado en 2013

A novel outbreak enterovirus D68 strain associated with acute flaccid myelitis cases in the USA (2012-14): a retrospective cohort study.

artículo científico publicado en 2015

A novel rhabdovirus associated with acute hemorrhagic fever in central Africa

artículo científico publicado en 2012

Actionable diagnosis of neuroleptospirosis by next-generation sequencing

artículo científico publicado en 2014

Acute Flaccid Myelitis of Unknown Etiology in California, 2012-2015.

artículo científico publicado en 2015

Acute Liver Failure of Indeterminate Etiology: A Comprehensive Systematic Approach by An Expert Committee to Establish Causality

artículo científico publicado en 2018

Acute Zika virus infection in an asymptomatic blood donor at the onset of the Puerto Rico epidemic

scientific article published on 13 August 2019

An ensemble strategy that significantly improves de novo assembly of microbial genomes from metagenomic next-generation sequencing data

artículo científico publicado en 2015

Antibodies to the Novel Human Pegivirus 2 Are Associated with Active and Resolved Infections

artículo científico publicado en 2016

Association of COVID-19 Infections in San Francisco in Early March 2020 with Travel to New York and Europe

artículo científico publicado en 2020

Associations of Early COVID-19 Cases in San Francisco with Domestic and International Travel

artículo científico publicado en 2020

Author Correction: Efficacy of an inactivated Zika vaccine against virus infection during pregnancy in mice and marmosets

artículo científico publicado en 2022

Author Correction: Metagenomic sequencing with spiked primer enrichment for viral diagnostics and genomic surveillance

scientific article published on 01 March 2020

Bacteriologic features of surgical site infections following breast surgery

artículo científico publicado en 2009

Bas-Congo Virus

article from 2014

Bas-Congo virus: another deadly virus?

artículo científico publicado en 2013

Beatrice Hill Virus Represents a Novel Species in the Genus Tibrovirus (Mononegavirales: Rhabdoviridae).

scientific article published on 26 January 2017

COVID-19 Variant Detection with a High-Fidelity CRISPR-Cas12 Enzyme

artículo científico publicado en 2022

CRISPR-Cas12-based detection of SARS-CoV-2

scientific article published on 16 April 2020

Characterization of the Bas-Congo virus glycoprotein and its function in pseudotyped viruses

artículo científico publicado en 2013

Clinical Metagenomic Next-Generation Sequencing for Pathogen Detection

Clinical Metagenomic Sequencing for Diagnosis of Meningitis and Encephalitis

artículo científico publicado en 2019

Clinical Outcomes and Serologic Response in Solid Organ Transplant Recipients with COVID-19: A Case Series from the United States

artículo científico publicado en 2020

Clinical Utility of Unbiased Metagenomic Next-Generation Sequencing in Diagnosis of Acute Infectious Diseases: A Prospective Case Series

artículo científico publicado en 2015

Clinical features, diagnostics, and outcomes of patients presenting with acute respiratory illness: a comparison of patients with and without COVID-19

artículo científico publicado en 2020

Clinical metagenomic identification of Balamuthia mandrillaris encephalitis and assembly of the draft genome: the continuing case for reference genome sequencing

artículo científico publicado en 2015

Clinical metagenomics

scientific article published on 01 June 2019

Coinfections of Zika and Chikungunya Viruses in Bahia, Brazil, Identified by Metagenomic Next-Generation Sequencing

artículo científico publicado en 2016

Competitive SARS-CoV-2 Serology Reveals Most Antibodies Targeting the Spike Receptor-Binding Domain Compete for ACE2 Binding

scientific article published on 16 September 2020

Complete genome sequence of sequential Pandoraea apista isolates from the same cystic fibrosis patient supports a model of chronic colonization with in vivo strain evolution over time

artículo científico publicado en 2016

Concerns over the origin of NIH-CQV, a novel virus discovered in Chinese patients with seronegative hepatitis

artículo científico publicado en 2014

Correction: A Novel Rhabdovirus Associated with Acute Hemorrhagic Fever in Central Africa

artículo científico publicado en 2016

Correction: Correction: A Novel Rhabdovirus Associated with Acute Hemorrhagic Fever in Central Africa

artículo científico publicado en 2017

Correction: Cross-Species Transmission of a Novel Adenovirus Associated with a Fulminant Pneumonia Outbreak in a New World Monkey Colony

Correction: Cross-Species Transmission of a Novel Adenovirus Associated with a Fulminant Pneumonia Outbreak in a New World Monkey Colony.

artículo científico publicado en 2011

Cross-species transmission of a novel adenovirus associated with a fulminant pneumonia outbreak in a new world monkey colony

artículo científico publicado en 2011

Cryo-EM imaging of the catalytic subunit of the DNA-dependent protein kinase

artículo científico publicado en 1998

Cryo-EM visualization of an exposed RGD epitope on adenovirus that escapes antibody neutralization

artículo científico publicado en 1997

Cryptic transmission of SARS-CoV-2 in Washington State

artículo científico publicado en 2020

Cryptic transmission of SARS-CoV-2 in Washington state

scientific article published on 10 September 2020

Cultivation and serological characterization of a human Theiler's-like cardiovirus associated with diarrheal disease

artículo científico publicado en 2010

Cutting-Edge Infectious Disease Diagnostics with CRISPR

artículo científico publicado en 2018

DNA microarray for detection of gastrointestinal viruses.

artículo científico publicado en 2014

Diagnosis of Fatal Human Case of St. Louis Encephalitis Virus Infection by Metagenomic Sequencing, California, 2016.

artículo científico publicado en 2017

Diagnosis of a critical respiratory illness caused by human metapneumovirus by use of a pan-virus microarray

artículo científico publicado en 2007

Diagnosis of neuroinvasive astrovirus infection in an immunocompromised adult with encephalitis by unbiased next-generation sequencing

artículo científico publicado en 2015

Differentiation enhances Zika virus infection of neuronal brain cells

artículo científico publicado en 2018

Digitally collected cryo-electron micrographs for single particle reconstruction

artículo científico publicado en 2000

Direct Comparison of SARS-CoV-2 Analytical Limits of Detection across Seven Molecular Assays

artículo científico publicado en 2020

Discovery of a Novel Human Pegivirus in Blood Associated with Hepatitis C Virus Co-Infection

artículo científico publicado en 2015

Discovery of a novel polyomavirus in acute diarrheal samples from children

artículo científico publicado en 2012

Discovery of a persistent Zika virus lineage in Bahia, Brazil

article

Distinct Zika Virus Lineage in Salvador, Bahia, Brazil

artículo científico publicado en 2016

Draft Genome Sequence of Mycobacterium arupense Strain GUC1.

artículo científico publicado en 2015

Draft Genome Sequence of Mycobacterium elephantis Strain Lipa

artículo científico publicado en 2015

Draft Genome Sequence of Mycobacterium heckeshornense Strain RLE.

artículo científico publicado en 2015

Draft Genome Sequence of Mycobacterium heraklionense Strain Davo

artículo científico publicado en 2015

Draft Genome Sequence of Mycobacterium obuense Strain UC1, Isolated from Patient Sputum

artículo científico publicado en 2015

E-Predict: a computational strategy for species identification based on observed DNA microarray hybridization patterns

artículo científico publicado en 2005

Epidemic establishment and cryptic transmission of Zika virus in Brazil and the Americas

artículo científico publicado en 2017

Epidemiological and genomic characterization of community-acquired Clostridium difficile infections

artículo científico publicado en 2018

Erratum to: Clinical metagenomic identification of Balamuthia mandrillaris encephalitis and assembly of the draft genome: the continuing case for reference genome sequencing

artículo científico publicado en 2016

Establishment and characterization of an oral tongue squamous cell carcinoma cell line from a never-smoking patient

artículo científico publicado en 2017

Evaluation of SARS-CoV-2 serology assays reveals a range of test performance

artículo científico publicado en 2020

Experimental Zika Virus Infection in a New World Monkey Model Reproduces Key Features of the Human Disease

artículo científico publicado en 2017

Experimental Zika Virus Infection in the Pregnant Common Marmoset Induces Spontaneous Fetal Loss and Neurodevelopmental Abnormalities

scholarly article published 4 February 2018

Experimental Zika Virus Infection in the Pregnant Common Marmoset Induces Spontaneous Fetal Loss and Neurodevelopmental Abnormalities.

artículo científico publicado en 2018

Experimental Zika Virus Inoculation in a New World Monkey Model Reproduces Key Features of the Human Infection

artículo científico publicado en 2017

Experimental cross-species infection of common marmosets by titi monkey adenovirus

artículo científico publicado en 2013

Exploratory analysis of the potential for advanced diagnostic testing to reduce healthcare expenditures of patients hospitalized with meningitis or encephalitis

scientific article published on 15 January 2020

First Complete Genome Sequence of Corynebacterium riegelii.

artículo científico publicado en 2017

First Draft Genome Sequences of Neisseria sp. Strain 83E34 and Neisseria sp. Strain 74A18, Previously Identified as CDC Eugonic Fermenter 4b Species.

artículo científico publicado en 2016

Gastroenteritis, Hepatitis, Encephalopathy, and Human Herpesvirus 6 Detection in an Immunocompetent Child: Benefits and Risks of Syndromic Multiplex Molecular Panel Testing

artículo científico publicado en 2019

Genome Sequence of Bivens Arm Virus, a Tibrovirus Belonging to the Species Tibrogargan virus (Mononegavirales: Rhabdoviridae)

artículo científico publicado en 2015

Genomic Assays for Identification of Chikungunya Virus in Blood Donors, Puerto Rico, 2014.

artículo científico publicado en 2015

Genomic Epidemiology Reconstructs the Introduction and Spread of Zika Virus in Central America and Mexico.

artículo científico publicado en 2018

Genomic surveillance reveals multiple introductions of SARS-CoV-2 into Northern California ⬇️

artículo científico publicado en 2020

Hepatitis E Virus-Associated Meningoencephalitis in a Lung Transplant Recipient Diagnosed by Clinical Metagenomic Sequencing

artículo científico publicado en 2017

Human Tibroviruses: Commensals or Lethal Pathogens?

scientific article published on 25 February 2020

Human, Nonhuman Primate, and Bat Cells Are Broadly Susceptible to Tibrovirus Particle Cell Entry

artículo científico publicado en 2019

Identification of cardioviruses related to Theiler's murine encephalomyelitis virus in human infections.

artículo científico publicado en 2008

Identification of high-risk human papillomavirus and Rb/E2F pathway genomic alterations in mutually exclusive subsets of colorectal neuroendocrine carcinoma

artículo científico publicado en 2018

Idiopathic pneumonia syndrome after hematopoietic cell transplantation: evidence of occult infectious etiologies

artículo científico publicado en 2015

In-depth investigation of archival and prospectively collected samples reveals no evidence for XMRV infection in prostate cancer

artículo científico publicado en 2012

Integrating host response and unbiased microbe detection for lower respiratory tract infection diagnosis in critically ill adults

article published in the Proceedings of the National Academy of Sciences of the United States of America

LB14. Cerebrospinal Fluid Profiling of the Human Host Response Reveals Species-Specific Enterovirus Biosignatures in Acute Flaccid Myelitis Cases

artículo científico publicado en 2019

Laboratory validation of a clinical metagenomic sequencing assay for pathogen detection in cerebrospinal fluid

artículo científico publicado en 2019

Laser electron accelerators for radiation medicine: a feasibility study.

artículo científico publicado en 2004

List of Contributors

Longitudinal Transcriptome Analysis Reveals a Sustained Differential Gene Expression Signature in Patients Treated for Acute Lyme Disease

artículo científico publicado en 2016

Metagenomic Next-Generation Sequencing of the 2014 Ebola Virus Disease Outbreak in the Democratic Republic of the Congo

scientific article published on 26 August 2019

Metagenomic Sequencing Detects Respiratory Pathogens in Hematopoietic Cellular Transplant Patients

artículo científico publicado en 2017

Metagenomic sequencing with spiked primer enrichment for viral diagnostics and genomic surveillance

scientific article published on 13 January 2020

Metagenomic-based Surveillance of Pacific Coast tick Dermacentor occidentalis Identifies Two Novel Bunyaviruses and an Emerging Human Ricksettsial Pathogen.

artículo científico publicado en 2017

Metagenomics for the discovery of novel human viruses

artículo científico publicado en 2010

Microarray detection of human parainfluenzavirus 4 infection associated with respiratory failure in an immunocompetent adult

artículo científico publicado en 2006

Miscarriage and stillbirth following maternal Zika virus infection in nonhuman primates

scholarly article by Dawn M Dudley et al published August 2018 in Nature Medicine

Morbidity and mortality of short-bowel syndrome in infants with abdominal wall defects.

artículo científico publicado en 2002

NEW GENOMES FROM THE CONGO BASIN EXPAND HISTORY OF CRF01_AE ORIGIN AND DISSEMINATION

scientific article published on 12 April 2020

Nanopore DNA Sequencing and Genome Assembly on the International Space Station.

artículo científico publicado en 2017

Neurobrucellosis: Unexpected Answer From Metagenomic Next-Generation Sequencing.

artículo científico publicado en 2017

Neutralizing immunity in vaccine breakthrough infections from the SARS-CoV-2 Omicron and Delta variants

No viral association found in a set of differentiated vulvar intraepithelial neoplasia cases by human papillomavirus and pan-viral microarray testing

artículo científico publicado en 2015

Pan-viral serology implicates enteroviruses in acute flaccid myelitis

artículo científico publicado en 2019

Pandemic (H1N1) 2009 infection in patients with hematologic malignancy

artículo científico publicado en 2010

Point-Counterpoint: Should We Be Performing Metagenomic Next-Generation Sequencing for Infectious Disease Diagnosis in the Clinical Laboratory?

scientific article published on 24 February 2020

Polyoma virus-associated carcinomas of the urologic tract: a clinicopathologic and molecular study

artículo científico publicado en 2018

Publisher Correction: Experimental Zika Virus Infection in the Pregnant Common Marmoset Induces Spontaneous Fetal Loss and Neurodevelopmental Abnormalities

artículo científico publicado en 2018

RNA-Seq Analysis of Gene Expression, Viral Pathogen, and B-Cell/T-Cell Receptor Signatures in Complex Chronic Disease

artículo científico publicado en 2017

Rapid Detection of 2019 Novel Coronavirus SARS-CoV-2 Using a CRISPR-based DETECTR Lateral Flow Assay

artículo científico publicado en 2020

Rapid metagenomic identification of viral pathogens in clinical samples by real-time nanopore sequencing analysis

artículo científico publicado en 2015

Rapid metagenomic identification of viral pathogens in clinical samples by real-time nanopore sequencing analysis.

artículo científico publicado en 2015

Rapid pathogen detection by metagenomic next-generation sequencing of infected body fluids

scientific article published on 09 November 2020

ReScan, a Multiplex Diagnostic Pipeline, Pans Human Sera for SARS-CoV-2 Antigens

artículo científico publicado en 2020

Recovery of divergent avian bornaviruses from cases of proventricular dilatation disease: identification of a candidate etiologic agent

artículo científico publicado en 2008

Review: resolution issues in single-particle reconstruction

artículo científico publicado en 1999

Rosavirus: the prototype of a proposed new genus of the Picornaviridae family

artículo científico publicado en 2013

SARS-CoV-2 seroprevalence and neutralizing activity in donor and patient blood

scientific article published on 17 September 2020

SARS-CoV-2 seroprevalence and neutralizing activity in donor and patient blood from the San Francisco Bay Area

artículo científico publicado en 2020

Severe Epididymo-Orchitis and Encephalitis Complicating Anti-PD-1 Therapy

artículo científico publicado en 2019

Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions

artículo científico publicado en 2021

Single-molecule sequencing detection of N6-methyladenine in microbial reference materials

artículo científico publicado en 2019

Streptococcus suis meningitis, United States

artículo científico publicado en 2008

Structural analysis of a fiber-pseudotyped adenovirus with ocular tropism suggests differential modes of cell receptor interactions

artículo científico publicado en 2001

Taxonomy of the order Mononegavirales: update 2018.

artículo científico publicado en 2018

Test performance evaluation of SARS-CoV-2 serological assays

scientific article published on 29 April 2020

The B.1.427/1.429 (epsilon) SARS-CoV-2 variants are more virulent than ancestral B.1 (614G) in Syrian hamsters

artículo científico publicado en 2022

The complete genome of klassevirus - a novel picornavirus in pediatric stool

artículo científico publicado en 2009

The eukaryotic gut virome in hematopoietic stem cell transplantation: new clues in enteric graft-versus-host disease.

artículo científico publicado en 2017

The genome sequence of Lone Star virus, a highly divergent bunyavirus found in the Amblyomma americanum tick

artículo científico publicado en 2013

The hidden threat of unidentified agents of disease in human and veterinary biologicals ⬇️

artículo científico publicado el 23 de abril de 2013

The long march: a sample preparation technique that enhances contig length and coverage by high-throughput short-read sequencing

artículo científico publicado en 2008

The mitochondrial genome and a 60-kb nuclear DNA segment from Naegleria fowleri, the causative agent of primary amoebic meningoencephalitis.

artículo científico publicado en 2013

The perils of pathogen discovery: origin of a novel parvovirus-like hybrid genome traced to nucleic acid extraction spin columns

artículo científico publicado en 2013

Thoracic CT findings of novel influenza A (H1N1) infection in immunocompromised patients

artículo científico publicado en 2010

Toward an understanding of changes in diversity associated with fecal microbiome transplantation based on 16S rRNA gene deep sequencing

artículo científico publicado en 2012

Two Rapidly Growing Mycobacterial Species Isolated from a Brain Abscess: First Whole-Genome Sequences of Mycobacterium immunogenum and Mycobacterium llatzerense

artículo científico publicado en 2015

Two human immunodeficiency virus Type 2 cases in US blood donors including serologic, molecular, and genomic characterization of an epidemiologically unusual case

artículo científico publicado en 2016

Two sides of a coin: a Zika virus mutation selected in pregnant rhesus macaques promotes fetal infection in mice but at a cost of reduced fitness in nonpregnant macaques and diminished transmissibility by vectors

artículo científico publicado en 2020

Unlocking capacities of genomics for the COVID-19 response and future pandemics

artículo científico publicado en 2022

Upregulation of HERV-K is Linked to Immunity and Inflammation in Pulmonary Arterial Hypertension

artículo científico publicado en 2017

Using a pan-viral microarray assay (Virochip) to screen clinical samples for viral pathogens

artículo científico publicado en 2011

Utility of DNA microarrays for detection of viruses in acute respiratory tract infections in children

artículo científico

Utility of Metagenomic Next-Generation Sequencing for Characterization of HIV and Human Pegivirus Diversity

artículo científico publicado en 2015

Validation of Metagenomic Next-Generation Sequencing Tests for Universal Pathogen Detection

artículo científico publicado en 2017

Viral Surveillance in Serum Samples From Patients With Acute Liver Failure By Metagenomic Next-Generation Sequencing

artículo científico publicado en 2017

Viral infection in acute exacerbation of idiopathic pulmonary fibrosis

artículo científico publicado en 2011

Viral pathogen discovery ⬇️

artículo científico publicado el 29 de mayo de 2013

Whole blood human transcriptome and virome analysis of ME/CFS patients experiencing post-exertional malaise following cardiopulmonary exercise testing

artículo científico publicado en 2019

Whole-Genome Sequencing of Methicillin-Resistant Staphylococcus aureus Resistant to Fifth-Generation Cephalosporins Reveals Potential Non-mecA Mechanisms of Resistance

artículo científico publicado en 2016

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