Lista de obras - Jacquelyn S Fetrow - Dominio Público Uruguay

1H, 13C and 15N resonance assignments and secondary structure of the human protein tyrosine phosphatase, PRL-2.

artículo científico publicado en 2003

A kinetic analysis of the auxin transcriptome reveals cell wall remodeling proteins that modulate lateral root development in Arabidopsis

artículo científico publicado en 2013

A method of directed random mutagenesis of the yeast chromosome shows that the iso-1-cytochrome c heme ligand His18 is essential

scientific article published on 01 October 1995

A proposed structural model of domain 1 of fasciclin III neural cell adhesion protein based on an inverse folding algorithm

artículo científico publicado en 1995

Active site profiling to identify protein functional sites in sequences and structures using the Deacon Active Site Profiler (DASP).

artículo científico publicado en 2006

Algebraic dependency models of protein signal transduction networks from time-series data.

artículo científico publicado en 2005

An Atlas of Peroxiredoxins Created Using an Active Site Profile-Based Approach to Functionally Relevant Clustering of Proteins.

artículo científico publicado en 2017

An approach to functionally relevant clustering of the protein universe: Active site profile-based clustering of protein structures and sequences

artículo científico publicado en 2017

Analysis of the peroxiredoxin family: using active-site structure and sequence information for global classification and residue analysis

artículo científico publicado en 2010

Analysis of the structure and stability of omega loop A replacements in yeast iso-1-cytochrome c.

artículo científico publicado en 1997

Assignment of15N Chemical Shifts and15N Relaxation Measurements for Oxidized and Reduced Iso-1-cytochromec†

artículo científico publicado en 1999

Automatic derivation of substructures yields novel structural building blocks in globular proteins.

artículo científico publicado en 1993

Boundary distinction interpretation of microarray data via discrete correlate summation.

artículo científico publicado en 2011

Broad phenotypic changes associated with gain of radiation resistance in head and neck squamous cell cancer

artículo científico publicado en 2014

Chemical and Structural Diversity in Cyclooxygenase Protein Active Sites

artículo científico publicado en 2005

Comparison of Co-Temporal Modeling Algorithms on Sparse Experimental Time Series Data Sets

article

Comparison of topological clustering within protein networks using edge metrics that evaluate full sequence, full structure, and active site microenvironment similarity

artículo científico publicado en 2015

Conformational and oligomeric effects on the cysteine pK(a) of tryparedoxin peroxidase

artículo científico publicado en 2010

Continuous cotemporal probabilistic modeling of systems biology networks from sparse data

artículo científico publicado en 2011

Corrigendum: Mutating a Highly Conserved Residue in Diverse Cytochrome P450s Facilitates Diastereoselective Olefin Cyclopropanation

artículo científico publicado en 2016

DASP3: identification of protein sequences belonging to functionally relevant groups

artículo científico publicado en 2016

Deletions and replacements of omega loops in yeast iso-1-cytochrome c

artículo científico publicado en 1989

Disease progression and phasic changes in gene expression in a mouse model of osteoarthritis

artículo científico publicado en 2013

Dynamics of dendritic cell maturation are identified through a novel filtering strategy applied to biological time-course microarray replicates

artículo científico publicado en 2010

EPR-detected folding kinetics of externally located cysteine-directed spin-labeled mutants of iso-1-cytochrome c.

artículo científico publicado en 2001

Electrostatics of cysteine residues in proteins: parameterization and validation of a simple model.

artículo científico publicado en 2012

Enhanced functional annotation of protein sequences via the use of structural descriptors

artículo científico publicado en 2001

Fluorescent and affinity-based tools to detect cysteine sulfenic acid formation in proteins

artículo científico publicado en 2007

From fold predictions to function predictions: automation of functional site conservation analysis for functional genome predictions

artículo científico publicado en 1999

Function driven protein evolution. A possible proto-protein for the RNA-binding proteins ⬇️

artículo científico publicado el 1 de enero de 1998

Function first: a powerful approach to post-genomic drug discovery

artículo científico publicado en 2002

Functional analysis of the Escherichia coli genome for members of the alpha/beta hydrolase family

artículo científico publicado en 1998

Functional analysis of the Escherichia coli genome using the sequence-to-structure-to-function paradigm: identification of proteins exhibiting the glutaredoxin/thioredoxin disulfide oxidoreductase activity

artículo científico publicado en 1998

Functional site profiling and electrostatic analysis of cysteines modifiable to cysteine sulfenic acid.

artículo científico publicado en 2008

Genomic-scale comparison of sequence- and structure-based methods of function prediction: does structure provide additional insight?

artículo científico publicado en 2001

Hydrogen exchange behavior of [U-15N]-labeled oxidized and reduced iso-1-cytochrome c.

artículo científico publicado en 1999

Identification of transcriptional and receptor networks that control root responses to ethylene.

artículo científico publicado en 2017

Impact of the Type I Interferon Receptor on the Global Gene Expression Program During the Course of Dendritic Cell Maturation Induced by Polyinosinic Polycytidylic Acid

artículo científico publicado en 2016

Insights into correlated motions and long-range interactions in CheY derived from molecular dynamics simulations

artículo científico publicado en 2006

Integration of gene expression data with network-based analysis to identify signaling and metabolic pathways regulated during the development of osteoarthritis

artículo científico publicado en 2014

Isofunctional Clustering and Conformational Analysis of the Arsenate Reductase Superfamily Reveals Nine Distinct Clusters

artículo científico publicado en 2020

Loop Replacement and Random Mutagenesis of -Loop D, Residues 7084, in Iso-1-cytochromec

artículo científico publicado en 1996

Metabolic pathways are affected differently in Saccharomyces cerevisiae thiol peroxidase mutants during redox stress with hydrogen peroxide

artículo científico publicado en 2011

Method for prediction of protein function from sequence using the sequence-to-structure-to-function paradigm with application to glutaredoxins/thioredoxins and T1 ribonucleases

artículo científico publicado en 1998

Microarray analysis reveals age-related differences in gene expression during the development of osteoarthritis in mice

artículo científico publicado en 2012

Microarray analysis reveals age-related differences in gene expression during the development of osteoarthritis in mice.

artículo científico publicado en 2010

Mutagenesis of histidine 26 demonstrates the importance of loop‐loop and loop‐protein interactions for the function of iso‐1‐cytochrome c ⬇️

artículo científico publicado el 1 de abril de 1998

Mutating a Highly Conserved Residue in Diverse Cytochrome P450s Facilitates Diastereoselective Olefin Cyclopropanation

artículo científico publicado en 2015

Mutations in alpha-helical solvent-exposed sites of eglin c have long-range effects: evidence from molecular dynamics simulations

artículo científico publicado en 2006

New computational approaches to understanding molecular protein function

artículo científico publicado en 2018

New programs for protein tertiary structure prediction

artículo científico publicado en 1993

Omega loops: nonregular secondary structures significant in protein function and stability

artículo científico publicado en 1995

PREX: PeroxiRedoxin classification indEX, a database of subfamily assignments across the diverse peroxiredoxin family

artículo científico publicado en 2011

Prediction and evaluation of side-chain conformations for protein backbone structures

artículo científico publicado en 1996

Prediction of deleterious functional effects of amino acid mutations using a library of structure-based function descriptors

artículo científico publicado en 2003

Rose is a rose is a rose. Especially if you're a George

artículo científico publicado en 2006

SC²ATmd: a tool for integration of the figure of merit with cluster analysis for gene expression data

artículo científico publicado en 2011

Scientific software development is not an oxymoron

artículo científico publicado en 2006

Sequence- and structure-based protein function prediction from genomic information.

artículo científico publicado en 2001

Structural and electrostatic asymmetry at the active site in typical and atypical peroxiredoxin dimers.

artículo científico publicado en 2012

Structural genomics and its importance for gene function analysis.

artículo científico publicado en 2000

Structure, Function, and Temperature Sensitivity of Directed, Random Mutants at Proline 76 and Glycine 77 in Ω-Loop D of Yeast Iso-1-cytochromec†

artículo científico publicado en 1998

Structure-based Active Site Profiles for Genome Analysis and Functional Family Subclassification

article

Structure-based functional motif identifies a potential disulfide oxidoreductase active site in the serine/threonine protein phosphatase-1 subfamily

artículo científico publicado en 1999

Synergistic computational and experimental proteomics approaches for more accurate detection of active serine hydrolases in yeast

artículo científico publicado en 2003

The protein folding problem: a biophysical enigma.

artículo científico publicado en 2002

The requirement of reversible cysteine sulfenic acid formation for T cell activation and function.

artículo científico publicado en 2007

Using information theory to discover side chain rotamer classes: analysis of the effects of local backbone structure.

artículo científico publicado en 1999

Using molecular dynamics to map interaction networks in an aminoacyl-tRNA synthetase

artículo científico publicado en 2007

Lista de obras de Jacquelyn S Fetrow

1H, 13C and 15N resonance assignments and secondary structure of the human protein tyrosine phosphatase, PRL-2.

A kinetic analysis of the auxin transcriptome reveals cell wall remodeling proteins that modulate lateral root development in Arabidopsis

A method of directed random mutagenesis of the yeast chromosome shows that the iso-1-cytochrome c heme ligand His18 is essential

A proposed structural model of domain 1 of fasciclin III neural cell adhesion protein based on an inverse folding algorithm

Active site profiling to identify protein functional sites in sequences and structures using the Deacon Active Site Profiler (DASP).

Algebraic dependency models of protein signal transduction networks from time-series data.

An Atlas of Peroxiredoxins Created Using an Active Site Profile-Based Approach to Functionally Relevant Clustering of Proteins.

An approach to functionally relevant clustering of the protein universe: Active site profile-based clustering of protein structures and sequences

Analysis of the peroxiredoxin family: using active-site structure and sequence information for global classification and residue analysis

Analysis of the structure and stability of omega loop A replacements in yeast iso-1-cytochrome c.

Assignment of15N Chemical Shifts and15N Relaxation Measurements for Oxidized and Reduced Iso-1-cytochromec†

Automatic derivation of substructures yields novel structural building blocks in globular proteins.

Boundary distinction interpretation of microarray data via discrete correlate summation.

Broad phenotypic changes associated with gain of radiation resistance in head and neck squamous cell cancer

Chemical and Structural Diversity in Cyclooxygenase Protein Active Sites

Comparison of Co-Temporal Modeling Algorithms on Sparse Experimental Time Series Data Sets

Comparison of topological clustering within protein networks using edge metrics that evaluate full sequence, full structure, and active site microenvironment similarity

Conformational and oligomeric effects on the cysteine pK(a) of tryparedoxin peroxidase

Continuous cotemporal probabilistic modeling of systems biology networks from sparse data

Corrigendum: Mutating a Highly Conserved Residue in Diverse Cytochrome P450s Facilitates Diastereoselective Olefin Cyclopropanation

DASP3: identification of protein sequences belonging to functionally relevant groups

Deletions and replacements of omega loops in yeast iso-1-cytochrome c

Disease progression and phasic changes in gene expression in a mouse model of osteoarthritis

Dynamics of dendritic cell maturation are identified through a novel filtering strategy applied to biological time-course microarray replicates

EPR-detected folding kinetics of externally located cysteine-directed spin-labeled mutants of iso-1-cytochrome c.

Electrostatics of cysteine residues in proteins: parameterization and validation of a simple model.

Enhanced functional annotation of protein sequences via the use of structural descriptors

Fluorescent and affinity-based tools to detect cysteine sulfenic acid formation in proteins

From fold predictions to function predictions: automation of functional site conservation analysis for functional genome predictions

Function driven protein evolution. A possible proto-protein for the RNA-binding proteins ⬇️

Function first: a powerful approach to post-genomic drug discovery

Functional analysis of the Escherichia coli genome for members of the alpha/beta hydrolase family

Functional analysis of the Escherichia coli genome using the sequence-to-structure-to-function paradigm: identification of proteins exhibiting the glutaredoxin/thioredoxin disulfide oxidoreductase activity

Functional site profiling and electrostatic analysis of cysteines modifiable to cysteine sulfenic acid.

Genomic-scale comparison of sequence- and structure-based methods of function prediction: does structure provide additional insight?

Hydrogen exchange behavior of [U-15N]-labeled oxidized and reduced iso-1-cytochrome c.

Identification of transcriptional and receptor networks that control root responses to ethylene.

Impact of the Type I Interferon Receptor on the Global Gene Expression Program During the Course of Dendritic Cell Maturation Induced by Polyinosinic Polycytidylic Acid

Insights into correlated motions and long-range interactions in CheY derived from molecular dynamics simulations

Integration of gene expression data with network-based analysis to identify signaling and metabolic pathways regulated during the development of osteoarthritis

Isofunctional Clustering and Conformational Analysis of the Arsenate Reductase Superfamily Reveals Nine Distinct Clusters

Loop Replacement and Random Mutagenesis of -Loop D, Residues 7084, in Iso-1-cytochromec

Metabolic pathways are affected differently in Saccharomyces cerevisiae thiol peroxidase mutants during redox stress with hydrogen peroxide

Method for prediction of protein function from sequence using the sequence-to-structure-to-function paradigm with application to glutaredoxins/thioredoxins and T1 ribonucleases

Microarray analysis reveals age-related differences in gene expression during the development of osteoarthritis in mice

Microarray analysis reveals age-related differences in gene expression during the development of osteoarthritis in mice.

Mutagenesis of histidine 26 demonstrates the importance of loop‐loop and loop‐protein interactions for the function of iso‐1‐cytochrome c ⬇️

Mutating a Highly Conserved Residue in Diverse Cytochrome P450s Facilitates Diastereoselective Olefin Cyclopropanation

Mutations in alpha-helical solvent-exposed sites of eglin c have long-range effects: evidence from molecular dynamics simulations

New computational approaches to understanding molecular protein function

New programs for protein tertiary structure prediction

Omega loops: nonregular secondary structures significant in protein function and stability

PREX: PeroxiRedoxin classification indEX, a database of subfamily assignments across the diverse peroxiredoxin family

Prediction and evaluation of side-chain conformations for protein backbone structures

Prediction of deleterious functional effects of amino acid mutations using a library of structure-based function descriptors

Rose is a rose is a rose. Especially if you're a George

SC²ATmd: a tool for integration of the figure of merit with cluster analysis for gene expression data

Scientific software development is not an oxymoron

Sequence- and structure-based protein function prediction from genomic information.

Structural and electrostatic asymmetry at the active site in typical and atypical peroxiredoxin dimers.

Structural genomics and its importance for gene function analysis.

Structure, Function, and Temperature Sensitivity of Directed, Random Mutants at Proline 76 and Glycine 77 in Ω-Loop D of Yeast Iso-1-cytochromec†

Structure-based Active Site Profiles for Genome Analysis and Functional Family Subclassification

Structure-based functional motif identifies a potential disulfide oxidoreductase active site in the serine/threonine protein phosphatase-1 subfamily

Synergistic computational and experimental proteomics approaches for more accurate detection of active serine hydrolases in yeast

The protein folding problem: a biophysical enigma.

The requirement of reversible cysteine sulfenic acid formation for T cell activation and function.

Using information theory to discover side chain rotamer classes: analysis of the effects of local backbone structure.

Using molecular dynamics to map interaction networks in an aminoacyl-tRNA synthetase