Lista de obras - Naoki Osada - Dominio Público Uruguay

A Generalized Linear Model for Decomposing Cis-regulatory, Parent-of-Origin, and Maternal Effects on Allele-Specific Gene Expression

artículo científico publicado en 2017

A family tree of vertebrate chemokine receptors for a unified nomenclature

artículo científico publicado en 2011

A key metabolic gene for recurrent freshwater colonization and radiation in fishes

scientific article published on 01 May 2019

A tandem gene duplication followed by recruitment of a retrotransposon created the paralogous bucentaur gene (bcntp97) in the ancestral ruminant.

artículo científico publicado en 2005

A transposable element-mediated gene divergence that directly produces a novel type bovine Bcnt protein including the endonuclease domain of RTE-1.

artículo científico publicado en 2003

Aberrant termination of reproduction-related TMEM30C transcripts in the hominoids.

artículo científico publicado en 2006

Adaptive divergence with gene flow in incipient speciation of Miscanthus floridulus/sinensis complex (Poaceae).

artículo científico publicado en 2014

An Individual-Based Diploid Model Predicts Limited Conditions Under Which Stochastic Gene Expression Becomes Advantageous

artículo científico publicado en 2015

Analysis of 5'-end sequences of chimpanzee cDNAs

artículo científico publicado en 2003

Ancient genome-wide admixture extends beyond the current hybrid zone between Macaca fascicularis and M. mulatta

artículo científico publicado en 2010

Assignment of 118 novel cDNAs of cynomolgus monkey brain to human chromosomes

artículo científico publicado en 2001

CYP2D44 polymorphisms in cynomolgus and rhesus macaques.

artículo científico publicado en 2015

Characterization of MHC class I transcripts of a Malaysian cynomolgus macaque by high-throughput pyrosequencing and EST libraries

artículo científico publicado en 2011

Cis- and Trans-regulatory Effects on Gene Expression in a Natural Population of Drosophila melanogaster

artículo científico publicado en 2017

Collection of Macaca fascicularis cDNAs derived from bone marrow, kidney, liver, pancreas, spleen, and thymus

artículo científico publicado en 2009

Complex patterns of cis-regulatory polymorphisms in ebony underlie standing pigmentation variation in Drosophila melanogaster

artículo científico publicado en 2015

Comprehensive phylogenomic analysis reveals a novel cluster of simian endogenous retroviral sequences in Colobinae monkeys

artículo científico publicado en 2018

CpG site degeneration triggered by the loss of functional constraint created a highly polymorphic macaque drug-metabolizing gene, CYP1A2.

artículo científico publicado en 2011

Cynomolgus monkey testicular cDNAs for discovery of novel human genes in the human genome sequence

artículo científico publicado en 2002

Demographic History of the Brown Bear (Ursus arctos) on Hokkaido Island, Japan, Based on Whole-Genomic Sequence Analysis

Development of an integrative database with 499 novel microsatellite markers for Macaca fascicularis

artículo científico publicado en 2009

Development of genotyping method for functionally relevant variants of cytochromes P450 in cynomolgus macaques

artículo científico publicado en 2017

Dopamine receptor genes and evolutionary differentiation in the domestication of fighting cocks and long-crowing chickens

artículo científico publicado en 2014

Duplication and gene conversion in the Drosophila melanogaster genome

artículo científico publicado en 2008

Dysfunctional missense variant of OAT10/SLC22A13 decreases gout risk and serum uric acid levels

scientific article published on 28 November 2019

Ecological genomics in Xanthomonas: the nature of genetic adaptation with homologous recombination and host shifts

artículo científico publicado en 2015

Evolution of sexual isolation during secondary contact: genotypic versus phenotypic changes in laboratory populations.

artículo científico publicado en 2005

Evolutionary rates of commonly used nuclear and organelle markers of Arabidopsis relatives (Brassicaceae).

artículo científico publicado en 2012

Expressed sequence tags from cynomolgus monkey (Macaca fascicularis) liver: a systematic identification of drug-metabolizing enzymes

artículo científico publicado en 2007

Extensive expansion and diversification of the chemokine gene family in zebrafish: identification of a novel chemokine subfamily CX.

artículo científico publicado en 2008

Finding the factors of reduced genetic diversity on X chromosomes of Macaca fascicularis: male-driven evolution, demography, and natural selection

artículo científico publicado en 2013

Footprints of natural and artificial selection for photoperiod pathway genes in Oryza

artículo científico publicado en 2012

Genetic diversity and population structure of Glossina morsitans morsitans in the active foci of human African trypanosomiasis in Zambia and Malawi

scientific article published on 25 July 2019

Genetic diversity in humans and non-human primates and its evolutionary consequences

artículo científico publicado en 2015

Genetic variants of CYP3A4 and CYP3A5 in cynomolgus and rhesus macaques.

artículo científico publicado en 2009

Genome-scale approaches for studying human and non-human primate evolution

artículo científico publicado en 2015

Genomic inferences of the cis-regulatory nucleotide polymorphisms underlying gene expression differences between Drosophila melanogaster mating races

artículo científico publicado en 2006

House mouse Mus musculus dispersal in East Eurasia inferred from 98 newly determined complete mitochondrial genome sequences

scientific article published on 15 September 2020

IL-10 is a negative regulatory factor of CAWS-vasculitis in CBA/J mice as assessed by comparison with Bruton's tyrosine kinase-deficient CBA/N mice

artículo científico publicado en 2009

Identification of a novel CXCL1-like chemokine gene in macaques and its inactivation in hominids

artículo científico publicado en 2007

Inference of expression-dependent negative selection based on polymorphism and divergence in the human genome

artículo científico publicado en 2007

Inferring the mode of speciation from genomic data: a study of the great apes

artículo científico publicado en 2005

Insights into <i>Mus musculus</i> Population Structure across Eurasia Revealed by Whole-Genome Analysis

Large-scale analysis of Macaca fascicularis transcripts and inference of genetic divergence between M. fascicularis and M. mulatta

artículo científico publicado en 2008

Mitochondrial-nuclear interactions and accelerated compensatory evolution: evidence from the primate cytochrome C oxidase complex

artículo científico publicado en 2011

Molecular cloning, genomic characterization and over-expression of a novel gene, XRRA1, identified from human colorectal cancer cell HCT116Clone2_XRR and macaque testis

artículo científico publicado en 2003

Multilocus analysis of genetic divergence between outcrossing Arabidopsis species: evidence of genome-wide admixture

artículo científico

Multiple duplication of the bucentaur gene family, which recruits the APE-like domain of retrotransposon: Identification of a novel homolog and distinct cellular expression.

artículo científico publicado en 2009

Novel DNA sequence isolated from blood donors with high transaminase levels

artículo científico publicado en 2011

Novel endogenous simian retroviral integrations in Vero cells: implications for quality control of a human vaccine cell substrate

artículo científico publicado en 2018

Phylogenetic Inconsistency Caused by Ancient Sex-Biased Gene Migration ⬇️

artículo científico publicado el 29 de septiembre de 2011

Population Genetics in Nonmodel Organisms: II. Natural Selection in Marginal Habitats Revealed by Deep Sequencing on Dual Platforms

article

Population genetics of non-genetic traits: evolutionary roles of stochasticity in gene expression.

artículo científico publicado en 2015

Positive and negative regulation of adenovirus infection by CAR-like soluble protein, CLSP.

artículo científico publicado en 2007

Prdm9 polymorphism unveils mouse evolutionary tracks

artículo científico publicado en 2014

Quantifying dominance and deleterious effect on human disease genes

scholarly article

Rate of evolution in brain-expressed genes in humans and other primates

artículo científico publicado en 2007

Search for genes positively selected during primate evolution by 5'-end-sequence screening of cynomolgus monkey cDNAs

artículo científico publicado en 2002

Substitution rate and structural divergence of 5'UTR evolution: comparative analysis between human and cynomolgus monkey cDNAs

artículo científico publicado en 2005

Systematic classification of vertebrate chemokines based on conserved synteny and evolutionary history

artículo científico publicado en 2013

The evolution of mammalian chemokine genes.

artículo científico publicado en 2010

The genome landscape of the african green monkey kidney-derived vero cell line

artículo científico publicado en 2014

Translational Repression of a Splice Variant of Cynomolgus Macaque CXCL1L by Its C-Terminal Sequence.

artículo científico publicado en 2017

Weak selection and protein evolution

artículo científico publicado en 2012

Whole-genome sequencing and analysis of the Malaysian cynomolgus macaque (Macaca fascicularis) genome

artículo científico publicado en 2012

Whole-genome sequencing of six Mauritian Cynomolgus macaques (Macaca fascicularis) reveals a genome-wide pattern of polymorphisms under extreme population bottleneck

scientific article published on 23 March 2015

Whole-genome sequencing of tibetan macaque (Macaca Thibetana) provides new insight into the macaque evolutionary history

artículo científico publicado en 2014

Lista de obras de Naoki Osada

A Generalized Linear Model for Decomposing Cis-regulatory, Parent-of-Origin, and Maternal Effects on Allele-Specific Gene Expression

A family tree of vertebrate chemokine receptors for a unified nomenclature

A key metabolic gene for recurrent freshwater colonization and radiation in fishes

A tandem gene duplication followed by recruitment of a retrotransposon created the paralogous bucentaur gene (bcntp97) in the ancestral ruminant.

A transposable element-mediated gene divergence that directly produces a novel type bovine Bcnt protein including the endonuclease domain of RTE-1.

Aberrant termination of reproduction-related TMEM30C transcripts in the hominoids.

Adaptive divergence with gene flow in incipient speciation of Miscanthus floridulus/sinensis complex (Poaceae).

An Individual-Based Diploid Model Predicts Limited Conditions Under Which Stochastic Gene Expression Becomes Advantageous

Analysis of 5'-end sequences of chimpanzee cDNAs

Ancient genome-wide admixture extends beyond the current hybrid zone between Macaca fascicularis and M. mulatta

Assignment of 118 novel cDNAs of cynomolgus monkey brain to human chromosomes

CYP2D44 polymorphisms in cynomolgus and rhesus macaques.

Characterization of MHC class I transcripts of a Malaysian cynomolgus macaque by high-throughput pyrosequencing and EST libraries

Cis- and Trans-regulatory Effects on Gene Expression in a Natural Population of Drosophila melanogaster

Collection of Macaca fascicularis cDNAs derived from bone marrow, kidney, liver, pancreas, spleen, and thymus

Complex patterns of cis-regulatory polymorphisms in ebony underlie standing pigmentation variation in Drosophila melanogaster

Comprehensive phylogenomic analysis reveals a novel cluster of simian endogenous retroviral sequences in Colobinae monkeys

CpG site degeneration triggered by the loss of functional constraint created a highly polymorphic macaque drug-metabolizing gene, CYP1A2.

Cynomolgus monkey testicular cDNAs for discovery of novel human genes in the human genome sequence

Demographic History of the Brown Bear (Ursus arctos) on Hokkaido Island, Japan, Based on Whole-Genomic Sequence Analysis

Development of an integrative database with 499 novel microsatellite markers for Macaca fascicularis

Development of genotyping method for functionally relevant variants of cytochromes P450 in cynomolgus macaques

Dopamine receptor genes and evolutionary differentiation in the domestication of fighting cocks and long-crowing chickens

Duplication and gene conversion in the Drosophila melanogaster genome

Dysfunctional missense variant of OAT10/SLC22A13 decreases gout risk and serum uric acid levels

Ecological genomics in Xanthomonas: the nature of genetic adaptation with homologous recombination and host shifts

Evolution of sexual isolation during secondary contact: genotypic versus phenotypic changes in laboratory populations.

Evolutionary rates of commonly used nuclear and organelle markers of Arabidopsis relatives (Brassicaceae).

Expressed sequence tags from cynomolgus monkey (Macaca fascicularis) liver: a systematic identification of drug-metabolizing enzymes

Extensive expansion and diversification of the chemokine gene family in zebrafish: identification of a novel chemokine subfamily CX.

Finding the factors of reduced genetic diversity on X chromosomes of Macaca fascicularis: male-driven evolution, demography, and natural selection

Footprints of natural and artificial selection for photoperiod pathway genes in Oryza

Genetic diversity and population structure of Glossina morsitans morsitans in the active foci of human African trypanosomiasis in Zambia and Malawi

Genetic diversity in humans and non-human primates and its evolutionary consequences

Genetic variants of CYP3A4 and CYP3A5 in cynomolgus and rhesus macaques.

Genome-scale approaches for studying human and non-human primate evolution

Genomic inferences of the cis-regulatory nucleotide polymorphisms underlying gene expression differences between Drosophila melanogaster mating races

House mouse Mus musculus dispersal in East Eurasia inferred from 98 newly determined complete mitochondrial genome sequences

IL-10 is a negative regulatory factor of CAWS-vasculitis in CBA/J mice as assessed by comparison with Bruton's tyrosine kinase-deficient CBA/N mice

Identification of a novel CXCL1-like chemokine gene in macaques and its inactivation in hominids

Inference of expression-dependent negative selection based on polymorphism and divergence in the human genome

Inferring the mode of speciation from genomic data: a study of the great apes

Insights into <i>Mus musculus</i> Population Structure across Eurasia Revealed by Whole-Genome Analysis

Large-scale analysis of Macaca fascicularis transcripts and inference of genetic divergence between M. fascicularis and M. mulatta

Mitochondrial-nuclear interactions and accelerated compensatory evolution: evidence from the primate cytochrome C oxidase complex

Molecular cloning, genomic characterization and over-expression of a novel gene, XRRA1, identified from human colorectal cancer cell HCT116Clone2_XRR and macaque testis

Multilocus analysis of genetic divergence between outcrossing Arabidopsis species: evidence of genome-wide admixture

Multiple duplication of the bucentaur gene family, which recruits the APE-like domain of retrotransposon: Identification of a novel homolog and distinct cellular expression.

Novel DNA sequence isolated from blood donors with high transaminase levels

Novel endogenous simian retroviral integrations in Vero cells: implications for quality control of a human vaccine cell substrate

Phylogenetic Inconsistency Caused by Ancient Sex-Biased Gene Migration ⬇️

Population Genetics in Nonmodel Organisms: II. Natural Selection in Marginal Habitats Revealed by Deep Sequencing on Dual Platforms

Population genetics of non-genetic traits: evolutionary roles of stochasticity in gene expression.

Positive and negative regulation of adenovirus infection by CAR-like soluble protein, CLSP.

Prdm9 polymorphism unveils mouse evolutionary tracks

Quantifying dominance and deleterious effect on human disease genes

Rate of evolution in brain-expressed genes in humans and other primates

Search for genes positively selected during primate evolution by 5'-end-sequence screening of cynomolgus monkey cDNAs

Substitution rate and structural divergence of 5'UTR evolution: comparative analysis between human and cynomolgus monkey cDNAs

Systematic classification of vertebrate chemokines based on conserved synteny and evolutionary history

The evolution of mammalian chemokine genes.

The genome landscape of the african green monkey kidney-derived vero cell line

Translational Repression of a Splice Variant of Cynomolgus Macaque CXCL1L by Its C-Terminal Sequence.

Weak selection and protein evolution

Whole-genome sequencing and analysis of the Malaysian cynomolgus macaque (Macaca fascicularis) genome

Whole-genome sequencing of six Mauritian Cynomolgus macaques (Macaca fascicularis) reveals a genome-wide pattern of polymorphisms under extreme population bottleneck

Whole-genome sequencing of tibetan macaque (Macaca Thibetana) provides new insight into the macaque evolutionary history