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Lista de obras de John K. Colbourne

100 years of anthropogenic impact causes changes in freshwater functional biodiversity

A comprehensive epigenomic analysis of phenotypically distinguishable, genetically identical female and male Daphnia pulex

scientific article published on 06 January 2020

A machine-learning approach to combined evidence validation of genome assemblies

artículo científico publicado en 2008

A microsatellite-based genetic linkage map of the waterflea, Daphnia pulex: On the prospect of crustacean genomics

artículo científico publicado en 2006

A millennial-scale chronicle of evolutionary responses to cultural eutrophication in Daphnia.

artículo científico publicado en 2014

A mutation in the receptor Methoprene-tolerant alters juvenile hormone response in insects and crustaceans

artículo científico publicado en 2013

Acidity promotes degradation of multi-species environmental DNA in lotic mesocosms

article

An SNP-based second-generation genetic map of Daphnia magna and its application to QTL analysis of phenotypic traits

artículo científico publicado en 2014

AphidBase: a centralized bioinformatic resource for annotation of the pea aphid genome.

artículo científico publicado en 2010

Arsenic Reduces Gene Expression Response to Changing Salinity in Killifish

article

Centennial clonal stability of asexual <i>Daphnia</i> in Greenland lakes despite climate variability

artículo científico publicado en 2020

Centennial clonal stability of asexual Daphnia in Greenland lakes despite climate variability

artículo científico publicado en 2020

Characteristics of the genome of Arsenophonus nasoniae, son-killer bacterium of the wasp Nasonia

artículo científico publicado en 2010

Conservation, loss, and redeployment of Wnt ligands in protostomes: implications for understanding the evolution of segment formation.

artículo científico publicado en 2010

Conserved Transcription Factors Steer Growth-Related Genomic Programs in Daphnia

artículo científico

Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors

artículo científico publicado en 2016

Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors

artículo científico publicado en 2017

De novo transcriptome sequencing in a songbird, the dark-eyed junco (Junco hyemalis): genomic tools for an ecological model system.

artículo científico publicado en 2012

Differential transcriptomic responses of ancient and modern Daphnia genotypes to phosphorus supply.

artículo científico publicado en 2015

Dynamics of Cadmium Acclimation in Daphnia pulex: Linking Fitness Costs, Cross-Tolerance, and Hyper-Induction of Metallothionein

scientific article published on 02 December 2019

ESTPiper--a web-based analysis pipeline for expressed sequence tags

artículo científico publicado en 2009

Early transcriptional response pathways in Daphnia magna are coordinated in networks of crustacean-specific genes.

artículo científico publicado en 2017

Ecological genomics in Daphnia: stress responses and environmental sex determination

artículo científico publicado en 2007

Evolutionary divergence of core and post-translational circadian clock genes in the pitcher-plant mosquito, Wyeomyia smithii

artículo científico publicado en 2015

Evolutionary transition from blood feeding to obligate nonbiting in a mosquito

artículo científico publicado en 2017

Fine-scale mapping of the Nasonia genome to chromosomes using a high-density genotyping microarray

artículo científico publicado en 2013

Function and evolution of DNA methylation in Nasonia vitripennis

artículo científico publicado en 2013

Functional characterization of four metallothionein genes in Daphnia pulex exposed to environmental stressors

scientific article published on 29 December 2011

Functional genomics of acclimation and adaptation in response to thermal stress in Daphnia

artículo científico publicado en 2014

Functional genomics of intraspecific variation in carbon and phosphorus kinetics in Daphnia

artículo científico publicado en 2014

Gene response profiles for Daphnia pulex exposed to the environmental stressor cadmium reveals novel crustacean metallothioneins

artículo científico publicado en 2007

Genome-wide transcription profiles reveal genotype-dependent responses of biological pathways and gene-families in Daphnia exposed to single and mixed stressors.

artículo científico publicado en 2014

Genomes of the rice pest brown planthopper and its endosymbionts reveal complex complementary contributions for host adaptation

artículo científico publicado en 2014

Genomic data integration for ecological and evolutionary traits in non-model organisms

artículo científico publicado en 2014

Genomics in the ecological arena

artículo científico publicado en 2010

Genomics of environmentally induced phenotypes in 2 extremely plastic arthropods.

artículo científico publicado en 2011

Gut pathology and responses to the microsporidium Nosema ceranae in the honey bee Apis mellifera

artículo científico publicado en 2012

Holarctic Phylogeography of an Asexual Species Complex I. Mitochondrial DNA Variation in Arctic Daphnia

article

How do consumers deal with stoichiometric constraints? Lessons from functional genomics using Daphnia pulex.

artículo científico publicado en 2011

How omics technologies can enhance chemical safety regulation: perspectives from academia, government, and industry

artículo científico publicado en 2018

Identification of maternally-loaded RNA transcripts in unfertilized eggs of Tribolium castaneum

artículo científico publicado en 2012

Identification of pathways, gene networks, and paralogous gene families in Daphnia pulex responding to exposure to the toxic cyanobacterium Microcystis aeruginosa.

artículo científico publicado en 2012

Improved Algal Toxicity Test System for Robust Omics-Driven Mode-of-Action Discovery in Chlamydomonas reinhardtii.

artículo científico publicado en 2019

Ionotropic glutamate receptors mediate inducible defense in the water flea Daphnia pulex

artículo científico publicado en 2015

Knowledge-Driven Approaches to Create the MTox700+ Metabolite Panel for Predicting Toxicity

artículo científico publicado en 2022

Male meiosis in Crustacea: synapsis, recombination, epigenetics and fertility in Daphnia magna

artículo científico publicado en 2015

Mitotic activity patterns and cytoskeletal changes throughout the progression of diapause developmental program in Daphnia

artículo científico publicado en 2018

Mixtures of Aluminum and Indium Induce More than Additive Phenotypic and Toxicogenomic Responses in Daphnia magna

artículo científico publicado en 2019

Molecular cloning of doublesex genes of four cladocera (water flea) species.

artículo científico publicado en 2013

Molecular evolution of daphnia immunity genes: polymorphism in a gram-negative binding protein gene and an alpha-2-macroglobulin gene

artículo científico publicado en 2004

Multigenerational Exposures of Daphnia Magna to Pristine and Aged Silver Nanoparticles: Epigenetic Changes and Phenotypical Ageing Related Effects

artículo científico publicado en 2020

Multiple origins of pyrethroid insecticide resistance across the species complex of a nontarget aquatic crustacean, Hyalella azteca

artículo científico publicado en 2013

Natural selection canalizes expression variation of environmentally induced plasticity-enabling genes

artículo científico publicado en 2014

Novel Cadmium Responsive MicroRNAs in Daphnia pulex

artículo científico publicado en 2015

OGS2: genome re-annotation of the jewel wasp Nasonia vitripennis

artículo científico publicado en 2016

Pattern of DNA Methylation in Daphnia: Evolutionary Perspective

artículo científico publicado en 2018

Perfluoroalkyl Substances Stimulate Insulin Secretion by Islet β Cells via G Protein-Coupled Receptor 40

artículo científico publicado en 2020

Phylogenetics and evolution of the Daphnia longispina group (Crustacea) based on 12S rDNA sequence and allozyme variation

artículo científico publicado en 1996

Potential for sexual conflict assessed via testosterone-mediated transcriptional changes in liver and muscle of a songbird

artículo científico publicado en 2013

Predator-induced defences in Daphnia pulex: selection and evaluation of internal reference genes for gene expression studies with real-time PCR

artículo científico publicado en 2010

Profiling sex-biased gene expression during parthenogenetic reproduction in Daphnia pulex

artículo científico publicado en 2007

Rapid, local adaptation of zooplankton behavior to changes in predation pressure in the absence of neutral genetic changes

artículo científico publicado en 2001

Recent advances in crustacean genomics.

artículo científico publicado en 2008

Refining the evolutionary time machine: An assessment of whole genome amplification using single historical Daphnia eggs

artículo científico publicado en 2021

Sampling Daphnia's expressed genes: preservation, expansion and invention of crustacean genes with reference to insect genomes

artículo científico publicado en 2007

Scan, extract, wrap, compute—a 3D method to analyse morphological shape differences.

artículo científico publicado en 2018

Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx

artículo científico publicado en 2009

Sex biased expression and co-expression networks in development, using the hymenopteran Nasonia vitripennis

scientific article published on 27 January 2020

Spatio-temporal processes drive fine-scale genetic structure in an otherwise panmictic seabird population

scientific article published on 26 November 2020

Synergistic interactions of biotic and abiotic environmental stressors on gene expression

artículo científico publicado en 2015

Targeted bisulfite sequencing by solution hybrid selection and massively parallel sequencing

artículo científico publicado en 2011

Testosterone affects neural gene expression differently in male and female juncos: a role for hormones in mediating sexual dimorphism and conflict

artículo científico publicado en 2013

The Quantitative and Molecular Genetic Architecture of a Subdivided Species

article

The Role of Omics in the Application of Adverse Outcome Pathways for Chemical Risk Assessment

artículo científico publicado en 2017

The Toxicogenome of Hyalella azteca: A Model for Sediment Ecotoxicology and Evolutionary Toxicology

artículo científico publicado en 2018

The components of the Daphnia pulex immune system as revealed by complete genome sequencing

artículo científico publicado en 2009

The draft genome sequence of Arsenophonus nasoniae, son-killer bacterium of Nasonia vitripennis, reveals genes associated with virulence and symbiosis

artículo científico publicado en 2010

The ecoresponsive genome of Daphnia pulex

artículo científico publicado en 2011

The evolution of salinity tolerance in Daphnia: a functional genomics approach

artículo científico publicado en 2012

The evolutionary time machine: using dormant propagules to forecast how populations can adapt to changing environments

artículo científico publicado en 2013

The genome of the green anole lizard and a comparative analysis with birds and mammals ⬇️

artículo científico publicado en 2011

The genomic landscape of rapid repeated evolutionary adaptation to toxic pollution in wild fish ⬇️

artículo científico publicado en 2016

The landscape of extreme genomic variation in the highly adaptable Atlantic killifish

artículo científico publicado en 2017

The scale of divergence: a phylogenetic appraisal of intercontinental allopatric speciation in a passively dispersed freshwater zooplankton genus

artículo científico publicado en 2008

The systematics of North American Daphnia (Crustacea: Anomopoda): a molecular phylogenetic approach.

artículo científico

The transcriptomic and proteomic responses of Daphnia pulex to changes in temperature and food supply comprise environment-specific and clone-specific elements

artículo científico publicado en 2018

The unusually long small-subunit ribosomal RNA of the crustacean, Daphnia pulex: sequence and predicted secondary structure.

artículo científico publicado en 1998

Thermal variation and factors influencing vertical migration behavior in Daphnia populations

artículo científico publicado en 2016

Transcription patterns of genes encoding four metallothionein homologs in Daphnia pulex exposed to copper and cadmium are time- and homolog-dependent

artículo científico publicado en 2013

Transcriptome assembly and microarray construction for Enchytraeus crypticus, a model oligochaete to assess stress response mechanisms derived from soil conditions

artículo científico publicado en 2014

Transgenerational response to early spring warming in Daphnia

article

Vision of a near future: Bridging the human health-environment divide. Toward an integrated strategy to understand mechanisms across species for chemical safety assessment

scientific article published on 25 October 2019

Why so many unknown genes? Partitioning orphans from a representative transcriptome of the lone star tick Amblyomma americanum

artículo científico publicado en 2013

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