Lista de obras - Brant C. Faircloth - Dominio Público Uruguay

A Highly Contiguous Reference Genome for Northern Bobwhite (Colinus virginianus)

artículo científico publicado en 2019

A Phylogenomic Perspective on the Radiation of Ray-Finned Fishes Based upon Targeted Sequencing of Ultraconserved Elements (UCEs)

artículo científico publicado en 2013

A Target Enrichment Bait Set for Studying Relationships among Ostariophysan Fishes

artículo científico publicado en 2020

A phylogenomic analysis of turtles ⬇️

artículo científico publicado en 2014

A phylogenomic framework for pelagiarian fishes (Acanthomorpha: Percomorpha) highlights mosaic radiation in the open ocean

artículo científico publicado en 2019

A phylogeny of birds based on over 1,500 loci collected by target enrichment and high-throughput sequencing

artículo científico publicado en 2013

Adapterama I: Universal stubs and primers for thousands of dual-indexed Illumina libraries (iTru & iNext)

Adapterama I: universal stubs and primers for 384 unique dual-indexed or 147,456 combinatorially-indexed Illumina libraries (iTru & iNext)

artículo científico publicado en 2019

Adapterama II: universal amplicon sequencing on illumina platforms (TaggiMatrix)

artículo científico publicado en 2019

Adapterama III: Quadruple-indexed, double/triple-enzyme RADseq libraries (2RAD/3RAD)

artículo científico publicado en 2019

Adapterama IV: Sequence Capture of Dual-digest RADseq Libraries with Identifiable Duplicates (RADcap)

Analysis of a Rapid Evolutionary Radiation Using Ultraconserved Elements: Evidence for a Bias in Some Multispecies Coalescent Methods.

artículo científico publicado en 2016

Author Correction: Dense sampling of bird diversity increases power of comparative genomics

Avoiding Missing Data Biases in Phylogenomic Inference: An Empirical Study in the Landfowl (Aves: Galliformes).

artículo científico publicado en 2015

Capturing Darwin's dream

artículo científico publicado en 2016

Comparison of ultraconserved elements (UCEs) to microsatellite markers for the study of avian hybrid zones: a test in Aphelocoma jays

artículo científico publicado en 2019

Complexity of avian evolution revealed by family-level genomes

artículo científico publicado en 2024

Conflicting Evolutionary Histories of the Mitochondrial and Nuclear Genomes in New World Myotis Bats.

artículo científico publicado en 2018

Dense sampling of bird diversity increases power of comparative genomics

artículo científico publicado en 2020

Developing a community-based genetic nomenclature for anole lizards

artículo científico publicado en 2011

Development and characterization of microsatellite loci for common raven (Corvus corax) and cross species amplification in other Corvidae

artículo científico publicado en 2015

Development and characterization of microsatellite loci for two species of Beringian birds, rock sandpiper (Calidris ptilocnemis) and Pacific wren (Troglodytes pacificus)

Divergence, gene flow, and speciation in eight lineages of trans-Beringian birds

artículo científico publicado en 2020

Dry habitats were crucibles of domestication in the evolution of agriculture in ants.

artículo científico publicado en 2017

Earth history and the passerine superradiation

artículo científico publicado en 2019

Explosive diversification of marine fishes at the Cretaceous–Palaeogene boundary

artículo científico publicado en 2018

Extensive paraphyly in the typical owl family (Strigidae)

artículo científico

Genome assemblies for two Neotropical trees: Jacaranda copaia and Handroanthus guayacan

artículo científico publicado en 2021

Genome-wide signals of drift and local adaptation during rapid lineage divergence in a songbird

artículo científico publicado en 2018

Genome-wide ultraconserved elements exhibit higher phylogenetic informativeness than traditional gene markers in percomorph fishes

artículo científico publicado en 2015

Habitat structure and colony structure constrain extrapair paternity in a colonial bird

Hidden histories of gene flow in highland birds revealed with genomic markers

artículo científico publicado en 2016

High phylogenetic utility of an ultraconserved element probe set designed for Arachnida

artículo científico publicado en 2016

Historical specimens and the limits of subspecies phylogenomics in the New World quails (Odontophoridae)

Implementing and testing the multispecies coalescent model: A valuable paradigm for phylogenomics

artículo científico publicado en 2016

Implications of headwater contact zones for the riverine barrier hypothesis: a case study of the Blue-capped Manakin (Lepidothrix coronata)

artículo científico publicado en 2023

Incongruence among different mitochondrial regions: a case study using complete mitogenomes.

artículo científico publicado en 2014

Insight from an Ultraconserved Element Bait Set Designed for Hemipteran Phylogenetics Integrated with Genomic Resources

scholarly article by Troy J Kieran published in October 2018

Interactive effects of male and female age on extra-pair paternity in a socially monogamous seabird

artículo científico publicado en 2014

Microsatellite markers for eastern hemlock (Tsuga canadensis).

artículo científico publicado en 2008

More than 1000 ultraconserved elements provide evidence that turtles are the sister group of archosaurs ⬇️

artículo científico publicado en 2012

Next-generation phylogenetics takes root

artículo científico publicado en 2013

Not All Sequence Tags Are Created Equal: Designing and Validating Sequence Identification Tags Robust to Indels ⬇️

artículo científico publicado el 10 de agosto de 2012

PHYLUCE is a software package for the analysis of conserved genomic loci

artículo científico publicado en 2015

Phylogenetic relationships of diurnal, phytotelm-breeding Melanophryniscus (Anura: Bufonidae) based on mitogenomic data.

artículo científico

Phylogenomic Systematics of Ostariophysan fishes: Ultraconserved Elements Support the Surprising Non-monophyly of Characiformes

artículo científico publicado en 2017

Phylogenomic analyses data of the avian phylogenomics project

artículo científico publicado en 2015

Phylogenomic analysis of Lake Malawi cichlid fishes: Further evidence that the three-stage model of diversification does not fit.

artículo científico publicado en 2017

Phylogenomic analysis of a rapid radiation of misfit fishes (Syngnathiformes) using ultraconserved elements

artículo científico publicado en 2017

Phylogenomic analysis of carangimorph fishes reveals flatfish asymmetry arose in a blink of the evolutionary eye

artículo científico publicado en 2016

Phylogenomic species delimitation in microendemic frogs of the Brazilian Atlantic Forest

scientific article published on 17 September 2019

Primer3--new capabilities and interfaces

artículo científico publicado en 2012

Prolonged morphological expansion of spiny-rayed fishes following the end-Cretaceous

scientific article published in 2022

RADcap: sequence capture of dual-digest RADseq libraries with identifiable duplicates and reduced missing data

artículo científico publicado en 2016

Relating belowground microbial composition to the taxonomic, phylogenetic, and functional trait distributions of trees in a tropical forest.

artículo científico publicado en 2015

Replicated divergence in cichlid radiations mirrors a major vertebrate innovation

artículo científico publicado en 2016

Resolving Deep Nodes in an Ancient Radiation of Neotropical Fishes in the Presence of Conflicting Signals from Incomplete Lineage Sorting

artículo científico publicado en 2019

Sequence Capture versus Restriction Site Associated DNA Sequencing for Shallow Systematics

artículo científico publicado en 2016

Sequence capture of ultraconserved elements from bird museum specimens

artículo científico publicado en 2015

Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes

artículo científico publicado en 2012

Significant variance in genetic diversity among populations of Schistosoma haematobium detected using microsatellite DNA loci from a genome-wide database

artículo científico publicado en 2013

Speciation in Western Scrub-Jays, Haldane's rule, and genetic clines in secondary contact

artículo científico publicado en 2014

Target capture and massively parallel sequencing of ultraconserved elements for comparative studies at shallow evolutionary time scales

artículo científico publicado en 2013

Target enrichment of ultraconserved elements from arthropods provides a genomic perspective on relationships among Hymenoptera

artículo científico publicado en 2015

Tectonic collision and uplift of Wallacea triggered the global songbird radiation

artículo científico publicado en 2016

Tetranucleotide microsatellite loci from the black bear (Ursus americanus)

artículo científico publicado en 2008

The critical importance of vouchers in genomics

artículo científico publicado en 2021

The drivers of tropical speciation

artículo científico publicado en 2014

The evolution of peafowl and other taxa with ocelli (eyespots): a phylogenomic approach.

artículo científico publicado en 2014

Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs

artículo científico publicado en 2014

Translocation to a fragmented landscape: survival, movement, and site fidelity of Northern Bobwhites

artículo científico publicado en 2010

Ultraconserved elements (UCEs) illuminate the population genomics of a recent, high-latitude avian speciation event

scientific article published on 05 October 2018

Ultraconserved elements (UCEs) illuminate the population genomics of a recent, high-latitude avian speciation event

Ultraconserved elements anchor thousands of genetic markers spanning multiple evolutionary timescales

artículo científico publicado en 2012

Ultraconserved elements are novel phylogenomic markers that resolve placental mammal phylogeny when combined with species-tree analysis

artículo científico publicado en 2012

Universal target-enrichment baits for anthozoan (Cnidaria) phylogenomics: New approaches to long-standing problems.

artículo científico publicado en 2017

Use of sonic tomography to detect and quantify wood decay in living trees.

artículo científico publicado en 2016

Using UCEs to track the influence of sea-level change on leafy seadragon populations

artículo científico publicado en 2020

What are the roles oftaxon sampling and model fit in tests ofcyto-nuclear discordance using avian mitogenomic data?

artículo científico publicado en 2018

Whole-genome analyses resolve early branches in the tree of life of modern birds

artículo científico publicado en 2014

Widespread sympatry in a species-rich clade of marine fishes (Carangoidei)

msatcommander: detection of microsatellite repeat arrays and automated, locus‐specific primer design ⬇️

artículo científico publicado el 1 de enero de 2008

Plantilla:Harvey et al., 2020

artículo científico publicado en 2020

Lista de obras de Brant C. Faircloth

A Highly Contiguous Reference Genome for Northern Bobwhite (Colinus virginianus)

A Phylogenomic Perspective on the Radiation of Ray-Finned Fishes Based upon Targeted Sequencing of Ultraconserved Elements (UCEs)

A Target Enrichment Bait Set for Studying Relationships among Ostariophysan Fishes

A phylogenomic analysis of turtles ⬇️

A phylogenomic framework for pelagiarian fishes (Acanthomorpha: Percomorpha) highlights mosaic radiation in the open ocean

A phylogeny of birds based on over 1,500 loci collected by target enrichment and high-throughput sequencing

Adapterama I: Universal stubs and primers for thousands of dual-indexed Illumina libraries (iTru & iNext)

Adapterama I: universal stubs and primers for 384 unique dual-indexed or 147,456 combinatorially-indexed Illumina libraries (iTru & iNext)

Adapterama II: universal amplicon sequencing on illumina platforms (TaggiMatrix)

Adapterama III: Quadruple-indexed, double/triple-enzyme RADseq libraries (2RAD/3RAD)

Adapterama IV: Sequence Capture of Dual-digest RADseq Libraries with Identifiable Duplicates (RADcap)

Analysis of a Rapid Evolutionary Radiation Using Ultraconserved Elements: Evidence for a Bias in Some Multispecies Coalescent Methods.

Author Correction: Dense sampling of bird diversity increases power of comparative genomics

Avoiding Missing Data Biases in Phylogenomic Inference: An Empirical Study in the Landfowl (Aves: Galliformes).

Capturing Darwin's dream

Comparison of ultraconserved elements (UCEs) to microsatellite markers for the study of avian hybrid zones: a test in Aphelocoma jays

Complexity of avian evolution revealed by family-level genomes

Conflicting Evolutionary Histories of the Mitochondrial and Nuclear Genomes in New World Myotis Bats.

Dense sampling of bird diversity increases power of comparative genomics

Developing a community-based genetic nomenclature for anole lizards

Development and characterization of microsatellite loci for common raven (Corvus corax) and cross species amplification in other Corvidae

Development and characterization of microsatellite loci for two species of Beringian birds, rock sandpiper (Calidris ptilocnemis) and Pacific wren (Troglodytes pacificus)

Divergence, gene flow, and speciation in eight lineages of trans-Beringian birds

Dry habitats were crucibles of domestication in the evolution of agriculture in ants.

Earth history and the passerine superradiation

Explosive diversification of marine fishes at the Cretaceous–Palaeogene boundary

Extensive paraphyly in the typical owl family (Strigidae)

Genome assemblies for two Neotropical trees: <i>Jacaranda copaia</i> and <i>Handroanthus guayacan</i>

Genome-wide signals of drift and local adaptation during rapid lineage divergence in a songbird

Genome-wide signals of drift and local adaptation during rapid lineage divergence in a songbird

Genome-wide ultraconserved elements exhibit higher phylogenetic informativeness than traditional gene markers in percomorph fishes

Habitat structure and colony structure constrain extrapair paternity in a colonial bird

Hidden histories of gene flow in highland birds revealed with genomic markers

High phylogenetic utility of an ultraconserved element probe set designed for Arachnida

Historical specimens and the limits of subspecies phylogenomics in the New World quails (Odontophoridae)

Implementing and testing the multispecies coalescent model: A valuable paradigm for phylogenomics

Implications of headwater contact zones for the riverine barrier hypothesis: a case study of the Blue-capped Manakin (<i>Lepidothrix coronata</i>)

Incongruence among different mitochondrial regions: a case study using complete mitogenomes.

Insight from an Ultraconserved Element Bait Set Designed for Hemipteran Phylogenetics Integrated with Genomic Resources

Interactive effects of male and female age on extra-pair paternity in a socially monogamous seabird

Microsatellite markers for eastern hemlock (Tsuga canadensis).

More than 1000 ultraconserved elements provide evidence that turtles are the sister group of archosaurs ⬇️

Next-generation phylogenetics takes root

Not All Sequence Tags Are Created Equal: Designing and Validating Sequence Identification Tags Robust to Indels ⬇️

PHYLUCE is a software package for the analysis of conserved genomic loci

Phylogenetic relationships of diurnal, phytotelm-breeding Melanophryniscus (Anura: Bufonidae) based on mitogenomic data.

Phylogenomic Systematics of Ostariophysan fishes: Ultraconserved Elements Support the Surprising Non-monophyly of Characiformes

Phylogenomic analyses data of the avian phylogenomics project

Phylogenomic analysis of Lake Malawi cichlid fishes: Further evidence that the three-stage model of diversification does not fit.

Phylogenomic analysis of a rapid radiation of misfit fishes (Syngnathiformes) using ultraconserved elements

Phylogenomic analysis of carangimorph fishes reveals flatfish asymmetry arose in a blink of the evolutionary eye

Phylogenomic species delimitation in microendemic frogs of the Brazilian Atlantic Forest

Primer3--new capabilities and interfaces

Prolonged morphological expansion of spiny-rayed fishes following the end-Cretaceous

RADcap: sequence capture of dual-digest RADseq libraries with identifiable duplicates and reduced missing data

Relating belowground microbial composition to the taxonomic, phylogenetic, and functional trait distributions of trees in a tropical forest.

Replicated divergence in cichlid radiations mirrors a major vertebrate innovation

Resolving Deep Nodes in an Ancient Radiation of Neotropical Fishes in the Presence of Conflicting Signals from Incomplete Lineage Sorting

Sequence Capture versus Restriction Site Associated DNA Sequencing for Shallow Systematics

Sequence capture of ultraconserved elements from bird museum specimens

Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes

Significant variance in genetic diversity among populations of Schistosoma haematobium detected using microsatellite DNA loci from a genome-wide database

Speciation in Western Scrub-Jays, Haldane's rule, and genetic clines in secondary contact

Target capture and massively parallel sequencing of ultraconserved elements for comparative studies at shallow evolutionary time scales

Target enrichment of ultraconserved elements from arthropods provides a genomic perspective on relationships among Hymenoptera

Tectonic collision and uplift of Wallacea triggered the global songbird radiation

Tetranucleotide microsatellite loci from the black bear (Ursus americanus)

The critical importance of vouchers in genomics

The drivers of tropical speciation

The evolution of peafowl and other taxa with ocelli (eyespots): a phylogenomic approach.

Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs

Translocation to a fragmented landscape: survival, movement, and site fidelity of Northern Bobwhites

Ultraconserved elements (UCEs) illuminate the population genomics of a recent, high-latitude avian speciation event

Ultraconserved elements (UCEs) illuminate the population genomics of a recent, high-latitude avian speciation event

Ultraconserved elements (UCEs) illuminate the population genomics of a recent, high-latitude avian speciation event

Ultraconserved elements anchor thousands of genetic markers spanning multiple evolutionary timescales

Ultraconserved elements are novel phylogenomic markers that resolve placental mammal phylogeny when combined with species-tree analysis

Universal target-enrichment baits for anthozoan (Cnidaria) phylogenomics: New approaches to long-standing problems.

Use of sonic tomography to detect and quantify wood decay in living trees.