Lista de obras - Shmuel Pietrokovski - Dominio Público Uruguay

A helix-turn-helix DNA-binding motif predicted for transposases of DNA transposons

artículo científico publicado en 1997

A new intein in cyanobacteria and its significance for the spread of inteins

artículo científico publicado en 1996

A pair-to-pair amino acids substitution matrix and its applications for protein structure prediction.

artículo científico publicado en 2007

Activity, specificity and structure of I-Bth0305I: a representative of a new homing endonuclease family

artículo científico publicado en 2011

Algal viruses with distinct intraspecies host specificities include identical intein elements

artículo científico publicado en 2005

An atypical naturally split intein engineered for highly efficient protein labeling

artículo científico publicado en 2014

Atg8: an autophagy-related ubiquitin-like protein family

artículo científico publicado en 2011

Automated construction and graphical presentation of protein blocks from unaligned sequences

artículo científico publicado en 1995

Bacterial intein-like domains of predatory bacteria: a new domain type characterized in Bdellovibrio bacteriovorus

artículo científico publicado en 2009

Blocks+: a non-redundant database of protein alignment blocks derived from multiple compilations

artículo científico publicado en 1999

Blocks-based methods for detecting protein homology

artículo científico publicado en 2000

Breaking up is hard to do.

artículo científico publicado en 1998

By their genes ye shall know them: genomic signatures of predatory bacteria

artículo científico publicado en 2012

Comparing nucleotide and protein sequences by linguistic methods

artículo científico publicado en 1994

Configuration of the catalytic GIY-YIG domain of intron endonuclease I-TevI: coincidence of computational and molecular findings

artículo científico publicado en 1999

Consensus-degenerate hybrid oligonucleotide primers for amplification of distantly related sequences

artículo científico publicado en 1998

Conserved sequence features of inteins (protein introns) and their use in identifying new inteins and related proteins

artículo científico publicado en 1994

Consistency analysis of similarity between multiple alignments: prediction of protein function and fold structure from analysis of local sequence motifs

artículo científico publicado en 2001

Distinct molecular regulation of glycogen synthase kinase-3alpha isozyme controlled by its N-terminal region: functional role in calcium/calpain signaling

artículo científico publicado en 2011

Distribution and function of new bacterial intein-like protein domains

artículo científico publicado en 2003

Distribution of split DnaE inteins in cyanobacteria

artículo científico publicado en 2003

Doublecortin mutations cluster in evolutionarily conserved functional domains

artículo científico publicado en 2000

Enhanced statistics for local alignment of multiple alignments improves prediction of protein function and structure

artículo científico publicado en 2005

Exploring protein homology with the Blocks server

artículo científico publicado en 1998

Fine-tuning an engineered intein

Fractured genes: a novel genomic arrangement involving new split inteins and a new homing endonuclease family

artículo científico publicado en 2009

GENOME MAPS 8: Building Gene Families

artículo científico publicado en 1997

Gene families: the taxonomy of protein paralogs and chimeras

artículo científico publicado en 1997

Hsp90 Recognizes a Common Surface on Client Kinases

artículo científico publicado en 2006

Identification of a virus intein and a possible variation in the protein-splicing reaction ⬇️

artículo científico publicado el 10 de septiembre de 1998

Identification of new signaling components in the Drosophila genome sequence

artículo científico publicado en 2001

Identification of plant RAD52 homologs and characterization of the Arabidopsis thaliana RAD52-like genes

article by Aviva Samach et al published December 2011 in The Plant Cell

Imported sequences in the mitochondrial yeast genome identified by nucleotide linguistics

artículo científico publicado en 1992

In and out: an analysis of epibiotic vs periplasmic bacterial predators

artículo científico publicado en 2013

Increased coverage of protein families with the blocks database servers

artículo científico publicado en 2000

Intein spread and extinction in evolution

artículo científico publicado en 2001

Isolation and characterization of a split B-type DNA polymerase from the archaeon Methanobacterium thermoautotrophicum deltaH.

artículo científico publicado en 1999

Linguistic Measure of Taxonomic and Functional Relatedness of Nucleotide Sequences

Meig1 deficiency causes a severe defect in mouse spermatogenesis

artículo científico publicado en 2009

Mitochondrial carrier homolog 2 is a target of tBID in cells signaled to die by tumor necrosis factor alpha

artículo científico publicado en 2005

Modular organization of inteins and C‐terminal autocatalytic domains ⬇️

artículo científico publicado el 1 de enero de 1998

Mutation detection with next-generation resequencing through a mediator genome

artículo científico publicado en 2010

Myosin drives autophagy in a pathway linking Atg1 to Atg9.

artículo científico publicado en 2011

Network Analysis of Protein Structures Identifies Functional Residues

article

New features of the Blocks Database servers

artículo científico publicado en 1999

New insights into the autoinhibition mechanism of glycogen synthase kinase-3beta

artículo científico publicado en 2008

New modularity of DAP-kinases: alternative splicing of the DRP-1 gene produces a ZIPk-like isoform

artículo científico publicado en 2011

New type of polyubiquitin-like genes with intein-like autoprocessing domains

artículo científico publicado en 2004

New types of conserved sequence domains in DNA-binding regions of homing endonucleases

artículo científico publicado en 2003

Nuclear import of ho endonuclease utilizes two nuclear localization signals and four importins of the ribosomal import system

artículo científico publicado en 2006

Occurrence of protein structure elements in conserved sequence regions.

artículo científico publicado en 2007

Omics data management and annotation

artículo científico publicado en 2011

One-Block CYRCA: an automated procedure for identifying multiple-block alignments from single block queries

artículo científico publicado en 2005

Oriented covalent immobilization of antibodies for measurement of intermolecular binding forces between zipper-like contact surfaces of split inteins

artículo científico publicado en 2013

Protein splicing and auto-cleavage of bacterial intein-like domains lacking a C'-flanking nucleophilic residue

artículo científico publicado en 2004

Protein splicing of inteins with atypical glutamine and aspartate C-terminal residues

artículo científico publicado en 2003

Proteome-based comparative analyses of growth stages reveal new cell cycle-dependent functions in the predatory bacterium Bdellovibrio bacteriovorus

artículo científico publicado en 2008

Rapid assessment of correlated amino acids from pair-to-pair (P2P) substitution matrices

artículo científico publicado en 2007

Recent enhancements to the Blocks Database servers

artículo científico publicado en 1997

Refining intra-protein contact prediction by graph analysis

artículo científico publicado en 2007

Searching databases of conserved sequence regions by aligning protein multiple-alignments

artículo científico publicado en 1996

Selective loss of glycogen synthase kinase-3α in birds reveals distinct roles for GSK-3 isozymes in tau phosphorylation

scholarly article by Lina Tsaadon Alon published in March 2011

Splicing of the mycobacteriophage Bethlehem DnaB intein: identification of a new mechanistic class of inteins that contain an obligate block F nucleophile.

artículo científico publicado en 2009

Substrate competitive GSK-3 inhibitors - strategy and implications

artículo científico publicado en 2009

Superior performance in protein homology detection with the Blocks Database servers

artículo científico

Synergism of type I and type II Interferons in stimulating the activity of the same DNA enhancer

artículo científico publicado en 1990

The Blocks database--a system for protein classification

artículo científico publicado en 1996

The autophagy-associated Atg8 gene family operates both under favourable growth conditions and under starvation stresses in Arabidopsis plants

artículo científico publicado en 2005

Trans protein splicing of cyanobacterial split inteins in endogenous and exogenous combinations.

artículo científico publicado en 2007

USH3A transcripts encode clarin-1, a four-transmembrane-domain protein with a possible role in sensory synapses

artículo científico publicado en 2002

Using the blocks database to recognize functional domains

artículo científico publicado en 2002

ZIPK: a unique case of murine-specific divergence of a conserved vertebrate gene

artículo científico publicado en 2007

Lista de obras de Shmuel Pietrokovski

A helix-turn-helix DNA-binding motif predicted for transposases of DNA transposons

A new intein in cyanobacteria and its significance for the spread of inteins

A pair-to-pair amino acids substitution matrix and its applications for protein structure prediction.

Activity, specificity and structure of I-Bth0305I: a representative of a new homing endonuclease family

Algal viruses with distinct intraspecies host specificities include identical intein elements

An atypical naturally split intein engineered for highly efficient protein labeling

Atg8: an autophagy-related ubiquitin-like protein family

Automated construction and graphical presentation of protein blocks from unaligned sequences

Bacterial intein-like domains of predatory bacteria: a new domain type characterized in Bdellovibrio bacteriovorus

Blocks+: a non-redundant database of protein alignment blocks derived from multiple compilations

Blocks-based methods for detecting protein homology

Breaking up is hard to do.

By their genes ye shall know them: genomic signatures of predatory bacteria

Comparing nucleotide and protein sequences by linguistic methods

Configuration of the catalytic GIY-YIG domain of intron endonuclease I-TevI: coincidence of computational and molecular findings

Consensus-degenerate hybrid oligonucleotide primers for amplification of distantly related sequences

Conserved sequence features of inteins (protein introns) and their use in identifying new inteins and related proteins

Consistency analysis of similarity between multiple alignments: prediction of protein function and fold structure from analysis of local sequence motifs

Distinct molecular regulation of glycogen synthase kinase-3alpha isozyme controlled by its N-terminal region: functional role in calcium/calpain signaling

Distribution and function of new bacterial intein-like protein domains

Distribution of split DnaE inteins in cyanobacteria

Doublecortin mutations cluster in evolutionarily conserved functional domains

Enhanced statistics for local alignment of multiple alignments improves prediction of protein function and structure

Exploring protein homology with the Blocks server

Fine-tuning an engineered intein

Fractured genes: a novel genomic arrangement involving new split inteins and a new homing endonuclease family

GENOME MAPS 8: Building Gene Families

Gene families: the taxonomy of protein paralogs and chimeras

Hsp90 Recognizes a Common Surface on Client Kinases

Identification of a virus intein and a possible variation in the protein-splicing reaction ⬇️

Identification of new signaling components in the Drosophila genome sequence

Identification of plant RAD52 homologs and characterization of the Arabidopsis thaliana RAD52-like genes

Imported sequences in the mitochondrial yeast genome identified by nucleotide linguistics

In and out: an analysis of epibiotic vs periplasmic bacterial predators

Increased coverage of protein families with the blocks database servers

Intein spread and extinction in evolution

Isolation and characterization of a split B-type DNA polymerase from the archaeon Methanobacterium thermoautotrophicum deltaH.

Linguistic Measure of Taxonomic and Functional Relatedness of Nucleotide Sequences

Meig1 deficiency causes a severe defect in mouse spermatogenesis

Mitochondrial carrier homolog 2 is a target of tBID in cells signaled to die by tumor necrosis factor alpha

Modular organization of inteins and C‐terminal autocatalytic domains ⬇️

Mutation detection with next-generation resequencing through a mediator genome

Myosin drives autophagy in a pathway linking Atg1 to Atg9.

Network Analysis of Protein Structures Identifies Functional Residues

New features of the Blocks Database servers

New insights into the autoinhibition mechanism of glycogen synthase kinase-3beta

New modularity of DAP-kinases: alternative splicing of the DRP-1 gene produces a ZIPk-like isoform

New type of polyubiquitin-like genes with intein-like autoprocessing domains

New types of conserved sequence domains in DNA-binding regions of homing endonucleases

Nuclear import of ho endonuclease utilizes two nuclear localization signals and four importins of the ribosomal import system

Occurrence of protein structure elements in conserved sequence regions.

Omics data management and annotation

One-Block CYRCA: an automated procedure for identifying multiple-block alignments from single block queries

Oriented covalent immobilization of antibodies for measurement of intermolecular binding forces between zipper-like contact surfaces of split inteins

Protein splicing and auto-cleavage of bacterial intein-like domains lacking a C'-flanking nucleophilic residue

Protein splicing of inteins with atypical glutamine and aspartate C-terminal residues

Proteome-based comparative analyses of growth stages reveal new cell cycle-dependent functions in the predatory bacterium Bdellovibrio bacteriovorus

Rapid assessment of correlated amino acids from pair-to-pair (P2P) substitution matrices

Recent enhancements to the Blocks Database servers

Refining intra-protein contact prediction by graph analysis

Searching databases of conserved sequence regions by aligning protein multiple-alignments

Selective loss of glycogen synthase kinase-3α in birds reveals distinct roles for GSK-3 isozymes in tau phosphorylation

Splicing of the mycobacteriophage Bethlehem DnaB intein: identification of a new mechanistic class of inteins that contain an obligate block F nucleophile.

Substrate competitive GSK-3 inhibitors - strategy and implications

Superior performance in protein homology detection with the Blocks Database servers

Synergism of type I and type II Interferons in stimulating the activity of the same DNA enhancer

The Blocks database--a system for protein classification

The autophagy-associated Atg8 gene family operates both under favourable growth conditions and under starvation stresses in Arabidopsis plants

Trans protein splicing of cyanobacterial split inteins in endogenous and exogenous combinations.

USH3A transcripts encode clarin-1, a four-transmembrane-domain protein with a possible role in sensory synapses

Using the blocks database to recognize functional domains

ZIPK: a unique case of murine-specific divergence of a conserved vertebrate gene