Lista de obras - Robert Lanfear - Dominio Público Uruguay

A comprehensive toolkit to enable MinION long-read sequencing in any laboratory

A generation time effect on the rate of molecular evolution in invertebrates

artículo científico publicado en 2010

Ancestral Notch-mediated segmentation revealed in the cockroach Periplaneta americana

artículo científico publicado en 2008

Are the Deuterostome Posterior Hox Genes a Fast-Evolving Class? ⬇️

artículo científico publicado el 1 de enero de 2010

Assembly of chloroplast genomes with long- and short-read data: a comparison of approaches using Eucalyptus pauciflora as a test case

AusTraits, a curated plant trait database for the Australian flora ⬇️

publication published on 30 September 2021

Automatic selection of partitioning schemes for phylogenetic analyses using iterative k-means clustering of site rates

artículo científico publicado en 2015

Bayesian estimation of substitution rates from ancient DNA sequences with low information content

artículo científico publicado en 2011

Body mass-corrected molecular rate for bird mitochondrial DNA.

artículo científico publicado en 2016

Broad activation of latent HIV-1 in vivo

artículo científico publicado en 2016

Correction: Differences in gene expression within a striking phenotypic mosaic Eucalyptus tree that varies in susceptibility to herbivory.

artículo científico publicado en 2013

Diversification and the rate of molecular evolution: no evidence of a link in mammals

artículo científico publicado en 2011

Do plants have a segregated germline?

artículo científico publicado en 2018

Domestication and the mitochondrial genome: comparing patterns and rates of molecular evolution in domesticated mammals and birds and their wild relatives

artículo científico publicado en 2014

Estimating Improved Partitioning Schemes for Ultraconserved Elements.

artículo científico publicado en 2018

Estimating phylogenies for species assemblages: a complete phylogeny for the past and present native birds of New Zealand

artículo científico publicado en 2011

Estimating the Effective Sample Size of Tree Topologies from Bayesian Phylogenetic Analyses

artículo científico publicado en 2016

Evidence of Experimental Bias in the Life Sciences: Why We Need Blind Data Recording

artículo científico publicado en 2015

Evolutionary History of the Hymenoptera

artículo científico publicado en 2017

Exploring the Relationships between Mutation Rates, Life History, Genome Size, Environment, and Species Richness in Flowering Plants

artículo científico publicado en 2015

Gender differences in conference presentations: a consequence of self-selection?

artículo científico publicado en 2014

Generation time, life history and the substitution rate of neutral mutations.

artículo científico publicado en 2014

Genomic approaches to selection in outcrossing perennials: focus on essential oil crops

artículo científico

Harnessing the MinION: An example of how to establish long-read sequencing in a laboratory using challenging plant tissue from Eucalyptus pauciflora

article

INSECT PHYLOGENOMICS. Response to Comment on "Phylogenomics resolves the timing and pattern of insect evolution".

artículo científico publicado en 2015

Improved characterisation of among-lineage rate variation in cetacean mitogenomes using codon-partitioned relaxed clocks

artículo científico publicado en 2010

Inferring population connectivity across the range of the purple-crowned fairy-wren (Malurus coronatus) from mitochondrial DNA and morphology: implications for conservation management

scientific article published in 2012

Linking Branch Lengths Across Loci Provides the Best Fit for Phylogenetic Inference

Metabolic rate does not calibrate the molecular clock

artículo científico publicado en 2007

MinIONQC: fast and simple quality control for MinION sequencing data

article by Robert Lanfear et al published 1 February 2019 in Computer applications in the biosciences : CABIOS

Mito-communications

artículo científico publicado en 2011

Mito-communications

artículo científico publicado en 2012

Mito-communications

Mito-communications.

artículo científico publicado en 2010

Molecular Evolutionary Consequences of Island Colonization

artículo científico publicado en 2016

Mutation rate is linked to diversification in birds

artículo científico publicado en 2010

New methods to calculate concordance factors for phylogenomic datasets

article published in 2018

Open access is worth considering: a reply to Agrawal

artículo científico publicado en 2014

Parasitic plants have increased rates of molecular evolution across all three genomes

artículo científico publicado en 2013

PartitionFinder 2: New Methods for Selecting Partitioned Models of Evolution for Molecular and Morphological Phylogenetic Analyses

artículo científico publicado en 2016

PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

artículo científico publicado en 2012

Phylogenetic uncertainty can bias the number of evolutionary transitions estimated from ancestral state reconstruction methods

artículo científico publicado en 2015

Phylogenomics resolves the timing and pattern of insect evolution

artículo científico publicado en 2014

Plant Mating Systems Often Vary Widely Among Populations

article

Population size and the rate of evolution.

artículo científico

Primate phylogenomics uncovers multiple rapid radiations and ancient interspecific introgression

scientific article published on 03 December 2020

Public Data Archiving in Ecology and Evolution: How Well Are We Doing?

artículo científico publicado en 2015

RWTY (R We There Yet): An R Package for Examining Convergence of Bayesian Phylogenetic Analyses

artículo científico publicado en 2017

Rapid evolution of a novel signalling mechanism by concerted duplication and divergence of a BMP ligand and its extracellular modulators

artículo científico publicado en 2010

Reconstructing past species assemblages reveals the changing patterns and drivers of extinction through time

artículo científico publicado en 2012

Reply to Englund: Molecular evolution and diversification--Counting species is better than counting nodes when the phylogeny is unknown

article published in the Proceedings of the National Academy of Sciences of the United States of America

Selecting optimal partitioning schemes for phylogenomic datasets

artículo científico publicado en 2014

Statistical Tests between Competing Hypotheses of Hox Cluster Evolution

article

Taller plants have lower rates of molecular evolution

artículo científico publicado en 2013

Testing for phylogenetic signal in single-cell RNA-seq data

The Evolution of Clutch Size in Hosts of Avian Brood Parasites.

artículo científico publicado en 2017

The Prevalence and Impact of Model Violations in Phylogenetics

scholarly article published 2 November 2018

The biogeographical boundaries of northern Australia: evidence from ecological niche models and a multi-locus phylogeny ofUperoleiatoadlets (Anura: Myobatrachidae)

article

The draft nuclear genome assembly of Eucalyptus pauciflora: a pipeline for comparing de novo assemblies

artículo científico publicado en 2020

The effects of partitioning on phylogenetic inference

artículo científico publicado en 2015

The evolution of queen pheromones in the ant genus Lasius

artículo científico publicado en 2013

The impact of calibration and clock-model choice on molecular estimates of divergence times

artículo científico publicado en 2014

The influence of non-random species sampling on macroevolutionary and macroecological inference from phylogenies

scholarly article by Xia Hua & Robert Lanfear published 27 February 2018 in Methods in Ecology and Evolution

The local-clock permutation test: a simple test to compare rates of molecular evolution on phylogenetic trees ⬇️

artículo científico publicado el 5 de noviembre de 2010

The mitochondrial genome structure of Xenoturbella bocki (phylum Xenoturbellida) is ancestral within the deuterostomes

artículo científico publicado en 2009

The unusual occurrence of green algal balls of Chaetomorpha linum on a beach in Sydney, Australia

article

The yield of essential oils in Melaleuca alternifolia (Myrtaceae) is regulated through transcript abundance of genes in the MEP pathway

artículo científico publicado en 2013

Time-dependent rates of molecular evolution

scientific article published on 08 July 2011

Timing the extant avian radiation: The rise of modern birds, and the importance of modeling molecular rate variation

Troubleshooting public data archiving: suggestions to increase participation

artículo científico publicado en 2014

Updated site concordance factors minimize effects of homoplasy and taxon sampling

artículo científico publicado en 2022

Watching the clock: studying variation in rates of molecular evolution between species

scientific article published on 23 July 2010

Lista de obras de Robert Lanfear

A comprehensive toolkit to enable MinION long-read sequencing in any laboratory

A generation time effect on the rate of molecular evolution in invertebrates

Ancestral Notch-mediated segmentation revealed in the cockroach Periplaneta americana

Are the Deuterostome Posterior Hox Genes a Fast-Evolving Class? ⬇️

Assembly of chloroplast genomes with long- and short-read data: a comparison of approaches using Eucalyptus pauciflora as a test case

AusTraits, a curated plant trait database for the Australian flora ⬇️

Automatic selection of partitioning schemes for phylogenetic analyses using iterative k-means clustering of site rates

Bayesian estimation of substitution rates from ancient DNA sequences with low information content

Body mass-corrected molecular rate for bird mitochondrial DNA.

Broad activation of latent HIV-1 in vivo

Correction: Differences in gene expression within a striking phenotypic mosaic Eucalyptus tree that varies in susceptibility to herbivory.

Diversification and the rate of molecular evolution: no evidence of a link in mammals

Do plants have a segregated germline?

Domestication and the mitochondrial genome: comparing patterns and rates of molecular evolution in domesticated mammals and birds and their wild relatives

Estimating Improved Partitioning Schemes for Ultraconserved Elements.

Estimating phylogenies for species assemblages: a complete phylogeny for the past and present native birds of New Zealand

Estimating the Effective Sample Size of Tree Topologies from Bayesian Phylogenetic Analyses

Evidence of Experimental Bias in the Life Sciences: Why We Need Blind Data Recording

Evolutionary History of the Hymenoptera

Exploring the Relationships between Mutation Rates, Life History, Genome Size, Environment, and Species Richness in Flowering Plants

Gender differences in conference presentations: a consequence of self-selection?

Generation time, life history and the substitution rate of neutral mutations.

Genomic approaches to selection in outcrossing perennials: focus on essential oil crops

Harnessing the MinION: An example of how to establish long-read sequencing in a laboratory using challenging plant tissue from Eucalyptus pauciflora

INSECT PHYLOGENOMICS. Response to Comment on "Phylogenomics resolves the timing and pattern of insect evolution".

Improved characterisation of among-lineage rate variation in cetacean mitogenomes using codon-partitioned relaxed clocks

Inferring population connectivity across the range of the purple-crowned fairy-wren (Malurus coronatus) from mitochondrial DNA and morphology: implications for conservation management

Linking Branch Lengths Across Loci Provides the Best Fit for Phylogenetic Inference

Metabolic rate does not calibrate the molecular clock

MinIONQC: fast and simple quality control for MinION sequencing data

Mito-communications

Mito-communications

Mito-communications

Mito-communications

Mito-communications

Mito-communications.

Molecular Evolutionary Consequences of Island Colonization

Mutation rate is linked to diversification in birds

New methods to calculate concordance factors for phylogenomic datasets

Open access is worth considering: a reply to Agrawal

Parasitic plants have increased rates of molecular evolution across all three genomes

PartitionFinder 2: New Methods for Selecting Partitioned Models of Evolution for Molecular and Morphological Phylogenetic Analyses

PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

Phylogenetic uncertainty can bias the number of evolutionary transitions estimated from ancestral state reconstruction methods

Phylogenomics resolves the timing and pattern of insect evolution

Plant Mating Systems Often Vary Widely Among Populations

Population size and the rate of evolution.

Primate phylogenomics uncovers multiple rapid radiations and ancient interspecific introgression

Public Data Archiving in Ecology and Evolution: How Well Are We Doing?

RWTY (R We There Yet): An R Package for Examining Convergence of Bayesian Phylogenetic Analyses

Rapid evolution of a novel signalling mechanism by concerted duplication and divergence of a BMP ligand and its extracellular modulators

Reconstructing past species assemblages reveals the changing patterns and drivers of extinction through time

Reply to Englund: Molecular evolution and diversification--Counting species is better than counting nodes when the phylogeny is unknown

Selecting optimal partitioning schemes for phylogenomic datasets

Statistical Tests between Competing Hypotheses of Hox Cluster Evolution

Taller plants have lower rates of molecular evolution

Testing for phylogenetic signal in single-cell RNA-seq data

The Evolution of Clutch Size in Hosts of Avian Brood Parasites.

The Prevalence and Impact of Model Violations in Phylogenetics

The biogeographical boundaries of northern Australia: evidence from ecological niche models and a multi-locus phylogeny ofUperoleiatoadlets (Anura: Myobatrachidae)

The draft nuclear genome assembly of Eucalyptus pauciflora: a pipeline for comparing de novo assemblies

The effects of partitioning on phylogenetic inference

The evolution of queen pheromones in the ant genus Lasius

The impact of calibration and clock-model choice on molecular estimates of divergence times

The influence of non-random species sampling on macroevolutionary and macroecological inference from phylogenies

The local-clock permutation test: a simple test to compare rates of molecular evolution on phylogenetic trees ⬇️

The mitochondrial genome structure of Xenoturbella bocki (phylum Xenoturbellida) is ancestral within the deuterostomes

The unusual occurrence of green algal balls of Chaetomorpha linum on a beach in Sydney, Australia

The yield of essential oils in Melaleuca alternifolia (Myrtaceae) is regulated through transcript abundance of genes in the MEP pathway

Time-dependent rates of molecular evolution

Timing the extant avian radiation: The rise of modern birds, and the importance of modeling molecular rate variation

Troubleshooting public data archiving: suggestions to increase participation

Updated site concordance factors minimize effects of homoplasy and taxon sampling

Watching the clock: studying variation in rates of molecular evolution between species