Lista de obras - Stephane Rombauts - Dominio Público Uruguay

'Nebbiolo' genome assembly allows surveying the occurrence and functional implications of genomic structural variations in grapevines (Vitis vinifera L.).

artículo científico publicado en 2022

A Gibbs sampling method to detect overrepresented motifs in the upstream regions of coexpressed genes.

artículo científico publicado en 2002

A Snapshot of the Emerging Tomato Genome Sequence

A genomic analysis and transcriptomic atlas of gene expression in Psoroptes ovis reveals feeding- and stage-specific patterns of allergen expression

artículo científico publicado en 2019

A link between host plant adaptation and pesticide resistance in the polyphagous spider mite Tetranychus urticae

artículo científico publicado en 2012

A molecular timetable for apical bud formation and dormancy induction in poplar.

artículo científico publicado en 2007

A new version of the grapevine reference genome assembly (12X.v2) and of its annotation (VCost.v3).

artículo científico publicado en 2017

A symbiotic plant peroxidase involved in bacterial invasion of the tropical legume Sesbania rostrata. ⬇️

artículo científico publicado en 2007

AFLPinSilico, simulating AFLP fingerprints

artículo científico publicado en 2003

AGRONOMICS1: a new resource for Arabidopsis transcriptome profiling

artículo científico publicado en 2009

Aging in legume symbiosis. A molecular view on nodule senescence in Medicago truncatula

artículo científico publicado en 2006

An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies

artículo científico publicado en 2014

Analysis of RNA-Seq data with TopHat and Cufflinks for genome-wide expression analysis of jasmonate-treated plants and plant cultures

artículo científico publicado en 2013

Analysis of the Olive Fruit Fly Bactrocera oleae Transcriptome and Phylogenetic Classification of the Major Detoxification Gene Families

artículo científico publicado en 2013

Annotation of a 95-kb Populus deltoides genomic sequence reveals a disease resistance gene cluster and novel class I and class II transposable elements

artículo científico publicado en 2004

CLE peptides control Medicago truncatula nodulation locally and systemically.

artículo científico publicado en 2010

Catalase deficiency drastically affects gene expression induced by high light in Arabidopsis thaliana

artículo científico publicado en 2004

CathaCyc, a metabolic pathway database built from Catharanthus roseus RNA-Seq data

artículo científico publicado en 2013

Characterization of two distinct DP-related genes from Arabidopsis thaliana

artículo científico publicado en 2000

Comparative transcriptome analysis reveals common and specific tags for root hair and crack-entry invasion in Sesbania rostrata. ⬇️

artículo científico publicado en 2007

Complex Evolutionary Dynamics of Massively Expanded Chemosensory Receptor Families in an Extreme Generalist Chelicerate Herbivore

artículo científico publicado en 2016

Computational approaches to identify promoters and cis-regulatory elements in plant genomes

artículo científico publicado en 2003

Dietary shifts have consequences for the repertoire of allergens produced by the European house dust mite.

artículo científico publicado en 2017

Draft Genome Assembly of the False Spider Mite

artículo científico publicado en 2019

Draft Genome Assembly of the Poultry Red Mite,

artículo científico publicado en 2018

Draft Genome Assembly of the Sheep Scab Mite, Psoroptes ovis.

artículo científico publicado en 2018

EST data suggest that poplar is an ancient polyploid

artículo científico publicado en 2005

Erratum for Navia et al., "Draft Genome Assembly of the False Spider Mite Brevipalpus yothersi"

scientific article published on 03 July 2019

Flemish soils contain rhizobia partners for Northwestern Europe‐adapted soybean cultivars

scientific article published on 25 February 2022

Functional modules in the Arabidopsis core cell cycle binary protein-protein interaction network

artículo científico publicado en 2010

Gene functionalities and genome structure in Bathycoccus prasinos reflect cellular specializations at the base of the green lineage

artículo científico publicado en 2012

Gene prediction and gene classes in Arabidopsis thaliana

artículo científico publicado en 2000

GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts

artículo científico publicado en 2005

Genome Analyses of the Microalga Picochlorum Provide Insights into the Evolution of Thermotolerance in the Green Lineage

artículo científico publicado en 2018

Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features

artículo científico publicado en 2006

Genome-scale Arabidopsis promoter array identifies targets of the histone acetyltransferase GCN5.

artículo científico publicado en 2008

Genome-wide analysis of core cell cycle genes in Arabidopsis

artículo científico publicado en 2002

Genome-wide analysis of hydrogen peroxide-regulated gene expression in Arabidopsis reveals a high light-induced transcriptional cluster involved in anthocyanin biosynthesis

artículo científico publicado en 2005

Genomewide structural annotation and evolutionary analysis of the type I MADS-box genes in plants

artículo científico publicado en 2003

Genomic evidence that a sexually selected trait captures genome-wide variation and facilitates the purging of genetic load

artículo científico publicado en 2022

Green Evolution and Dynamic Adaptations Revealed by Genomes of the Marine Picoeukaryotes Micromonas

artículo científico publicado en 2009

How many genes are there in plants (... and why are they there)?

artículo científico publicado en 2007

In silico cloning of genes encoding neuropeptides, neurohormones and their putative G-protein coupled receptors in a spider mite.

artículo científico publicado en 2011

Legume genome evolution viewed through the Medicago truncatula and Lotus japonicus genomes

artículo científico publicado en 2006

Microarray analysis of E2Fa-DPa-overexpressing plants uncovers a cross-talking genetic network between DNA replication and nitrogen assimilation

artículo científico publicado en 2003

Moss transcriptome and beyond

artículo científico publicado en 2002

OMSim: a simulator for optical map data.

artículo científico publicado en 2017

Overview of tomato (Solanum lycopersicum) candidate pathogen recognition genes reveals important Solanum R locus dynamics.

artículo científico publicado en 2012

Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp

artículo científico publicado en 2021

Reannotation and extended community resources for the genome of the non-seed plant Physcomitrella patens provide insights into the evolution of plant gene structures and functions

artículo científico publicado en 2013

Search for nodulation-related CLE genes in the genome of Glycine max.

artículo científico publicado en 2011

Seven in absentia proteins affect plant growth and nodulation in Medicago truncatula.

artículo científico publicado en 2008

Systematic analysis of cell-cycle gene expression during Arabidopsis development

artículo científico publicado en 2009

Systematic localization of the Arabidopsis core cell cycle proteins reveals novel cell division complexes

artículo científico publicado en 2009

The 'TranSeq' 3'-end sequencing method for high-throughput transcriptomics and gene space refinement in plant genomes

scientific article published on 29 July 2018

The Chara Genome: Secondary Complexity and Implications for Plant Terrestrialization

article

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

artículo científico publicado en 2006

The Medicago genome provides insight into the evolution of rhizobial symbioses

artículo científico publicado en 2011

The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants

artículo científico publicado en 2007

The absence of the caffeine synthase gene is involved in the naturally decaffeinated status of Coffea humblotiana, a wild species from Comoro archipelago

artículo científico publicado en 2021

The genome of the extremophile Artemia provides insight into strategies to cope with extreme environments

artículo científico publicado en 2021

The metabolic blueprint of Phaeodactylum tricornutum reveals a eukaryotic Entner-Doudoroff glycolytic pathway

artículo científico publicado en 2012

The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation

artículo científico publicado en 2007

Transcriptome analysis during cell division in plants

artículo científico publicado en 2002

Transcriptomic analysis of the poultry red mite, Dermanyssus gallinae, across all stages of the lifecycle

artículo científico publicado en 2021

Virus-host coexistence in phytoplankton through the genomic lens: Supplementary Material

scholarly article published 7 January 2019

Lista de obras de Stephane Rombauts

'Nebbiolo' genome assembly allows surveying the occurrence and functional implications of genomic structural variations in grapevines (Vitis vinifera L.).

A Gibbs sampling method to detect overrepresented motifs in the upstream regions of coexpressed genes.

A Snapshot of the Emerging Tomato Genome Sequence

A genomic analysis and transcriptomic atlas of gene expression in Psoroptes ovis reveals feeding- and stage-specific patterns of allergen expression

A link between host plant adaptation and pesticide resistance in the polyphagous spider mite Tetranychus urticae

A molecular timetable for apical bud formation and dormancy induction in poplar.

A new version of the grapevine reference genome assembly (12X.v2) and of its annotation (VCost.v3).

A symbiotic plant peroxidase involved in bacterial invasion of the tropical legume Sesbania rostrata. ⬇️

AFLPinSilico, simulating AFLP fingerprints

AGRONOMICS1: a new resource for Arabidopsis transcriptome profiling

Aging in legume symbiosis. A molecular view on nodule senescence in Medicago truncatula

An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies

Analysis of RNA-Seq data with TopHat and Cufflinks for genome-wide expression analysis of jasmonate-treated plants and plant cultures

Analysis of the Olive Fruit Fly Bactrocera oleae Transcriptome and Phylogenetic Classification of the Major Detoxification Gene Families

Annotation of a 95-kb Populus deltoides genomic sequence reveals a disease resistance gene cluster and novel class I and class II transposable elements

CLE peptides control Medicago truncatula nodulation locally and systemically.

Catalase deficiency drastically affects gene expression induced by high light in Arabidopsis thaliana

CathaCyc, a metabolic pathway database built from Catharanthus roseus RNA-Seq data

Characterization of two distinct DP-related genes from Arabidopsis thaliana

Comparative transcriptome analysis reveals common and specific tags for root hair and crack-entry invasion in Sesbania rostrata. ⬇️

Complex Evolutionary Dynamics of Massively Expanded Chemosensory Receptor Families in an Extreme Generalist Chelicerate Herbivore

Computational approaches to identify promoters and cis-regulatory elements in plant genomes

Dietary shifts have consequences for the repertoire of allergens produced by the European house dust mite.

Draft Genome Assembly of the False Spider Mite

Draft Genome Assembly of the Poultry Red Mite,

Draft Genome Assembly of the Sheep Scab Mite, Psoroptes ovis.

EST data suggest that poplar is an ancient polyploid

Erratum for Navia et al., "Draft Genome Assembly of the False Spider Mite Brevipalpus yothersi"

Flemish soils contain rhizobia partners for Northwestern Europe‐adapted soybean cultivars

Functional modules in the Arabidopsis core cell cycle binary protein-protein interaction network

Gene functionalities and genome structure in Bathycoccus prasinos reflect cellular specializations at the base of the green lineage

Gene prediction and gene classes in Arabidopsis thaliana

GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts

Genome Analyses of the Microalga Picochlorum Provide Insights into the Evolution of Thermotolerance in the Green Lineage

Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features

Genome-scale Arabidopsis promoter array identifies targets of the histone acetyltransferase GCN5.

Genome-wide analysis of core cell cycle genes in Arabidopsis

Genome-wide analysis of hydrogen peroxide-regulated gene expression in Arabidopsis reveals a high light-induced transcriptional cluster involved in anthocyanin biosynthesis

Genomewide structural annotation and evolutionary analysis of the type I MADS-box genes in plants

Genomic evidence that a sexually selected trait captures genome-wide variation and facilitates the purging of genetic load

Green Evolution and Dynamic Adaptations Revealed by Genomes of the Marine Picoeukaryotes Micromonas

How many genes are there in plants (... and why are they there)?

In silico cloning of genes encoding neuropeptides, neurohormones and their putative G-protein coupled receptors in a spider mite.

Legume genome evolution viewed through the Medicago truncatula and Lotus japonicus genomes

Microarray analysis of E2Fa-DPa-overexpressing plants uncovers a cross-talking genetic network between DNA replication and nitrogen assimilation

Moss transcriptome and beyond

OMSim: a simulator for optical map data.

Overview of tomato (Solanum lycopersicum) candidate pathogen recognition genes reveals important Solanum R locus dynamics.

Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp

Reannotation and extended community resources for the genome of the non-seed plant Physcomitrella patens provide insights into the evolution of plant gene structures and functions

Search for nodulation-related CLE genes in the genome of Glycine max.

Seven in absentia proteins affect plant growth and nodulation in Medicago truncatula.

Systematic analysis of cell-cycle gene expression during Arabidopsis development

Systematic localization of the Arabidopsis core cell cycle proteins reveals novel cell division complexes

The 'TranSeq' 3'-end sequencing method for high-throughput transcriptomics and gene space refinement in plant genomes

The Chara Genome: Secondary Complexity and Implications for Plant Terrestrialization

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

The Medicago genome provides insight into the evolution of rhizobial symbioses

The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants

The absence of the caffeine synthase gene is involved in the naturally decaffeinated status of Coffea humblotiana, a wild species from Comoro archipelago

The genome of the extremophile Artemia provides insight into strategies to cope with extreme environments

The metabolic blueprint of Phaeodactylum tricornutum reveals a eukaryotic Entner-Doudoroff glycolytic pathway

The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation

Transcriptome analysis during cell division in plants

Transcriptomic analysis of the poultry red mite, Dermanyssus gallinae, across all stages of the lifecycle

Virus-host coexistence in phytoplankton through the genomic lens: Supplementary Material