Lista de obras - Gerton Lunter - Dominio Público Uruguay

8.2% of the Human genome is constrained: variation in rates of turnover across functional element classes in the human lineage

artículo científico publicado en 2014

A "Long Indel" model for evolutionary sequence alignment

artículo científico publicado en 2003

A Phylogenetic Codon Substitution Model for Antibody Lineages

artículo científico publicado en 2017

A fine-scale chimpanzee genetic map from population sequencing

artículo científico publicado en 2012

A new isolation with migration model along complete genomes infers very different divergence processes among closely related great ape species

artículo científico publicado en 2012

A nucleotide substitution model with nearest-neighbour interactions

artículo científico publicado en 2004

A unified haplotype-based method for accurate and comprehensive variant calling

scientific article published on 29 March 2021

Accelerated evolution of the Prdm9 speciation gene across diverse metazoan taxa

artículo científico publicado en 2009

Accurate reconstruction of insertion-deletion histories by statistical phylogenetics

artículo científico publicado en 2012

An efficient algorithm for statistical multiple alignment on arbitrary phylogenetic trees

artículo científico publicado en 2003

An equivariant Bayesian convolutional network predicts recombination hotspots and accurately resolves binding motifs

artículo científico publicado en 2019

Analysis of B Cell Repertoire Dynamics Following Hepatitis B Vaccination in Humans, and Enrichment of Vaccine-specific Antibody Sequences

artículo científico publicado en 2015

B-cell repertoire dynamics after sequential hepatitis B vaccination and evidence for cross-reactive B-cell activation.

artículo científico publicado en 2016

BCR repertoire sequencing: different patterns of B-cell activation after two Meningococcal vaccines

artículo científico publicado en 2015

Bayesian coestimation of phylogeny and sequence alignment

artículo científico publicado en 2005

Benchmarking small-variant genotyping in polyploids

artículo científico publicado en 2021

CSN and CAVA: variant annotation tools for rapid, robust next-generation sequencing analysis in the clinical setting

artículo científico publicado en 2015

Comparative and demographic analysis of orang-utan genomes

artículo científico publicado en 2011

Demographic inference from multiple whole genomes using a particle filter for continuous Markov jump processes

artículo científico publicado en 2021

Dindel: accurate indel calls from short-read data

artículo científico publicado en 2010

Dog as an outgroup to human and mouse

artículo científico publicado en 2007

Efficient inference in state-space models through adaptive learning in online Monte Carlo expectation maximization

artículo científico publicado en 2019

Erratum to: B-cell repertoire dynamics after sequential hepatitis B vaccination and evidence for cross-reactive B-cell activation.

artículo científico publicado en 2016

Estimating Divergence Time and Ancestral Effective Population Size of Bornean and Sumatran Orangutan Subspecies Using a Coalescent Hidden Markov Model ⬇️

artículo científico publicado el 3 de marzo de 2011

Evolution of primate gene expression: drift and corrective sweeps?

artículo científico publicado en 2008

Evolutionary biology: human brain gene wins genome race

artículo científico publicado en 2006

Factors influencing success of clinical genome sequencing across a broad spectrum of disorders

artículo científico publicado en 2015

Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs

artículo científico publicado en 2007

GAT: a simulation framework for testing the association of genomic intervals

artículo científico publicado en 2013

Genome assembly quality: assessment and improvement using the neutral indel model

artículo científico publicado en 2010

Genome-wide functional element detection using pairwise statistical alignment outperforms multiple genome footprinting techniques

artículo científico publicado en 2010

Genome-wide identification of human functional DNA using a neutral indel model

artículo científico publicado en 2006

Genomic and transcriptional co-localization of protein-coding and long non-coding RNA pairs in the developing brain

artículo científico publicado en 2009

HMMoC--a compiler for hidden Markov models

artículo científico

Haplotype matching in large cohorts using the Li and Stephens model.

artículo científico publicado en 2019

Identification of antigen-specific B cell receptor sequences using public repertoire analysis

artículo científico publicado en 2014

Improved workflows for high throughput library preparation using the transposome-based Nextera system

artículo científico publicado en 2013

In-Depth Assessment of Within-Individual and Inter-Individual Variation in the B Cell Receptor Repertoire

artículo científico publicado en 2015

Insights into hominid evolution from the gorilla genome sequence

artículo científico publicado en 2012

Integrating mapping-, assembly- and haplotype-based approaches for calling variants in clinical sequencing applications

artículo científico publicado en 2014

Investigating selection on viruses: a statistical alignment approach

artículo científico publicado en 2008

Massive turnover of functional sequence in human and other mammalian genomes

artículo científico publicado en 2010

New Proofs and a Generalization of Inequalities of Fan, Taussky, and Todd

Novel type IV secretion system involved in propagation of genomic islands

artículo científico publicado en 2006

OpEx - a validated, automated pipeline optimised for clinical exome sequence analysis.

artículo científico publicado en 2016

Probabilistic whole-genome alignments reveal high indel rates in the human and mouse genomes

artículo científico publicado en 2007

Recessive mutations in SPTBN2 implicate β-III spectrin in both cognitive and motor development

artículo científico publicado en 2012

Sequencing of human genomes with nanopore technology

artículo científico publicado en 2019

Signatures of adaptive evolution within human non-coding sequence

artículo científico publicado en 2006

Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads

artículo científico publicado en 2011

The Diversity and Molecular Evolution of B-Cell Receptors during Infection

artículo científico publicado en 2016

The bonobo genome compared with the chimpanzee and human genomes

artículo científico publicado en 2012

The human pancreatic islet transcriptome: expression of candidate genes for type 1 diabetes and the impact of pro-inflammatory cytokines

artículo científico publicado en 2012

The origin, evolution, and functional impact of short insertion-deletion variants identified in 179 human genomes

artículo científico publicado en 2013

Uncertainty in homology inferences: assessing and improving genomic sequence alignment

artículo científico publicado en 2007

Unlocking the bottleneck in forward genetics using whole-genome sequencing and identity by descent to isolate causative mutations

artículo científico publicado en 2013

scrm: efficiently simulating long sequences using the approximated coalescent with recombination

artículo científico publicado en 2015

Lista de obras de Gerton Lunter

8.2% of the Human genome is constrained: variation in rates of turnover across functional element classes in the human lineage

A "Long Indel" model for evolutionary sequence alignment

A Phylogenetic Codon Substitution Model for Antibody Lineages

A fine-scale chimpanzee genetic map from population sequencing

A new isolation with migration model along complete genomes infers very different divergence processes among closely related great ape species

A nucleotide substitution model with nearest-neighbour interactions

A unified haplotype-based method for accurate and comprehensive variant calling

A unified haplotype-based method for accurate and comprehensive variant calling

Accelerated evolution of the Prdm9 speciation gene across diverse metazoan taxa

Accurate reconstruction of insertion-deletion histories by statistical phylogenetics

An efficient algorithm for statistical multiple alignment on arbitrary phylogenetic trees

An equivariant Bayesian convolutional network predicts recombination hotspots and accurately resolves binding motifs

Analysis of B Cell Repertoire Dynamics Following Hepatitis B Vaccination in Humans, and Enrichment of Vaccine-specific Antibody Sequences

B-cell repertoire dynamics after sequential hepatitis B vaccination and evidence for cross-reactive B-cell activation.

BCR repertoire sequencing: different patterns of B-cell activation after two Meningococcal vaccines

Bayesian coestimation of phylogeny and sequence alignment

Benchmarking small-variant genotyping in polyploids

CSN and CAVA: variant annotation tools for rapid, robust next-generation sequencing analysis in the clinical setting

Comparative and demographic analysis of orang-utan genomes

Demographic inference from multiple whole genomes using a particle filter for continuous Markov jump processes

Dindel: accurate indel calls from short-read data

Dog as an outgroup to human and mouse

Efficient inference in state-space models through adaptive learning in online Monte Carlo expectation maximization

Erratum to: B-cell repertoire dynamics after sequential hepatitis B vaccination and evidence for cross-reactive B-cell activation.

Estimating Divergence Time and Ancestral Effective Population Size of Bornean and Sumatran Orangutan Subspecies Using a Coalescent Hidden Markov Model ⬇️

Evolution of primate gene expression: drift and corrective sweeps?

Evolutionary biology: human brain gene wins genome race

Factors influencing success of clinical genome sequencing across a broad spectrum of disorders

Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs

GAT: a simulation framework for testing the association of genomic intervals

Genome assembly quality: assessment and improvement using the neutral indel model

Genome-wide functional element detection using pairwise statistical alignment outperforms multiple genome footprinting techniques

Genome-wide identification of human functional DNA using a neutral indel model

Genomic and transcriptional co-localization of protein-coding and long non-coding RNA pairs in the developing brain

HMMoC--a compiler for hidden Markov models

Haplotype matching in large cohorts using the Li and Stephens model.

Identification of antigen-specific B cell receptor sequences using public repertoire analysis

Improved workflows for high throughput library preparation using the transposome-based Nextera system

In-Depth Assessment of Within-Individual and Inter-Individual Variation in the B Cell Receptor Repertoire

Insights into hominid evolution from the gorilla genome sequence

Integrating mapping-, assembly- and haplotype-based approaches for calling variants in clinical sequencing applications

Investigating selection on viruses: a statistical alignment approach

Massive turnover of functional sequence in human and other mammalian genomes

New Proofs and a Generalization of Inequalities of Fan, Taussky, and Todd

Novel type IV secretion system involved in propagation of genomic islands

OpEx - a validated, automated pipeline optimised for clinical exome sequence analysis.

Probabilistic whole-genome alignments reveal high indel rates in the human and mouse genomes

Recessive mutations in SPTBN2 implicate β-III spectrin in both cognitive and motor development

Sequencing of human genomes with nanopore technology

Signatures of adaptive evolution within human non-coding sequence

Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence reads

The Diversity and Molecular Evolution of B-Cell Receptors during Infection

The bonobo genome compared with the chimpanzee and human genomes

The human pancreatic islet transcriptome: expression of candidate genes for type 1 diabetes and the impact of pro-inflammatory cytokines

The origin, evolution, and functional impact of short insertion-deletion variants identified in 179 human genomes

Uncertainty in homology inferences: assessing and improving genomic sequence alignment

Unlocking the bottleneck in forward genetics using whole-genome sequencing and identity by descent to isolate causative mutations

scrm: efficiently simulating long sequences using the approximated coalescent with recombination