Lista de obras - Paolo Marcatili - Dominio Público Uruguay

A database of immunoglobulins with integrated tools: DIGIT

artículo científico publicado en 2012

A novel approach to probe host-pathogen interactions of bovine digital dermatitis, a model of a complex polymicrobial infection

artículo científico publicado en 2016

AnOxPePred: using deep learning for the prediction of antioxidative properties of peptides

scientific article published on 08 December 2020

Antibody Specific B-Cell Epitope Predictions: Leveraging Information From Antibody-Antigen Protein Complexes

artículo científico publicado en 2019

Antibody informatics for drug discovery

artículo científico publicado en 2014

Antibody modeling using the prediction of immunoglobulin structure (PIGS) web server [corrected].

artículo científico publicado en 2014

ArrayPitope: Automated Analysis of Amino Acid Substitutions for Peptide Microarray-Based Antibody Epitope Mapping

artículo científico publicado en 2017

Automated shape-based clustering of 3D immunoglobulin protein structures in chronic lymphocytic leukemia

scientific article published on 20 November 2018

Benchmark datasets of immune receptor-epitope structural complexes

artículo científico publicado en 2019

BepiPred-2.0: improving sequence-based B-cell epitope prediction using conformational epitopes

artículo científico publicado en 2017

Biofunctionality of Enzymatically Derived Peptides from Codfish (<i>Gadus morhua</i>) Frame: Bulk In Vitro Properties, Quantitative Proteomics, and Bioinformatic Prediction

scientific article published on 27 November 2020

Data mining patented antibody sequences

publication published on 01 January 2021

Effects of natural selection and gene conversion on the evolution of human glycophorins coding for MNS blood polymorphisms in malaria-endemic African populations

artículo científico publicado en 2011

Epitope Specific Antibodies and T Cell Receptors in the Immune Epitope Database

artículo científico publicado en 2018

Erratum: antibody modeling using the Prediction of ImmunoGlobulin Structure (PIGS) web server

artículo científico publicado en 2015

Exploiting homology information in nontemplate based prediction of protein structures.

artículo científico publicado en 2015

FunClust: a web server for the identification of structural motifs in a set of non-homologous protein structures

artículo científico publicado en 2008

Human MHC-II with Shared Epitope Motifs Are Optimal Epstein-Barr Virus Glycoprotein 42 Ligands-Relation to Rheumatoid Arthritis.

artículo científico publicado en 2018

IEDB-AR: immune epitope database-analysis resource in 2019

artículo científico publicado en 2019

Identification of emulsifier potato peptides by bioinformatics: application to omega-3 delivery emulsions and release from potato industry side streams

scientific article published on 20 January 2020

Identification of new autoantigens by protein array indicates a role for IL4 neutralization in autoimmune hepatitis

artículo científico publicado en 2012

Identification of the cognate peptide-MHC target of T cell receptors using molecular modeling and force field scoring

artículo científico publicado en 2017

Igs expressed by chronic lymphocytic leukemia B cells show limited binding-site structure variability.

artículo científico publicado en 2013

Immunoglobulin G structure and rheumatoid factor epitopes

scientific article published on 14 June 2019

Improved methods for predicting peptide binding affinity to MHC class II molecules

artículo científico publicado en 2018

Improving the accuracy of the structure prediction of the third hypervariable loop of the heavy chains of antibodies

artículo científico publicado en 2014

LYRA, a webserver for lymphocyte receptor structural modeling

artículo científico publicado en 2015

MAISTAS: a tool for automatic structural evaluation of alternative splicing products

artículo científico publicado en 2011

Maximum-Entropy Models of Sequenced Immune Repertoires Predict Antigen-Antibody Affinity

artículo científico publicado en 2016

Modeled Structure of the Cell Envelope Proteinase of <i>Lactococcus lactis</i>

artículo científico publicado en 2020

Mutation pattern of paired immunoglobulin heavy and light variable domains in chronic lymphocytic leukemia B cells

artículo científico publicado en 2011

NetMHCpan 4.0: Improved peptide-MHC class I interaction predictions integrating eluted ligand and peptide binding affinity data

article published in 2017

NetMHCpan-4.0: Improved Peptide-MHC Class I Interaction Predictions Integrating Eluted Ligand and Peptide Binding Affinity Data

artículo científico publicado en 2017

NetSurfP-2.0: Improved prediction of protein structural features by integrated deep learning

artículo científico publicado en 2019

On the mechanism of chloroquine resistance in Plasmodium falciparum

artículo científico publicado en 2010

PICMI: mapping point mutations on genomes

artículo científico publicado en 2010

PIGS: automatic prediction of antibody structures

artículo científico publicado en 2008

Positive diversifying selection is a pervasive adaptive force throughout the Drosophila radiation.

artículo científico publicado en 2017

Prediction of Antibody Epitopes

artículo científico publicado en 2015

Prediction of site-specific interactions in antibody-antigen complexes: the proABC method and server

artículo científico publicado en 2013

Selection and Modelling of a New Single-Domain Intrabody Against TDP-43

artículo científico publicado en 2021

Stereotyped patterns of B-cell receptor in splenic marginal zone lymphoma

artículo científico publicado en 2010

Structural Characterization of Peptide Antibodies

artículo científico publicado en 2015

Structural repertoire of immunoglobulin λ light chains

artículo científico publicado en 2011

T Cell Epitope Prediction and Its Application to Immunotherapy

publication published on 15 September 2021

T cell receptor fingerprinting enables in-depth characterization of the interactions governing recognition of peptide-MHC complexes

scientific article published on 19 November 2018

T cell receptor sequence clustering and antigen specificity

scientific article published on 05 August 2020

T-Cell Receptor Cognate Target Prediction Based on Paired α and β Chain Sequence and Structural CDR Loop Similarities

scientific article published on 28 August 2019

TCRpMHCmodels: Structural modelling of TCR-pMHC class I complexes

artículo científico publicado en 2019

Tabhu: tools for antibody humanization

artículo científico publicado en 2015

Terminal deoxynucleotidyl transferase-mediated formation of protein binding polynucleotides

artículo científico publicado en 2021

The ABCD database: a repository for chemically defined antibodies

scientific article published on 01 January 2020

The MoVIN server for the analysis of protein interaction networks

artículo científico publicado en 2008

The association of heavy and light chain variable domains in antibodies: implications for antigen specificity

artículo científico publicado en 2011

The structure, viscoelasticity and charge of potato peptides adsorbed at the oil-water interface determine the physicochemical stability of fish oil-in-water emulsions

artículo científico publicado en 2021

Lista de obras de Paolo Marcatili

A database of immunoglobulins with integrated tools: DIGIT

A novel approach to probe host-pathogen interactions of bovine digital dermatitis, a model of a complex polymicrobial infection

AnOxPePred: using deep learning for the prediction of antioxidative properties of peptides

Antibody Specific B-Cell Epitope Predictions: Leveraging Information From Antibody-Antigen Protein Complexes

Antibody informatics for drug discovery

Antibody modeling using the prediction of immunoglobulin structure (PIGS) web server [corrected].

ArrayPitope: Automated Analysis of Amino Acid Substitutions for Peptide Microarray-Based Antibody Epitope Mapping

Automated shape-based clustering of 3D immunoglobulin protein structures in chronic lymphocytic leukemia

Benchmark datasets of immune receptor-epitope structural complexes

BepiPred-2.0: improving sequence-based B-cell epitope prediction using conformational epitopes

Biofunctionality of Enzymatically Derived Peptides from Codfish (<i>Gadus morhua</i>) Frame: Bulk In Vitro Properties, Quantitative Proteomics, and Bioinformatic Prediction

Data mining patented antibody sequences

Effects of natural selection and gene conversion on the evolution of human glycophorins coding for MNS blood polymorphisms in malaria-endemic African populations

Epitope Specific Antibodies and T Cell Receptors in the Immune Epitope Database

Erratum: antibody modeling using the Prediction of ImmunoGlobulin Structure (PIGS) web server

Exploiting homology information in nontemplate based prediction of protein structures.

FunClust: a web server for the identification of structural motifs in a set of non-homologous protein structures

Human MHC-II with Shared Epitope Motifs Are Optimal Epstein-Barr Virus Glycoprotein 42 Ligands-Relation to Rheumatoid Arthritis.

IEDB-AR: immune epitope database-analysis resource in 2019

Identification of emulsifier potato peptides by bioinformatics: application to omega-3 delivery emulsions and release from potato industry side streams

Identification of new autoantigens by protein array indicates a role for IL4 neutralization in autoimmune hepatitis

Identification of the cognate peptide-MHC target of T cell receptors using molecular modeling and force field scoring

Igs expressed by chronic lymphocytic leukemia B cells show limited binding-site structure variability.

Immunoglobulin G structure and rheumatoid factor epitopes

Improved methods for predicting peptide binding affinity to MHC class II molecules

Improving the accuracy of the structure prediction of the third hypervariable loop of the heavy chains of antibodies

LYRA, a webserver for lymphocyte receptor structural modeling

MAISTAS: a tool for automatic structural evaluation of alternative splicing products

Maximum-Entropy Models of Sequenced Immune Repertoires Predict Antigen-Antibody Affinity

Modeled Structure of the Cell Envelope Proteinase of <i>Lactococcus lactis</i>

Mutation pattern of paired immunoglobulin heavy and light variable domains in chronic lymphocytic leukemia B cells

NetMHCpan 4.0: Improved peptide-MHC class I interaction predictions integrating eluted ligand and peptide binding affinity data

NetMHCpan-4.0: Improved Peptide-MHC Class I Interaction Predictions Integrating Eluted Ligand and Peptide Binding Affinity Data

NetSurfP-2.0: Improved prediction of protein structural features by integrated deep learning

On the mechanism of chloroquine resistance in Plasmodium falciparum

PICMI: mapping point mutations on genomes

PIGS: automatic prediction of antibody structures

Positive diversifying selection is a pervasive adaptive force throughout the Drosophila radiation.

Prediction of Antibody Epitopes

Prediction of site-specific interactions in antibody-antigen complexes: the proABC method and server

Selection and Modelling of a New Single-Domain Intrabody Against TDP-43

Stereotyped patterns of B-cell receptor in splenic marginal zone lymphoma

Structural Characterization of Peptide Antibodies

Structural repertoire of immunoglobulin λ light chains

T Cell Epitope Prediction and Its Application to Immunotherapy

T cell receptor fingerprinting enables in-depth characterization of the interactions governing recognition of peptide-MHC complexes

T cell receptor sequence clustering and antigen specificity

T-Cell Receptor Cognate Target Prediction Based on Paired α and β Chain Sequence and Structural CDR Loop Similarities

TCRpMHCmodels: Structural modelling of TCR-pMHC class I complexes

Tabhu: tools for antibody humanization

Terminal deoxynucleotidyl transferase-mediated formation of protein binding polynucleotides

The ABCD database: a repository for chemically defined antibodies

The MoVIN server for the analysis of protein interaction networks

The association of heavy and light chain variable domains in antibodies: implications for antigen specificity

The structure, viscoelasticity and charge of potato peptides adsorbed at the oil-water interface determine the physicochemical stability of fish oil-in-water emulsions