Lista de obras - Pjotr Prins - Dominio Público Uruguay

A draft human pangenome reference

scientific article published on 10 May 2023

A genome-wide genetic map of NB-LRR disease resistance loci in potato

artículo científico publicado en 2011

A secreted SPRY domain-containing protein (SPRYSEC) from the plant-parasitic nematode Globodera rostochiensis interacts with a CC-NB-LRR protein from a susceptible tomato

artículo científico publicado en 2009

A spectrum of free software tools for processing the VCF variant call format: vcflib, bio-vcf, cyvcf2, hts-nim and slivar

artículo científico publicado en 2022

An Integrated Systems Genetics and Omics Toolkit to Probe Gene Function

artículo científico publicado en 2017

Big data, but are we ready?

article by Oswaldo Trelles et al published 8 February 2011 in Nature Reviews Genetics

BioHackathon 2015: Semantics of data for life sciences and reproducible research

artículo científico publicado en 2020

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains

artículo científico publicado en 2014

BioRuby: bioinformatics software for the Ruby programming language

artículo científico publicado en 2010

Biogem: an effective tool-based approach for scaling up open source software development in bioinformatics

artículo científico publicado en 2012

Bioinformatics tools and database resources for systems genetics analysis in mice--a short review and an evaluation of future needs

artículo científico publicado en 2012

CiTO support for BioHackrXiv

Community-driven development for computational biology at Sprints, Hackathons and Codefests

artículo científico publicado en 2014

Correlation Trait Loci (CTL) mapping: phenotype network inference subject to genotype

Evaluating the performance of tools used to call minority variants from whole genome short-read data

Fast probabilistic file fingerprinting for big data

artículo científico publicado en 2013

GeneCup: mining PubMed and GWAS catalog for gene-keyword relationships

artículo científico publicado en 2022

GeneNetwork: A Toolbox for Systems Genetics

artículo científico publicado en 2017

GeneNetwork: framework for web-based genetics

article

Genetic Contribution to Initial and Progressive Alcohol Intake Among Recombinant Inbred Strains of Mice

artículo científico publicado en 2018

Genetical genomics for evolutionary studies

artículo científico publicado en 2012

Giving software its due through community-driven review and publication

High-throughput Molecular Docking Now in Reach for a Wider Biochemical Community

Highlights from the Era of Open Source Web-Based Tools

artículo científico publicado en 2021

Identification of imprinted genes subject to parent-of-origin specific expression in Arabidopsis thaliana seeds

artículo científico publicado en 2011

Integration of evidence across human and model organism studies: A meeting report

artículo científico publicado en 2021

Journal of Open Source Software (JOSS): design and first-year review

artículo científico publicado en 2018

Linking cDNA-AFLP-based gene expression patterns and ESTs

artículo científico publicado en 2006

Mapping Determinants of Gene Expression Plasticity by Genetical Genomics in C. elegans

article

Mapping determinants of gene expression plasticity by genetical genomics in C. elegans

artículo científico publicado en 2006

Metadata for BioHackrXiv Markdown publications

Metadata handling for BioHackathon publications through BioHackrXiv

R/qtl2: Software for Mapping Quantitative Trait Loci with High-Dimensional Data and Multiparent Populations

article

R/qtl2: software for mapping quantitative trait loci with high dimensional data and multi-parent populations

R/qtl: high-throughput multiple QTL mapping

artículo científico publicado en 2010

Robust Cross-Platform Workflows: How Technical and Scientific Communities Collaborate to Develop, Test and Share Best Practices for Data Analysis

Sambamba: fast processing of NGS alignment formats.

artículo científico publicado en 2015

Scalable Workflows and Reproducible Data Analysis for Genomics

scientific article published on 01 January 2019

Scalable computing for evolutionary genomics

artículo científico publicado en 2012

Sharing Programming Resources Between Bio* Projects

scientific article published on 01 January 2019

Sharing programming resources between Bio* projects through remote procedure call and native call stack strategies

artículo científico publicado en 2012

Speeding up eQTL scans in the BXD population using GPUs

scientific article published on 16 August 2021

Systems Genetics for Evolutionary Studies

scientific article published on 01 January 2019

Ten simple rules to run a successful BioHackathon

artículo científico publicado en 2020

The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies

artículo científico publicado en 2013

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. The DBCLS BioHackathon Consortium*

artículo científico publicado en 2010

The molecular genetic make-up of male breast cancer

artículo científico publicado en 2019

Tissue-specific mutation accumulation in human adult stem cells during life

artículo científico publicado en 2016

Toward effective software solutions for big biology

artículo científico publicado en 2015

Transcriptional and Linkage Analyses Identify Loci that Mediate the Differential Macrophage Response to Inflammatory Stimuli and Infection

artículo científico publicado en 2015

xQTL workbench: a scalable web environment for multi-level QTL analysis

artículo científico publicado en 2012

Lista de obras de Pjotr Prins

A draft human pangenome reference

A genome-wide genetic map of NB-LRR disease resistance loci in potato

A secreted SPRY domain-containing protein (SPRYSEC) from the plant-parasitic nematode Globodera rostochiensis interacts with a CC-NB-LRR protein from a susceptible tomato

A spectrum of free software tools for processing the VCF variant call format: vcflib, bio-vcf, cyvcf2, hts-nim and slivar

An Integrated Systems Genetics and Omics Toolkit to Probe Gene Function

Big data, but are we ready?

BioHackathon 2015: Semantics of data for life sciences and reproducible research

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains

BioRuby: bioinformatics software for the Ruby programming language

Biogem: an effective tool-based approach for scaling up open source software development in bioinformatics

Bioinformatics tools and database resources for systems genetics analysis in mice--a short review and an evaluation of future needs

CiTO support for BioHackrXiv

Community-driven development for computational biology at Sprints, Hackathons and Codefests

Correlation Trait Loci (CTL) mapping: phenotype network inference subject to genotype

Evaluating the performance of tools used to call minority variants from whole genome short-read data

Evaluating the performance of tools used to call minority variants from whole genome short-read data

Fast probabilistic file fingerprinting for big data

GeneCup: mining PubMed and GWAS catalog for gene-keyword relationships

GeneNetwork: A Toolbox for Systems Genetics

GeneNetwork: framework for web-based genetics

Genetic Contribution to Initial and Progressive Alcohol Intake Among Recombinant Inbred Strains of Mice

Genetical genomics for evolutionary studies

Giving software its due through community-driven review and publication

High-throughput Molecular Docking Now in Reach for a Wider Biochemical Community

Highlights from the Era of Open Source Web-Based Tools

Identification of imprinted genes subject to parent-of-origin specific expression in Arabidopsis thaliana seeds

Integration of evidence across human and model organism studies: A meeting report

Journal of Open Source Software (JOSS): design and first-year review

Linking cDNA-AFLP-based gene expression patterns and ESTs

Mapping Determinants of Gene Expression Plasticity by Genetical Genomics in C. elegans

Mapping determinants of gene expression plasticity by genetical genomics in C. elegans

Metadata for BioHackrXiv Markdown publications

Metadata handling for BioHackathon publications through BioHackrXiv

R/qtl2: Software for Mapping Quantitative Trait Loci with High-Dimensional Data and Multiparent Populations

R/qtl2: software for mapping quantitative trait loci with high dimensional data and multi-parent populations

R/qtl: high-throughput multiple QTL mapping

Robust Cross-Platform Workflows: How Technical and Scientific Communities Collaborate to Develop, Test and Share Best Practices for Data Analysis

Sambamba: fast processing of NGS alignment formats.

Scalable Workflows and Reproducible Data Analysis for Genomics

Scalable computing for evolutionary genomics

Sharing Programming Resources Between Bio* Projects

Sharing programming resources between Bio* projects through remote procedure call and native call stack strategies

Speeding up eQTL scans in the BXD population using GPUs

Systems Genetics for Evolutionary Studies

Ten simple rules to run a successful BioHackathon

The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. The DBCLS BioHackathon Consortium*

The molecular genetic make-up of male breast cancer

Tissue-specific mutation accumulation in human adult stem cells during life

Toward effective software solutions for big biology

Transcriptional and Linkage Analyses Identify Loci that Mediate the Differential Macrophage Response to Inflammatory Stimuli and Infection

xQTL workbench: a scalable web environment for multi-level QTL analysis