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Lista de obras de Tomas Marques-Bonet

<i>Salmonella enterica</i> from a soldier from the 1652 siege of Barcelona (Spain) supports historical transatlantic epidemic contacts

artículo científico publicado en 2021

A 3-way hybrid approach to generate a new high-quality chimpanzee reference genome (Pan_tro_3.0).

artículo científico publicado en 2017

A Common Genetic Origin for Early Farmers from Mediterranean Cardial and Central European LBK Cultures ⬇️

artículo científico publicado en 2015

A Draft Sequence of the Neandertal Genome

artículo científico publicado en 2010

A burst of segmental duplications in the genome of the African great ape ancestor

artículo científico publicado en 2009

A comparison of gene expression and DNA methylation patterns across tissues and species

artículo científico publicado en 2020

A genomic exploration of the early evolution of extant cats and their sabre-toothed relatives

artículo científico publicado en 2021

A global catalog of whole-genome diversity from 233 primate species

A large and complex structural polymorphism at 16p12.1 underlies microdeletion disease risk

artículo científico publicado en 2010

A panel of induced pluripotent stem cells from chimpanzees: a resource for comparative functional genomics.

artículo científico publicado en 2015

A roadmap for high-throughput sequencing studies of wild animal populations using noninvasive samples and hybridization capture

scientific article published on 01 May 2019

Accelerated exon evolution within primate segmental duplications.

scientific article published on 29 January 2013

Admixture in Mammals and How to Understand Its Functional Implications: On the Abundance of Gene Flow in Mammalian Species, Its Impact on the Genome, and Roads into a Functional Understanding

artículo científico publicado en 2019

An evolutionary medicine perspective on Neandertal extinction

artículo científico publicado en 2017

Analysis of somatic mutations in 131 human brains reveals aging-associated hypermutability

artículo científico publicado en 2022

Analysis of structural diversity in wolf-like canids reveals post-domestication variants

artículo científico publicado en 2014

Ancestral reconstruction of segmental duplications reveals punctuated cores of human genome evolution

artículo científico publicado en 2007

Ancient admixture from an extinct ape lineage into bonobos

scientific article published on 29 April 2019

Ancient and modern genomes unravel the evolutionary history of the rhinoceros family

artículo científico publicado en 2021

Ancient gene flow from early modern humans into Eastern Neanderthals

artículo científico publicado en 2016

Ancient genomic changes associated with domestication of the horse

artículo científico publicado en 2017

Annotated features of domestic cat - Felis catus genome

artículo científico publicado en 2014

Arctic-adapted dogs emerged at the Pleistocene-Holocene transition

artículo científico publicado en 2020

Association Cluster Detector: a tool for heuristic detection of significance clusters in whole-genome scans.

artículo científico publicado en 2005

Author Correction: Ancient admixture from an extinct ape lineage into bonobos

scientific article published on 01 June 2019

Author Correction: Comparative and demographic analysis of orang-utan genomes

artículo científico publicado en 2022

Author Correction: Direct estimation of mutations in great apes reconciles phylogenetic dating

scientific article published on 01 May 2019

Author Correction: Elephant shark genome provides unique insights into gnathostome evolution

artículo científico publicado en 2020

Author Correction: Potential damaging mutation in LRP5 from genome sequencing of the first reported chimpanzee with the Chiari malformation.

artículo científico publicado en 2018

Author Correction: The dental proteome of Homo antecessor

artículo científico publicado en 2020

Bottlenecks and selective sweeps during domestication have increased deleterious genetic variation in dogs

artículo científico publicado en 2015

Branching out: what omics can tell us about primate evolution

artículo científico publicado en 2020

Characterization of nuclear mitochondrial insertions in the whole genomes of primates

artículo científico publicado en 2020

Characterization of six human disease-associated inversion polymorphisms

artículo científico publicado en 2009

Chimpanzee genomic diversity reveals ancient admixture with bonobos

artículo científico publicado en 2016

Chromosomal rearrangements and the genomic distribution of gene-expression divergence in humans and chimpanzees

artículo científico publicado en 2004

Chromosomal rearrangements are associated with higher rates of molecular evolution in mammals

article

Clonal polymorphism and high heterozygosity in the celibate genome of the Amazon molly

artículo científico publicado en 2018

Comparative analysis of the domestic cat genome reveals genetic signatures underlying feline biology and domestication

artículo científico publicado en 2014

Comparative and demographic analysis of orang-utan genomes

artículo científico publicado en 2011

Comparative genomics of Balto, a famous historic dog, captures lost diversity of 1920s sled dogs ⬇️

Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing

artículo científico publicado en 2017

Copy number variants and fixed duplications among 198 rhesus macaques (Macaca mulatta)

scientific article published on 11 May 2020

Copy number variation analysis in the great apes reveals species-specific patterns of structural variation

artículo científico publicado en 2011

Copy number variation and evolution in humans and chimpanzees

artículo científico publicado en 2008

Copy number variation underlies complex phenotypes in domestic dog breeds and other canids

artículo científico publicado en 2021

Corrigendum: The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2.

artículo científico publicado en 2017

Current advances in primate genomics: novel approaches for understanding evolution and disease

scientific article published in 2023

DNA Methylation: Insights into Human Evolution

artículo científico publicado en 2015

DNA methylation contributes to natural human variation

artículo científico publicado en 2013

Death and resurrection of the human IRGM gene

artículo científico publicado en 2009

Demographic History of the Genus Pan Inferred from Whole Mitochondrial Genome Reconstructions

artículo científico publicado en 2016

Demographically-Based Evaluation of Genomic Regions under Selection in Domestic Dogs

artículo científico publicado en 2016

Derived immune and ancestral pigmentation alleles in a 7,000-year-old Mesolithic European

artículo científico publicado en 2014

Differential DNA methylation of vocal and facial anatomy genes in modern humans

artículo científico publicado en 2020

Differential Gene Expression in the Human Brain Is Associated with Conserved, but Not Accelerated, Noncoding Sequences

artículo científico publicado en 2017

Direct estimation of mutations in great apes reconciles phylogenetic dating

artículo científico publicado en 2019

Direct estimation of mutations in great apes reveals significant recent human slowdown in the yearly mutation rate

Divergent sensory and immune gene evolution in sea turtles with contrasting demographic and life histories

artículo científico publicado en 2023

Dynamics of DNA methylation in recent human and great ape evolution

artículo científico publicado en 2013

Elephant shark genome provides unique insights into gnathostome evolution

artículo científico publicado en 2014

Enamel proteome shows that Gigantopithecus was an early diverging pongine

scientific article published on 13 November 2019

Erratum to: Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing

scholarly article published in GigaScience

Erratum: A burst of segmental duplications in the genome of the African great ape ancestor

artículo científico publicado en 2009

Erratum: Corrigendum: Elephant shark genome provides unique insights into gnathostome evolution

artículo científico publicado en 2014

Evolution and demography of the great apes.

artículo científico publicado en 2016

Evolution and diversity of copy number variation in the great ape lineage

artículo científico publicado en 2013

Evolutionary Genomics and Conservation of the Endangered Przewalski's Horse

artículo científico publicado en 2015

Evolutionary constraint and innovation across hundreds of placental mammals

artículo científico publicado en 2023

Evolutionary dynamism of the primate LRRC37 gene family

artículo científico publicado en 2012

Examining phylogenetic relationships among gibbon genera using whole genome sequence data using an approximate bayesian computation approach

artículo científico publicado en 2015

Extensive Regulatory Changes in Genes Affecting Vocal and Facial Anatomy Separate Modern from Archaic Humans

article

Extreme differences between human germline and tumor mutation densities are driven by ancestral human-specific deviations

artículo científico publicado en 2020

Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx

artículo científico publicado en 2016

FOXP2 variation in great ape populations offers insight into the evolution of communication skills

artículo científico publicado en 2017

Frequent appearance of novel protein-coding sequences by frameshift translation

artículo científico publicado en 2006

Functional Implications of Human-Specific Changes in Great Ape microRNAs

artículo científico publicado en 2016

Gene Fusions Derived by Transcriptional Readthrough are Driven by Segmental Duplication in Human

scientific article published on 01 September 2019

Genetic Variation in Pan Species Is Shaped by Demographic History and Harbors Lineage-Specific Functions

artículo científico publicado en 2019

Genetic data from the extinct giant rat from Tenerife (Canary Islands) points to a recent divergence from mainland relatives

artículo científico publicado en 2021

Genetic history of an archaic hominin group from Denisova Cave in Siberia

artículo científico publicado en 2010

Genetic variation in Pan species is shaped by demographic history and underlies lineage-specific functions

Genome sequencing highlights the dynamic early history of dogs

artículo científico publicado en 2014

Genomes reveal marked differences in the adaptive evolution between orangutan species

Genomic Adaptations and Evolutionary History of the Extinct Scimitar-Toothed Cat, Homotherium latidens

artículo científico publicado en 2020

Genomic analysis of the blood attributed to Louis XVI (1754-1793), king of France

artículo científico publicado en 2014

Genomic legacy of the African cheetah, Acinonyx jubatus

artículo científico publicado en 2015

Genomics reveals introgression and purging of deleterious mutations in the Arabian leopard ( Panthera pardus nimr )

Germline determinants of the somatic mutation landscape in 2,642 cancer genomes

article

Giant tortoise genomes provide insights into longevity and age-related disease

artículo científico publicado en 2018

Gibbon genome and the fast karyotype evolution of small apes

artículo científico publicado en 2014

Gorilla genome structural variation reveals evolutionary parallelisms with chimpanzee

artículo científico publicado en 2011

Great ape genetic diversity and population history

artículo científico publicado en 2013

Historical Genomes Reveal the Genomic Consequences of Recent Population Decline in Eastern Gorillas

artículo científico publicado en 2019

How genomics can help biodiversity conservation

Human Oocyte-Derived Methylation Differences Persist in the Placenta Revealing Widespread Transient Imprinting.

artículo científico publicado en 2016

Human pseudogenes of the ABO family show a complex evolutionary dynamics and loss of function

artículo científico publicado en 2009

Illuminating the function of the orphan transporter, SLC22A10, in humans and other primates

artículo científico publicado en 2024

Inference of natural selection from ancient DNA

artículo científico publicado en 2020

Insights from the rescue and breeding management of Cuvier's gazelle (<i>Gazella cuvieri</i>) through whole-genome sequencing

artículo científico publicado en 2022

Insights into hominid evolution from the gorilla genome sequence

artículo científico publicado en 2012

Insights into mammalian TE diversity through the curation of 248 genome assemblies ⬇️

Integrating gene annotation with orthology inference at scale ⬇️

artículo científico publicado en 2023

Interrogating 11 Fast-Evolving Genes for Signatures of Recent Positive Selection in Worldwide Human Populations

article

Interspecific Gene Flow Shaped the Evolution of the Genus Canis

article

Interspecific Gene Flow Shaped the Evolution of the Genus Canis

artículo científico publicado en 2019

Late-replicating CNVs as a source of new genes

scientific article published on 15 December 2013

Late-replicating CNVs as a source of new genes.

artículo científico publicado en 2014

Limiting replication stress during somatic cell reprogramming reduces genomic instability in induced pluripotent stem cells

artículo científico publicado en 2015

Lineage-specific evolution of the vertebrate Otopetrin gene family revealed by comparative genomic analyses

artículo científico publicado en 2011

MHC class I diversity in chimpanzees and bonobos

artículo científico publicado en 2017

Maximizing the acquisition of unique reads in non-invasive capture sequencing experiments

scientific article published on 20 November 2020

Molecular and cellular reorganization of neural circuits in the human lineage.

artículo científico publicado en 2017

Molecular dating of caprines using ancient DNA sequences of Myotragus balearicus, an extinct endemic Balearic mammal

artículo científico publicado en 2005

Morphometric, Behavioral, and Genomic Evidence for a New Orangutan Species

erratum

Morphometric, Behavioral, and Genomic Evidence for a New Orangutan Species.

artículo científico publicado en 2017

Mountain gorilla genomes reveal the impact of long-term population decline and inbreeding

artículo científico publicado en 2015

Multiple Genomic Events Altering Hominin SIGLEC Biology and Innate Immunity Predated the Common Ancestor of Humans and Archaic Hominins

scientific article published on 18 June 2020

Murine segmental duplications are hot spots for chromosome and gene evolution

article

Natural Selection in the Great Apes

artículo científico publicado en 2016

On the association between chromosomal rearrangements and genic evolution in humans and chimpanzees

artículo científico publicado en 2007

On the path to extinction: Inbreeding and admixture in a declining grey wolf population

artículo científico publicado en 2018

Origins of De Novo Genes in Human and Chimpanzee

artículo científico publicado en 2015

Patterns and rates of intron divergence between humans and chimpanzees

artículo científico publicado en 2007

Personalized copy number and segmental duplication maps using next-generation sequencing.

artículo científico publicado en 2009

Population dynamics and genetic connectivity in recent chimpanzee history

artículo científico publicado en 2022

Potential damaging mutation in LRP5 from genome sequencing of the first reported chimpanzee with the Chiari malformation

artículo científico publicado en 2017

Prehistoric genomes reveal the genetic foundation and cost of horse domestication

artículo científico publicado en 2014

Rates and patterns of great ape retrotransposition

artículo científico publicado en 2013

Real‐time genomics for One Health

artículo científico publicado en 2023

Reconstructing Denisovan Anatomy Using DNA Methylation Maps

artículo científico publicado en 2020

Reconstructing Denisovan Anatomy Using DNA Methylation Maps

scientific article published on 01 September 2019

Recovering the genomes hidden in museum wet collections

artículo científico publicado en 2022

Reference genomes for conservation

artículo científico publicado en 2022

Return to the Sea, Get Huge, Beat Cancer: An Analysis of Cetacean Genomes Including an Assembly for the Humpback Whale (Megaptera novaeangliae)

scientific article published on 01 August 2019

Schizophrenia-associated somatic copy-number variants from 12,834 cases reveal recurrent NRXN1 and ABCB11 disruptions

artículo científico publicado en 2023

Selection in the Introgressed Regions of the Chimpanzee Genome

artículo científico publicado en 2018

Selection upon genome architecture: conservation of functional neighborhoods with changing genes

artículo científico publicado en 2010

Selective single molecule sequencing and assembly of a human Y chromosome of African origin

Selective single molecule sequencing and assembly of a human Y chromosome of African origin

scientific article published in Nature Communications

Sequencing human-gibbon breakpoints of synteny reveals mosaic new insertions at rearrangement sites

artículo científico publicado en 2008

Sequencing primate genomes: what have we learned?

artículo científico publicado en 2009

Similar genomic proportions of copy number variation within gray wolves and modern dog breeds inferred from whole genome sequencing

artículo científico publicado en 2017

Somatic mosaicism reveals clonal distributions of neocortical development

artículo científico publicado en 2022

Somatic mutations in Parkinson disease are enriched in synaptic and neuronal processes

Spatiotemporal transcriptomic divergence across human and macaque brain development

artículo científico publicado en 2018

Stably expressed APOBEC3H forms a barrier for cross-species transmission of simian immunodeficiency virus of chimpanzee to humans.

artículo científico publicado en 2017

Standards recommendations for the Earth BioGenome Project

artículo científico publicado en 2022

Tandem repeat variation in human and great ape populations and its impact on gene expression divergence

artículo científico publicado en 2015

Targeted conservation genetics of the endangered chimpanzee

scientific article published on 28 April 2020

Temporal and spatial expression of CCN genes in zebrafish

artículo científico publicado en 2010

The Diversity of Primates: From Biomedicine to Conservation Genomics

scientific article published on 16 November 2020

The ELIXIR Human Copy Number Variations Community: building bioinformatics infrastructure for research

scientific article published on 13 October 2020

The Earth BioGenome Project 2020: Starting the clock

artículo científico publicado en 2022

The Genomic Footprints of the Fall and Recovery of the Crested Ibis

scientific article published on 10 January 2019

The Novel Evolution of the Sperm Whale Genome

artículo científico publicado en 2017

The bonobo genome compared with the chimpanzee and human genomes

artículo científico publicado en 2012

The comparative genomics and complex population history of baboons

artículo científico publicado en 2019

The contribution of historical processes to contemporary extinction risk in placental mammals ⬇️

The dental proteome of Homo antecessor

scientific article published on 01 April 2020

The evolution of African great ape subtelomeric heterochromatin and the fusion of human chromosome 2.

artículo científico publicado en 2012

The evolution of human segmental duplications and the core duplicon hypothesis

artículo científico publicado en 2009

The evolutionary history of extinct and living lions

scientific article published on 04 May 2020

The functional and evolutionary impacts of human-specific deletions in conserved elements ⬇️

The genetic impact of an Ebola outbreak on a wild gorilla population

artículo científico publicado en 2021

The genetics of microdeletion and microduplication syndromes: an update.

artículo científico publicado en 2014

The genome of melon (Cucumis melo L.).

artículo científico publicado en 2012

The genome of the vervet (Chlorocebus aethiops sabaeus)

artículo científico publicado en 2015

The genome sequencing of an albino Western lowland gorilla reveals inbreeding in the wild

artículo científico publicado en 2013

The genomic distribution of intraspecific and interspecific sequence divergence of human segmental duplications relative to human/chimpanzee chromosomal rearrangements

artículo científico publicado en 2008

The genomics of ecological flexibility, large brains, and long lives in capuchin monkeys revealed with fecalFACS

artículo científico publicado en 2021

The impact of endogenous content, replicates and pooling on genome capture from faecal samples

artículo científico publicado en 2017

The impact of genetic adaptation on chimpanzee subspecies differentiation

artículo científico publicado en 2019

The interplay between DNA methylation and sequence divergence in recent human evolution.

artículo científico publicado en 2015

The landscape of tolerated genetic variation in humans and primates

The origins and impact of primate segmental duplications

artículo científico publicado en 2009

The prion protein gene in humans revisited: lessons from a worldwide resequencing study

artículo científico publicado en 2005

The wolf reference genome sequence (Canis lupus lupus) and its implications for Canis spp. population genomics

artículo científico publicado en 2017

Three-dimensional genome rewiring in loci with human accelerated regions ⬇️

artículo científico publicado en 2023

Towards complete and error-free genome assemblies of all vertebrate species

artículo científico publicado en 2021

Tracking Five Millennia of Horse Management with Extensive Ancient Genome Time Series.

artículo científico publicado en 2019

Tracking the origins of Yakutian horses and the genetic basis for their fast adaptation to subarctic environments

artículo científico publicado en 2015

Variation in predicted COVID-19 risk among lemurs and lorises

artículo científico

Variation in predicted COVID-19 risk among lemurs and lorises

artículo científico

Whole genome sequencing in the search for genes associated with the control of SIV infection in the Mauritian macaque model

artículo científico publicado en 2018

Whole mitochondrial genomes illuminate ancient intercontinental dispersals of grey wolves (Canis lupus )

article

Whole-genome sequence analysis of a Pan African set of samples reveals archaic gene flow from an extinct basal population of modern humans into sub-Saharan populations

article

Worldwide patterns of genomic variation and admixture in gray wolves ⬇️

artículo científico publicado en 2016

The era of reference genomes in conservation genomics

artículo científico publicado en 2022

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