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Lista de obras de Alex Pico

A low-frequency variant at 8q24.21 is strongly associated with risk of oligodendroglial tumors and astrocytomas with IDH1 or IDH2 mutation

artículo científico publicado en 2012

A travel guide to Cytoscape plugins

artículo científico publicado en 2012

Affinity purification-mass spectrometry and network analysis to understand protein-protein interactions

artículo científico publicado en 2014

Alternative splicing in the differentiation of human embryonic stem cells into cardiac precursors

artículo científico publicado en 2009

Alternative splicing regulates mouse embryonic stem cell pluripotency and differentiation

artículo científico publicado en 2010

An Introduction to Pathway Analysis with GenMAPP

Analysis of 60 reported glioma risk SNPs replicates published GWAS findings but fails to replicate associations from published candidate-gene studies

artículo científico publicado en 2012

Associations of Circulating Extracellular RNAs With Myocardial Remodeling and Heart Failure

scientific article published on 01 September 2018

Author Correction: COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms

scientific article published on 17 July 2020

Author Correction: Transcriptional profiling and therapeutic targeting of oxidative stress in neuroinflammation

artículo científico publicado en 2020

BioHackJP 2023 Report R3: Expand the pathway analysis environment to non-model organisms

Biolink Model: A Universal Schema for Knowledge Graphs in Clinical, Biomedical, and Translational Science ⬇️

artículo científico publicado en 2022

BridgeDb app: unifying identifier mapping services for Cytoscape

artículo científico

COVID-19 Disease Map, a computational knowledge repository of SARS-CoV-2 virus-host interaction mechanisms

COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms

artículo científico publicado en 2020

COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms ⬇️

artículo científico

Circulating miRNAs and Risk of Sudden Death in Patients With Coronary Heart Disease

artículo científico publicado en 2019

Comprehensive Metabolic Phenotyping Refines Cardiovascular Risk in Young Adults

artículo científico publicado en 2020

Corrigendum: The BioPAX community standard for pathway data sharing

correction; published 7 December 2010

Crystal structure of Hck in complex with a Src family-selective tyrosine kinase inhibitor

artículo científico publicado en 1999

CyAnimator: Simple Animations of Cytoscape Networks

artículo científico publicado en 2015

Cytoscape Automation: empowering workflow-based network analysis

scientific article published on 02 September 2019

Cytoscape app store

artículo científico publicado en 2013

Drugst.One — a plug-and-play solution for online systems medicine and network-based drug repurposing

artículo científico publicado en 2024

Dynamic and coordinated epigenetic regulation of developmental transitions in the cardiac lineage

artículo científico publicado en 2012

Erratum: Corrigendum: The BioPAX community standard for pathway data sharing

scholarly article published in Nature Biotechnology

Evaluation of methods to assign cell type labels to cell clusters from single-cell RNA-sequencing data

artículo científico publicado en 2019

Extracellular RNAs Are Associated With Insulin Resistance and Metabolic Phenotypes

artículo científico publicado en 2017

Fibrin drives thromboinflammation and neuropathology in COVID-19

artículo científico publicado en 2024

Fibrin-targeting immunotherapy protects against neuroinflammation and neurodegeneration

scientific article published on 15 October 2018

Finding the right questions: exploratory pathway analysis to enhance biological discovery in large datasets

artículo científico publicado en 2010

From scientific discovery to cures: bright stars within a galaxy

artículo científico publicado en 2015

GO-Elite: a flexible solution for pathway and ontology over-representation

artículo científico publicado en 2012

GenMAPP 2: new features and resources for pathway analysis

artículo científico publicado en 2007

Genetic variants in telomerase-related genes are associated with an older age at diagnosis in glioma patients: evidence for distinct pathways of gliomagenesis

artículo científico publicado en 2013

Glioma Groups Based on 1p/19q, IDH, and TERT Promoter Mutations in Tumors

artículo científico publicado en 2015

Identifier Mapping in Cytoscape

Identifying Genes in Published Pathway Figure Images

article

Inherited variant on chromosome 11q23 increases susceptibility to IDH-mutated but not IDH-normal gliomas regardless of grade or histology

artículo científico publicado en 2013

Integration of biological networks and gene expression data using Cytoscape

artículo científico publicado en 2007

Integration of extracellular RNA profiling data using metadata, biomedical ontologies and Linked Data technologies

artículo científico publicado en 2015

Intramolecular regulatory interactions in the Src family kinase Hck probed by mutagenesis of a conserved tryptophan residue.

artículo científico publicado en 1998

Introducing R as a smart version of calculators enables beginners to explore it on their own

artículo científico publicado en 2021

Introducing R as a smart version of calculators enables beginners to explore it on their own

artículo científico publicado en 2022

Local cortical injections of glutamate and noradrenaline alter high-frequency (245Hz) neuronal activity in rat cortex

Longer genotypically-estimated leukocyte telomere length is associated with increased adult glioma risk

artículo científico publicado en 2015

Metabolic Architecture of Acute Exercise Response in Middle-Aged Adults in the Community

scientific article published on 15 September 2020

MicroRNAs Associated With Reverse Left Ventricular Remodeling in Humans Identify Pathways of Heart Failure Progression

artículo científico publicado en 2018

Mining biological pathways using WikiPathways web services

artículo científico publicado en 2009

Mir-30d Regulates Cardiac Remodeling by Intracellular And Paracrine Signaling

scientific article published on 22 October 2020

Molecular Signature of Multisystem Cardiometabolic Stress and Its Association With Prognosis

artículo científico publicado en 2020

Molecular, phenotypic, and sample-associated data to describe pluripotent stem cell lines and derivatives

artículo científico publicado en 2017

Mosaic: making biological sense of complex networks

artículo científico publicado en 2012

NOA: a cytoscape plugin for network ontology analysis

artículo científico publicado en 2013

PSFC: a Pathway Signal Flow Calculator App for Cytoscape

artículo científico publicado en 2015

PathVisio 3: an extendable pathway analysis toolbox

artículo científico publicado en 2015

Pathway analysis of single-nucleotide polymorphisms potentially associated with glioblastoma multiforme susceptibility using random forests.

artículo científico publicado en 2008

Pathway information extracted from 25 years of pathway figures

artículo científico publicado en 2020

PathwayPCA: an R/Bioconductor Package for Pathway Based Integrative Analysis of Multi-Omics Data

scientific article published on 20 May 2020

Presenting and exploring biological pathways with PathVisio

artículo científico publicado en 2008

Proteins Altered by Surgical Weight Loss Highlight Biomarkers of Insulin Resistance in the Community

scholarly article by Ravi V. Shah et al published January 2019 in Arteriosclerosis, Thrombosis, and Vascular Biology

Proteogenomic Characterization of Endometrial Carcinoma

scientific article published on 13 February 2020

Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma

artículo científico publicado en 2021

Proteomic analysis of heart failure hospitalization among patients with chronic kidney disease: The Heart and Soul Study

artículo científico publicado en 2018

RCy3: Network biology using Cytoscape from within R

artículo científico publicado en 2019

Reactome from a WikiPathways Perspective

artículo científico publicado en 2016

Research synergy and drug development: Bright stars in neighboring constellations

artículo científico publicado en 2017

SNPLogic: an interactive single nucleotide polymorphism selection, annotation, and prioritization system

artículo científico publicado en 2008

Shared Mechanisms Govern HIV Transcriptional Suppression in Circulating CD103+ and Gut CD4+ T Cells

artículo científico publicado en 2020

Structure of the RCK domain from the E. coli K+ channel and demonstration of its presence in the human BK channel

artículo científico publicado en 2001

Structure of the human BK channel Ca2+-activation apparatus at 3.0 A resolution

artículo científico publicado en 2010

TELOMERE LENGTH VARIANTS ARE ASSOCIATED WITH HIGH-GRADE GLIOMA RISK: IDENTIFICATION OF A NOVEL GLIOMA RISK LOCUS BY GENOME-WIDE ASSOCIATION STUDY.

artículo científico publicado en 2014

Ten simple rules for creating reusable pathway models for computational analysis and visualization

artículo científico

The BioPAX community standard for pathway data sharing

artículo científico publicado en 2010

The BridgeDb framework: standardized access to gene, protein and metabolite identifier mapping services

artículo científico publicado en 2010

The Cytoscape Automation app article collection.

artículo científico publicado en 2018

The Cytoscape app article collection.

artículo científico publicado en 2014

The Dynamic Platelet Transcriptome in Obesity and Weight Loss

scientific article published on 10 December 2020

The emerging world of wikis

artículo científico publicado en 2008

The public road to high-quality curated biological pathways

artículo científico publicado en 2008

Transcriptional profiling and therapeutic targeting of oxidative stress in neuroinflammation

artículo científico publicado en 2020

Translational Epidemiology: Entering a Brave New World of Team Science

artículo científico publicado en 2016

Using the Semantic Web for Rapid Integration of WikiPathways with Other Biological Online Data Resources

artículo científico publicado en 2016

Variants in the CDKN2B and RTEL1 regions are associated with high-grade glioma susceptibility

artículo científico publicado en 2009

Variants near TERT and TERC influencing telomere length are associated with high-grade glioma risk

artículo científico publicado en 2014

WikiPathways 2024: next generation pathway database

artículo científico publicado en 2023

WikiPathways App for Cytoscape: Making biological pathways amenable to network analysis and visualization

artículo científico publicado en 2014

WikiPathways App for Cytoscape: Making biological pathways amenable to network analysis and visualization

artículo científico publicado en 2014

WikiPathways: a multifaceted pathway database bridging metabolomics to other omics research

artículo científico publicado en 2017

WikiPathways: building research communities on biological pathways

artículo científico publicado en 2012

WikiPathways: capturing the full diversity of pathway knowledge

artículo científico

WikiPathways: connecting communities ⬇️

artículo científico publicado en 2020

WikiPathways: pathway editing for the people

artículo científico

Wikidata as a FAIR knowledge graph for the life sciences

scholarly article

enhancedGraphics: a Cytoscape app for enhanced node graphics

artículo científico publicado en 2014

exRNA Atlas Analysis Reveals Distinct Extracellular RNA Cargo Types and Their Carriers Present across Human Biofluids

scientific article published on 01 April 2019

scNetViz: from single cells to networks using Cytoscape

scientific article published on 07 June 2021

setsApp for Cytoscape: Set operations for Cytoscape Nodes and Edges.

artículo científico publicado en 2014

Author response: Wikidata as a knowledge graph for the life sciences

Wikidata as a knowledge graph for the life sciences ⬇️

artículo científico publicado en 2020

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