Lista de obras - Aron Charles Eklund - Dominio Público Uruguay

A large-scale analysis of tissue-specific pathology and gene expression of human disease genes and complexes

scholarly article

A robust prognostic gene expression signature for early stage lung adenocarcinoma

artículo científico publicado en 2016

A signature of chromosomal instability inferred from gene expression profiles predicts clinical outcome in multiple human cancers

artículo científico publicado en 2006

An Analysis of Natural T Cell Responses to Predicted Tumor Neoepitopes.

artículo científico publicado en 2017

An online survival analysis tool to rapidly assess the effect of 22,277 genes on breast cancer prognosis using microarray data of 1,809 patients

artículo científico publicado en 2009

Assessment of an RNA interference screen-derived mitotic and ceramide pathway metagene as a predictor of response to neoadjuvant paclitaxel for primary triple-negative breast cancer: a retrospective analysis of five clinical trials

artículo científico publicado en 2010

Biasogram: visualization of confounding technical bias in gene expression data

artículo científico publicado en 2013

Bifidobacteriumbreve Bif195 Protects Against Small-Intestinal Damage Caused by Acetylsalicylic Acid in Healthy Volunteers

scientific article published on 13 May 2019

Breast cancer brain metastases show increased levels of genomic aberration-based homologous recombination deficiency scores relative to their corresponding primary tumors

artículo científico publicado en 2018

Chromosomal instability determines taxane response

scholarly article

Computational prediction of neoantigens: do we need more data or new approaches?

artículo científico publicado en 2018

Concordance of exon array and real-time PCR assessment of gene expression following cancer cell cytotoxic drug exposure

artículo científico publicado en 2008

Consistent metagenes from cancer expression profiles yield agent specific predictors of chemotherapy response

artículo científico publicado en 2011

Correction of technical bias in clinical microarray data improves concordance with known biological information

artículo científico publicado en 2008

Deconvoluting complex tissues for expression quantitative trait locus-based analyses

artículo científico publicado en 2013

Efficacy of neoadjuvant Cisplatin in triple-negative breast cancer

artículo científico publicado en 2010

Evaluation of microarray preprocessing algorithms based on concordance with RT-PCR in clinical samples

artículo científico publicado en 2009

GATA transcription factors directly regulate the Parkinson's disease-linked gene alpha-synuclein

artículo científico publicado en 2008

Glioblastoma adaptation traced through decline of an IDH1 clonal driver and macro-evolution of a double-minute chromosome

artículo científico publicado en 2015

Intratumor Heterogeneity and Branched Evolution Revealed by Multiregion Sequencing

artículo científico publicado en 2012

Jetset: selecting the optimal microarray probe set to represent a gene

artículo científico publicado en 2011

Large-scale detection of antigen-specific T cells using peptide-MHC-I multimers labeled with DNA barcodes.

artículo científico publicado en 2016

MECP2 Is a Frequently Amplified Oncogene with a Novel Epigenetic Mechanism That Mimics the Role of Activated RAS in Malignancy

artículo científico publicado en 2015

MicroRNA profile analysis of human prostate cancers

artículo científico publicado en 2008

Migrating the SNP array-based homologous recombination deficiency measures to next generation sequencing data of breast cancer.

artículo científico publicado en 2018

Minimising immunohistochemical false negative ER classification using a complementary 23 gene expression signature of ER status

artículo científico publicado en 2010

Molecular markers of early Parkinson's disease based on gene expression in blood

artículo científico publicado en 2007

MuPeXI: prediction of neo-epitopes from tumor sequencing data.

artículo científico publicado en 2017

Optimization of the BLASTN substitution matrix for prediction of non-specific DNA microarray hybridization

artículo científico publicado en 2009

PGC-1α, a potential therapeutic target for early intervention in Parkinson's disease

artículo científico publicado en 2010

Pan-cancer analysis of genomic scar signatures associated with homologous recombination deficiency suggests novel indications for existing cancer drugs

artículo científico publicado en 2015

Paradoxical relationship between chromosomal instability and survival outcome in cancer

artículo científico publicado en 2011

Prediction of drug efficacy for cancer treatment based on comparative analysis of chemosensitivity and gene expression data

artículo científico publicado en 2011

Predictive biomarker discovery through the parallel integration of clinical trial and functional genomics datasets

artículo científico publicado en 2010

Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in cancer-associated gene expression measurements

artículo científico publicado en 2005

Relationship of extreme chromosomal instability with long-term survival in a retrospective analysis of primary breast cancer

artículo científico publicado en 2011

Relationship of postoperative thrombocytosis and survival of patients with colorectal cancer

artículo científico publicado en 2015

Reliability and reproducibility issues in DNA microarray measurements

artículo científico publicado en 2006

Replacing cRNA targets with cDNA reduces microarray cross-hybridization

Sequenza: allele-specific copy number and mutation profiles from tumor sequencing data.

artículo científico publicado en 2014

Spatiotemporal patterns of gene expression during fetal monkey brain development

artículo científico publicado en 2003

Strand Orientation Bias Detector (SOBDetector) to remove artifacts from sequencing data of formalin fixed samples

article

Telomeric allelic imbalance indicates defective DNA repair and sensitivity to DNA-damaging agents

scientific article published on 22 March 2012

The CIN4 chromosomal instability qPCR classifier defines tumor aneuploidy and stratifies outcome in grade 2 breast cancer.

artículo científico publicado en 2013

The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements

artículo científico publicado en 2006

The comparison of thrombocytosis and platelet-lymphocyte ratio as potential prognostic markers in colorectal cancer.

artículo científico publicado en 2013

Tumor mutation burden forecasts outcome in ovarian cancer with BRCA1 or BRCA2 mutations

artículo científico publicado en 2013

TumorTracer: a method to identify the tissue of origin from the somatic mutations of a tumor specimen

artículo científico publicado en 2015

[Evaluation of thrombocytosis as predictive factor in colorectal cancer].

artículo científico publicado en 2013

Lista de obras de Aron Charles Eklund

A large-scale analysis of tissue-specific pathology and gene expression of human disease genes and complexes

A robust prognostic gene expression signature for early stage lung adenocarcinoma

A signature of chromosomal instability inferred from gene expression profiles predicts clinical outcome in multiple human cancers

An Analysis of Natural T Cell Responses to Predicted Tumor Neoepitopes.

An online survival analysis tool to rapidly assess the effect of 22,277 genes on breast cancer prognosis using microarray data of 1,809 patients

Assessment of an RNA interference screen-derived mitotic and ceramide pathway metagene as a predictor of response to neoadjuvant paclitaxel for primary triple-negative breast cancer: a retrospective analysis of five clinical trials

Biasogram: visualization of confounding technical bias in gene expression data

Bifidobacteriumbreve Bif195 Protects Against Small-Intestinal Damage Caused by Acetylsalicylic Acid in Healthy Volunteers

Breast cancer brain metastases show increased levels of genomic aberration-based homologous recombination deficiency scores relative to their corresponding primary tumors

Chromosomal instability determines taxane response

Computational prediction of neoantigens: do we need more data or new approaches?

Concordance of exon array and real-time PCR assessment of gene expression following cancer cell cytotoxic drug exposure

Consistent metagenes from cancer expression profiles yield agent specific predictors of chemotherapy response

Correction of technical bias in clinical microarray data improves concordance with known biological information

Deconvoluting complex tissues for expression quantitative trait locus-based analyses

Efficacy of neoadjuvant Cisplatin in triple-negative breast cancer

Evaluation of microarray preprocessing algorithms based on concordance with RT-PCR in clinical samples

GATA transcription factors directly regulate the Parkinson's disease-linked gene alpha-synuclein

Glioblastoma adaptation traced through decline of an IDH1 clonal driver and macro-evolution of a double-minute chromosome

Intratumor Heterogeneity and Branched Evolution Revealed by Multiregion Sequencing

Jetset: selecting the optimal microarray probe set to represent a gene

Large-scale detection of antigen-specific T cells using peptide-MHC-I multimers labeled with DNA barcodes.

MECP2 Is a Frequently Amplified Oncogene with a Novel Epigenetic Mechanism That Mimics the Role of Activated RAS in Malignancy

MicroRNA profile analysis of human prostate cancers

Migrating the SNP array-based homologous recombination deficiency measures to next generation sequencing data of breast cancer.

Minimising immunohistochemical false negative ER classification using a complementary 23 gene expression signature of ER status

Molecular markers of early Parkinson's disease based on gene expression in blood

MuPeXI: prediction of neo-epitopes from tumor sequencing data.

Optimization of the BLASTN substitution matrix for prediction of non-specific DNA microarray hybridization

PGC-1α, a potential therapeutic target for early intervention in Parkinson's disease

Pan-cancer analysis of genomic scar signatures associated with homologous recombination deficiency suggests novel indications for existing cancer drugs

Paradoxical relationship between chromosomal instability and survival outcome in cancer

Prediction of drug efficacy for cancer treatment based on comparative analysis of chemosensitivity and gene expression data

Predictive biomarker discovery through the parallel integration of clinical trial and functional genomics datasets

Redefinition of Affymetrix probe sets by sequence overlap with cDNA microarray probes reduces cross-platform inconsistencies in cancer-associated gene expression measurements

Relationship of extreme chromosomal instability with long-term survival in a retrospective analysis of primary breast cancer

Relationship of postoperative thrombocytosis and survival of patients with colorectal cancer

Reliability and reproducibility issues in DNA microarray measurements

Replacing cRNA targets with cDNA reduces microarray cross-hybridization

Sequenza: allele-specific copy number and mutation profiles from tumor sequencing data.

Spatiotemporal patterns of gene expression during fetal monkey brain development

Strand Orientation Bias Detector (SOBDetector) to remove artifacts from sequencing data of formalin fixed samples

Telomeric allelic imbalance indicates defective DNA repair and sensitivity to DNA-damaging agents

The CIN4 chromosomal instability qPCR classifier defines tumor aneuploidy and stratifies outcome in grade 2 breast cancer.

The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements

The comparison of thrombocytosis and platelet-lymphocyte ratio as potential prognostic markers in colorectal cancer.

Tumor mutation burden forecasts outcome in ovarian cancer with BRCA1 or BRCA2 mutations

TumorTracer: a method to identify the tissue of origin from the somatic mutations of a tumor specimen

[Evaluation of thrombocytosis as predictive factor in colorectal cancer].