Lista de obras - Paulien Hogeweg - Dominio Público Uruguay

A synergism between adaptive effects and evolvability drives whole genome duplication to fixation

artículo científico publicado en 2014

Auxin transport is sufficient to generate a maximum and gradient guiding root growth

artículo científico publicado en 2007

Bioinformatic analysis of functional differences between the immunoproteasome and the constitutive proteasome

artículo científico publicado en 2003

Coevolution of gene families in prokaryotes

artículo científico publicado en 2008

Computing an organism: on the interface between informatic and dynamic processes ⬇️

artículo científico publicado el 1 de enero de 2002

Eco-evolutionary dynamics, coding structure and the information threshold ⬇️

artículo científico publicado el 24 de noviembre de 2010

Error-threshold exists in fitness landscapes with lethal mutants

artículo científico publicado en 2007

Evolution of Networks for Body Plan Patterning; Interplay of Modularity, Robustness and Evolvability ⬇️

artículo científico publicado el 6 de octubre de 2011

Evolution of complexity in RNA-like replicator systems

artículo científico publicado en 2008

Evolution of evolvability and phenotypic plasticity in virtual cells

artículo científico publicado en 2017

Evolution of evolvability in gene regulatory networks

artículo científico publicado en 2008

Evolution of functional diversification within quasispecies

artículo científico publicado en 2014

Evolution of resource cycling in ecosystems and individuals

artículo científico publicado en 2009

Evolutionarily stable disequilibrium: endless dynamics of evolution in a stationary population

artículo científico publicado en 2016

Evolutionary Conflict Leads to Innovation: Symmetry Breaking in a Spatial Model of RNA-Like Replicators

artículo científico publicado en 2017

Evolutionary dynamics of RNA-like replicator systems: A bioinformatic approach to the origin of life ⬇️

artículo científico publicado el 13 de junio de 2012

Feed-forward loop circuits as a side effect of genome evolution

artículo científico publicado en 2006

Gene duplications contribute to the overrepresentation of interactions between proteins of a similar age.

artículo científico publicado en 2012

High cost enhances cooperation through the interplay between evolution and self-organisation

artículo científico publicado en 2016

In Silico Gene-Level Evolution Explains Microbial Population Diversity through Differential Gene Mobility

artículo científico publicado en 2015

In silico evo-devo: reconstructing stages in the evolution of animal segmentation

artículo científico publicado en 2016

Is RNA-dependent RNA polymerase essential for transposon control?

artículo científico publicado en 2011

James A. Shapiro: Evolution: a view from the twenty-first century: FT Press Science, Upper Saddle River, New Jersey 07458, ISBN 10: 0-13278093-3.

artículo científico publicado en 2012

Less Can Be More: RNA-Adapters May Enhance Coding Capacity of Replicators ⬇️

artículo científico publicado el 23 de enero de 2012

Metabolic adaptation after whole genome duplication.

artículo científico publicado en 2009

Modelling Dictyostelium discoideum morphogenesis: the culmination

artículo científico publicado en 2002

Modelling Morphogenesis: From Single Cells to Crawling Slugs

article

Modelling the dynamics of viral suppressors of RNA silencing

artículo científico publicado en 2011

Morphogengineering roots: comparing mechanisms of morphogen gradient formation

artículo científico publicado en 2012

Moving forward moving backward: directional sorting of chemotactic cells due to size and adhesion differences

artículo científico publicado en 2006

Multilevel selection in models of prebiotic evolution II: a direct comparison of compartmentalization and spatial self-organization

artículo científico publicado en 2009

Multilevel selection in models of prebiotic evolution: compartments and spatial self-organization

artículo científico publicado el 1 de octubre de 2003

Mutation rates and evolution of multiple coding in RNA-based protocells

artículo científico publicado en 2014

On the Origin of DNA Genomes: Evolution of the Division of Labor between Template and Catalyst in Model Replicator Systems ⬇️

artículo científico publicado el 24 de marzo de 2011

Parasites Sustain and Enhance RNA-Like Replicators through Spatial Self-Organisation

artículo científico publicado en 2016

Pattern generation in molecular evolution: Exploitation of the variation in RNA landscapes

artículo científico publicado en 1994

Phenotypic error threshold; additivity and epistasis in RNA evolution

artículo científico publicado en 2005

Regulome size in Prokaryotes: universality and lineage-specific variations

artículo científico publicado en 2009

Resource distributions affect social learning on multiple timescales

artículo científico publicado en 2009

Root system architecture from coupling cell shape to auxin transport

artículo científico publicado en 2008

Segment-specific adhesion as a driver of convergent extension

artículo científico publicado en 2015

Space and the persistence of male-killing endosymbionts in insect populations

artículo científico publicado en 2002

The RNA silencing pathway: the bits and pieces that matter

artículo científico publicado en 2005

The Roots of Bioinformatics in Theoretical Biology ⬇️

artículo científico publicado el 31 de marzo de 2011

The consequences of base pair composition biases for regulatory network organization in prokaryotes

artículo científico publicado en 2009

The dynamics and efficacy of antiviral RNA silencing: A model study

artículo científico publicado en 2008

The effect of stochasticity on the lac operon: an evolutionary perspective

artículo científico publicado en 2007

The evolution of strand preference in simulated RNA replicators with strand displacement: implications for the origin of transcription

artículo científico publicado en 2008

The impact of long-distance horizontal gene transfer on prokaryotic genome size

artículo científico publicado en 2009

The origin of a primordial genome through spontaneous symmetry breaking

artículo científico publicado en 2017

The role of complex formation and deleterious mutations for the stability of RNA-like replicator systems

artículo científico publicado en 2007

The role of genome and gene regulatory network canalization in the evolution of multi-trait polymorphisms and sympatric speciation

artículo científico publicado en 2009

Toward a Theory of Multilevel Evolution: Long-Term Information Integration Shapes the Mutational Landscape and Enhances Evolvability ⬇️

artículo científico publicado el 1 de enero de 2012

Virtual Genomes in Flux: An Interplay of Neutrality and Adaptability Explains Genome Expansion and Streamlining ⬇️

artículo científico publicado el 10 de enero de 2012

Lista de obras de Paulien Hogeweg

A synergism between adaptive effects and evolvability drives whole genome duplication to fixation

Auxin transport is sufficient to generate a maximum and gradient guiding root growth

Bioinformatic analysis of functional differences between the immunoproteasome and the constitutive proteasome

Coevolution of gene families in prokaryotes

Computing an organism: on the interface between informatic and dynamic processes ⬇️

Eco-evolutionary dynamics, coding structure and the information threshold ⬇️

Error-threshold exists in fitness landscapes with lethal mutants

Evolution of Networks for Body Plan Patterning; Interplay of Modularity, Robustness and Evolvability ⬇️

Evolution of complexity in RNA-like replicator systems

Evolution of evolvability and phenotypic plasticity in virtual cells

Evolution of evolvability in gene regulatory networks

Evolution of functional diversification within quasispecies

Evolution of resource cycling in ecosystems and individuals

Evolutionarily stable disequilibrium: endless dynamics of evolution in a stationary population

Evolutionary Conflict Leads to Innovation: Symmetry Breaking in a Spatial Model of RNA-Like Replicators

Evolutionary dynamics of RNA-like replicator systems: A bioinformatic approach to the origin of life ⬇️

Feed-forward loop circuits as a side effect of genome evolution

Gene duplications contribute to the overrepresentation of interactions between proteins of a similar age.

High cost enhances cooperation through the interplay between evolution and self-organisation

In Silico Gene-Level Evolution Explains Microbial Population Diversity through Differential Gene Mobility

In silico evo-devo: reconstructing stages in the evolution of animal segmentation

Is RNA-dependent RNA polymerase essential for transposon control?

James A. Shapiro: Evolution: a view from the twenty-first century: FT Press Science, Upper Saddle River, New Jersey 07458, ISBN 10: 0-13278093-3.

Less Can Be More: RNA-Adapters May Enhance Coding Capacity of Replicators ⬇️

Metabolic adaptation after whole genome duplication.

Modelling Dictyostelium discoideum morphogenesis: the culmination

Modelling Morphogenesis: From Single Cells to Crawling Slugs

Modelling the dynamics of viral suppressors of RNA silencing

Morphogengineering roots: comparing mechanisms of morphogen gradient formation

Moving forward moving backward: directional sorting of chemotactic cells due to size and adhesion differences

Multilevel selection in models of prebiotic evolution II: a direct comparison of compartmentalization and spatial self-organization

Multilevel selection in models of prebiotic evolution: compartments and spatial self-organization

Mutation rates and evolution of multiple coding in RNA-based protocells

On the Origin of DNA Genomes: Evolution of the Division of Labor between Template and Catalyst in Model Replicator Systems ⬇️

Parasites Sustain and Enhance RNA-Like Replicators through Spatial Self-Organisation

Pattern generation in molecular evolution: Exploitation of the variation in RNA landscapes

Phenotypic error threshold; additivity and epistasis in RNA evolution

Regulome size in Prokaryotes: universality and lineage-specific variations

Resource distributions affect social learning on multiple timescales

Root system architecture from coupling cell shape to auxin transport

Segment-specific adhesion as a driver of convergent extension

Space and the persistence of male-killing endosymbionts in insect populations

The RNA silencing pathway: the bits and pieces that matter

The Roots of Bioinformatics in Theoretical Biology ⬇️

The consequences of base pair composition biases for regulatory network organization in prokaryotes

The dynamics and efficacy of antiviral RNA silencing: A model study

The effect of stochasticity on the lac operon: an evolutionary perspective

The evolution of strand preference in simulated RNA replicators with strand displacement: implications for the origin of transcription

The impact of long-distance horizontal gene transfer on prokaryotic genome size

The origin of a primordial genome through spontaneous symmetry breaking

The role of complex formation and deleterious mutations for the stability of RNA-like replicator systems

The role of genome and gene regulatory network canalization in the evolution of multi-trait polymorphisms and sympatric speciation

Toward a Theory of Multilevel Evolution: Long-Term Information Integration Shapes the Mutational Landscape and Enhances Evolvability ⬇️

Virtual Genomes in Flux: An Interplay of Neutrality and Adaptability Explains Genome Expansion and Streamlining ⬇️