Lista de obras - Sorin Draghici - Dominio Público Uruguay

A Novel Pathway Analysis Approach Based on the Unexplained Disregulation of Genes

article

A common pattern of persistent gene activation in human neocortical epileptic foci

artículo científico publicado en 2005

A method for analysis and correction of cross-talk effects in pathway analysis

A molecular signature of an arrest of descent in human parturition

artículo científico publicado en 2011

A novel approach for data integration and disease subtyping

artículo científico publicado en 2017

A novel bi-level meta-analysis approach: applied to biological pathway analysis

artículo científico publicado en 2015

A novel signaling pathway impact analysis.

artículo científico publicado en 2008

A semantic analysis of the annotations of the human genome

artículo científico

A survey of small RNAs in human sperm

artículo científico publicado en 2011

A survey of the approaches for identifying differential methylation using bisulfite sequencing data

artículo científico publicado en 2017

A systems biology approach for pathway level analysis

artículo científico publicado en 2007

Accuracy of cDNA microarray methods to detect small gene expression changes induced by neuregulin on breast epithelial cells

artículo científico publicado en 2004

Analysis and correction of crosstalk effects in pathway analysis

artículo científico publicado en 2013

Analysis of microarray experiments of gene expression profiling.

artículo científico publicado en 2006

Application of an objective method for localizing bilateral cortical FDG PET abnormalities to guide the resection of epileptic foci.

artículo científico publicado en 2005

Assessing co-regulation of directly linked genes in biological networks using microarray time series analysis

artículo científico publicado en 2013

Autoantibody approach for serum-based detection of head and neck cancer.

artículo científico publicado en 2007

Babel's tower revisited: a universal resource for cross-referencing across annotation databases

artículo científico

COVID-19: disease pathways and gene expression changes predict methylprednisolone can improve outcome in severe cases

artículo científico publicado en 2020

CPA: a web-based platform for consensus pathway analysis and interactive visualization

artículo científico publicado en 2021

Characterization of the myometrial transcriptome and biological pathways of spontaneous human labor at term

artículo científico publicado en 2010

Characterization of the myometrial transcriptome in women with an arrest of dilatation during labor

artículo científico publicado en 2013

DANUBE: Data-driven meta-ANalysis using UnBiased Empirical distributions-applied to biological pathway analysis.

artículo científico publicado en 2016

DC-ATLAS: a systems biology resource to dissect receptor specific signal transduction in dendritic cells

artículo científico publicado en 2010

Detecting qualitative changes in biological systems

scientific article published on 18 May 2020

Developing classifiers for the detection of cancer using multi-analytes

artículo científico publicado en 2009

Diagnostic markers of ovarian cancer by high-throughput antigen cloning and detection on arrays.

artículo científico publicado en 2006

Differences and similarities in the transcriptional profile of peripheral whole blood in early and late-onset preeclampsia: insights into the molecular basis of the phenotype of preeclampsiaa

artículo científico publicado en 2013

Differential expression of microRNAs with progression of gestation and inflammation in the human chorioamniotic membranes.

artículo científico publicado en 2007

Differential expression pattern of genes encoding for anti-microbial peptides in the fetal membranes of patients with spontaneous preterm labor and intact membranes and those with preterm prelabor rupture of the membranes

artículo científico publicado en 2009

Differential expression pattern of genes encoding for anti-microbial peptides in the fetal membranes of patients with spontaneous preterm labor and intact membranes and those with preterm prelabor rupture of the membranes

article

Discoveries: an innovative platform for publishing cutting-edge research discoveries in medicine, biology and chemistry

scientific article published on 31 December 2013

Distilled single-cell genome sequencing and de novo assembly for sparse microbial communities

artículo científico publicado en 2013

Distinct subsets of microRNAs are expressed differentially in the human placentas of patients with preeclampsia.

artículo científico

Down-weighting overlapping genes improves gene set analysis

artículo científico publicado en 2012

Epigenetic silencing of multiple interferon pathway genes after cellular immortalization.

artículo científico publicado en 2003

Expression patterns of microRNAs in the chorioamniotic membranes: a role for microRNAs in human pregnancy and parturition.

artículo científico publicado en 2009

Gene expression profiles predict survival and progression of pleural mesothelioma.

artículo científico publicado en 2004

Gene expression profiling demonstrates a novel role for foetal fibrocytes and the umbilical vessels in human fetoplacental development.

artículo científico publicado en 2008

Global functional profiling of gene expression.

artículo científico

Identification of cell types from single cell data using stable clustering

artículo científico publicado en 2020

Identification of novel type 2 diabetes candidate genes involved in the crosstalk between the mitochondrial and the insulin signaling systems

artículo científico publicado en 2012

Identifying significantly impacted pathways: a comprehensive review and assessment

scientific article published on 09 October 2019

Increased interaction with insulin receptor substrate 1, a novel abnormality in insulin resistance and type 2 diabetes.

artículo científico publicado en 2014

Integrated Systems Biology Approach Identifies Novel Maternal and Placental Pathways of Preeclampsia

Intelligent Informatics in Translational Medicine

artículo científico publicado en 2015

Intelligent informatics in biomedicine

artículo científico publicado en 2013

KUTE-BASE: storing, downloading and exporting MIAME-compliant microarray experiments in minutes rather than hours

artículo científico publicado en 2007

MAGPEL: an autoMated pipeline for inferring vAriant-driven Gene PanEls from the full-length biomedical literature

scientific article published on 23 July 2020

MICRORNA-AUGMENTED PATHWAYS (mirAP) AND THEIR APPLICATIONS TO PATHWAY ANALYSIS AND DISEASE SUBTYPING

artículo científico publicado en 2016

MicroRNA expression profiling of the human uterine cervix after term labor and delivery.

artículo científico publicado en 2009

Mining HIV dynamics using independent component analysis

artículo científico publicado en 2003

Mitochondrial manganese superoxide dismutase mRNA expression in human chorioamniotic membranes and its association with labor, inflammation, and infection

artículo científico publicado en 2009

Mitochondrial manganese superoxide dismutase mRNA expression in human chorioamniotic membranes and its association with labor, inflammation, and infection

Modeling time-dependent transcription effects of HER2 oncogene and discovery of a role for E2F2 in breast cancer cell-matrix adhesion

artículo científico publicado en 2014

NBIA: a network-based integrative analysis framework - applied to pathway analysis

artículo científico publicado en 2020

NetPath: a public resource of curated signal transduction pathways

artículo científico publicado en 2010

New Onto-Tools: Promoter-Express, nsSNPCounter and Onto-Translate

artículo científico publicado en 2006

Noise sampling method: an ANOVA approach allowing robust selection of differentially regulated genes measured by DNA microarrays

artículo científico publicado en 2003

Nuclear matrix association of the human beta-globin locus utilizing a novel approach to quantitative real-time PCR

artículo científico publicado en 2003

On the capabilities of neural networks using limited precision weights

artículo científico publicado en 2002

Onto-Tools, the toolkit of the modern biologist: Onto-Express, Onto-Compare, Onto-Design and Onto-Translate

artículo científico

Onto-Tools: an ensemble of web-accessible, ontology-based tools for the functional design and interpretation of high-throughput gene expression experiments

artículo científico

Onto-Tools: new additions and improvements in 2006.

artículo científico

Ontological analysis of gene expression data: current tools, limitations, and open problems

artículo científico publicado en 2005

Overcoming the matched-sample bottleneck: an orthogonal approach to integrate omic data

artículo científico publicado en 2016

Pathway crosstalk effects: shrinkage and disentanglement using a Bayesian hierarchical model

article published in 2016

Placenta-Specific Genes, Their Regulation During Villous Trophoblast Differentiation and Dysregulation in Preterm Preeclampsia

scientific article published on 17 January 2020

Predicting HIV drug resistance with neural networks

artículo científico publicado en 2003

Predicting novel human gene ontology annotations using semantic analysis

artículo científico

Profiling Gene Expression Using Onto-Express

article

Quantitative proteomics reveals novel protein interaction partners of PP2A catalytic subunit in pancreatic β-cells

artículo científico publicado en 2016

Region-specific gene expression profiling: novel evidence for biological heterogeneity of the human amnion

artículo científico publicado en 2008

Reliability and reproducibility issues in DNA microarray measurements

artículo científico publicado en 2006

SPATIAL: A System-level PAThway Impact AnaLysis approach.

artículo científico publicado en 2016

Serum prognostic biomarkers in head and neck cancer patients.

artículo científico publicado en 2014

Signature pathways identified from gene expression profiles in the human uterine cervix before and after spontaneous term parturition

artículo científico publicado en 2007

Statistical intelligence: effective analysis of high-density microarray data

artículo científico publicado en 2002

Surfactant protein-A as an anti-inflammatory component in the amnion: implications for human pregnancy

artículo científico publicado en 2010

The Biological Connection Markup Language: a SBGN-compliant format for visualization, filtering and analysis of biological pathways.

artículo científico publicado en 2011

The constraint based decomposition (CBD) training architecture.

artículo científico publicado en 2001

The peripheral whole-blood transcriptome of acute pyelonephritis in human pregnancya

artículo científico

The prediction of early preeclampsia: Results from a longitudinal proteomics study

scientific article published on 04 June 2019

The transcriptome of cervical ripening in human pregnancy before the onset of labor at term: identification of novel molecular functions involved in this process

artículo científico publicado en 2009

The transcriptome of the fetal inflammatory response syndrome

artículo científico publicado en 2010

Transforming function of the LSM1 oncogene in human breast cancers with the 8p11-12 amplicon

artículo científico publicado en 2007

Use and misuse of the gene ontology annotations

artículo científico publicado en 2008

Villitis of unknown etiology is associated with a distinct pattern of chemokine up-regulation in the feto-maternal and placental compartments: implications for conjoint maternal allograft rejection and maternal anti-fetal graft-versus-host disease

artículo científico publicado en 2009

Whole-genome microarray and targeted analysis of angiogenesis-regulating gene expression (ENG, FLT1, VEGF, PlGF) in placentas from pre-eclamptic and small-for-gestational-age pregnancies

article

miR-210 targets iron-sulfur cluster scaffold homologue in human trophoblast cell lines: siderosis of interstitial trophoblasts as a novel pathology of preterm preeclampsia and small-for-gestational-age pregnancies

artículo científico publicado en 2011

Lista de obras de Sorin Draghici

A Novel Pathway Analysis Approach Based on the Unexplained Disregulation of Genes

A common pattern of persistent gene activation in human neocortical epileptic foci

A method for analysis and correction of cross-talk effects in pathway analysis

A molecular signature of an arrest of descent in human parturition

A novel approach for data integration and disease subtyping

A novel bi-level meta-analysis approach: applied to biological pathway analysis

A novel signaling pathway impact analysis.

A semantic analysis of the annotations of the human genome

A survey of small RNAs in human sperm

A survey of the approaches for identifying differential methylation using bisulfite sequencing data

A systems biology approach for pathway level analysis

Accuracy of cDNA microarray methods to detect small gene expression changes induced by neuregulin on breast epithelial cells

Analysis and correction of crosstalk effects in pathway analysis

Analysis of microarray experiments of gene expression profiling.

Application of an objective method for localizing bilateral cortical FDG PET abnormalities to guide the resection of epileptic foci.

Assessing co-regulation of directly linked genes in biological networks using microarray time series analysis

Autoantibody approach for serum-based detection of head and neck cancer.

Babel's tower revisited: a universal resource for cross-referencing across annotation databases

COVID-19: disease pathways and gene expression changes predict methylprednisolone can improve outcome in severe cases

CPA: a web-based platform for consensus pathway analysis and interactive visualization

Characterization of the myometrial transcriptome and biological pathways of spontaneous human labor at term

Characterization of the myometrial transcriptome in women with an arrest of dilatation during labor

DANUBE: Data-driven meta-ANalysis using UnBiased Empirical distributions-applied to biological pathway analysis.

DC-ATLAS: a systems biology resource to dissect receptor specific signal transduction in dendritic cells

Detecting qualitative changes in biological systems

Developing classifiers for the detection of cancer using multi-analytes

Diagnostic markers of ovarian cancer by high-throughput antigen cloning and detection on arrays.

Differences and similarities in the transcriptional profile of peripheral whole blood in early and late-onset preeclampsia: insights into the molecular basis of the phenotype of preeclampsiaa

Differential expression of microRNAs with progression of gestation and inflammation in the human chorioamniotic membranes.

Differential expression pattern of genes encoding for anti-microbial peptides in the fetal membranes of patients with spontaneous preterm labor and intact membranes and those with preterm prelabor rupture of the membranes

Differential expression pattern of genes encoding for anti-microbial peptides in the fetal membranes of patients with spontaneous preterm labor and intact membranes and those with preterm prelabor rupture of the membranes

Discoveries: an innovative platform for publishing cutting-edge research discoveries in medicine, biology and chemistry

Distilled single-cell genome sequencing and de novo assembly for sparse microbial communities

Distinct subsets of microRNAs are expressed differentially in the human placentas of patients with preeclampsia.

Down-weighting overlapping genes improves gene set analysis

Epigenetic silencing of multiple interferon pathway genes after cellular immortalization.

Expression patterns of microRNAs in the chorioamniotic membranes: a role for microRNAs in human pregnancy and parturition.

Gene expression profiles predict survival and progression of pleural mesothelioma.

Gene expression profiling demonstrates a novel role for foetal fibrocytes and the umbilical vessels in human fetoplacental development.

Global functional profiling of gene expression.

Identification of cell types from single cell data using stable clustering

Identification of novel type 2 diabetes candidate genes involved in the crosstalk between the mitochondrial and the insulin signaling systems

Identifying significantly impacted pathways: a comprehensive review and assessment

Increased interaction with insulin receptor substrate 1, a novel abnormality in insulin resistance and type 2 diabetes.

Integrated Systems Biology Approach Identifies Novel Maternal and Placental Pathways of Preeclampsia

Intelligent Informatics in Translational Medicine

Intelligent informatics in biomedicine

KUTE-BASE: storing, downloading and exporting MIAME-compliant microarray experiments in minutes rather than hours

MAGPEL: an autoMated pipeline for inferring vAriant-driven Gene PanEls from the full-length biomedical literature

MICRORNA-AUGMENTED PATHWAYS (mirAP) AND THEIR APPLICATIONS TO PATHWAY ANALYSIS AND DISEASE SUBTYPING

MicroRNA expression profiling of the human uterine cervix after term labor and delivery.

Mining HIV dynamics using independent component analysis

Mitochondrial manganese superoxide dismutase mRNA expression in human chorioamniotic membranes and its association with labor, inflammation, and infection

Mitochondrial manganese superoxide dismutase mRNA expression in human chorioamniotic membranes and its association with labor, inflammation, and infection

Modeling time-dependent transcription effects of HER2 oncogene and discovery of a role for E2F2 in breast cancer cell-matrix adhesion

NBIA: a network-based integrative analysis framework - applied to pathway analysis

NetPath: a public resource of curated signal transduction pathways

New Onto-Tools: Promoter-Express, nsSNPCounter and Onto-Translate

Noise sampling method: an ANOVA approach allowing robust selection of differentially regulated genes measured by DNA microarrays

Nuclear matrix association of the human beta-globin locus utilizing a novel approach to quantitative real-time PCR

On the capabilities of neural networks using limited precision weights

Onto-Tools, the toolkit of the modern biologist: Onto-Express, Onto-Compare, Onto-Design and Onto-Translate

Onto-Tools: an ensemble of web-accessible, ontology-based tools for the functional design and interpretation of high-throughput gene expression experiments

Onto-Tools: new additions and improvements in 2006.

Ontological analysis of gene expression data: current tools, limitations, and open problems

Overcoming the matched-sample bottleneck: an orthogonal approach to integrate omic data

Pathway crosstalk effects: shrinkage and disentanglement using a Bayesian hierarchical model

Placenta-Specific Genes, Their Regulation During Villous Trophoblast Differentiation and Dysregulation in Preterm Preeclampsia

Predicting HIV drug resistance with neural networks

Predicting novel human gene ontology annotations using semantic analysis

Profiling Gene Expression Using Onto-Express

Quantitative proteomics reveals novel protein interaction partners of PP2A catalytic subunit in pancreatic β-cells

Region-specific gene expression profiling: novel evidence for biological heterogeneity of the human amnion

Reliability and reproducibility issues in DNA microarray measurements

SPATIAL: A System-level PAThway Impact AnaLysis approach.

Serum prognostic biomarkers in head and neck cancer patients.

Signature pathways identified from gene expression profiles in the human uterine cervix before and after spontaneous term parturition

Statistical intelligence: effective analysis of high-density microarray data

Surfactant protein-A as an anti-inflammatory component in the amnion: implications for human pregnancy