Lista de obras - Victoria Orphan - Dominio Público Uruguay

A chemosynthetic ecotone—“chemotone”—in the sediments surrounding deep‐sea methane seeps

artículo científico publicado en 2021

A hydrothermal seep on the Costa Rica margin: middle ground in a continuum of reducing ecosystems

artículo científico publicado en 2012

A novel family of functional operons encoding methane/ammonia monooxygenase-related proteins in gammaproteobacterial methanotrophs

artículo científico publicado en 2011

A novel sister clade to the enterobacteria microviruses (family Microviridae) identified in methane seep sediments

artículo científico publicado en 2014

Abundance and distribution of diverse membrane-bound monooxygenase (Cu-MMO) genes within the Costa Rica oxygen minimum zone

artículo científico publicado en 2013

Active sulfur cycling by diverse mesophilic and thermophilic microorganisms in terrestrial mud volcanoes of Azerbaijan.

artículo científico publicado en 2012

Activity and interactions of methane seep microorganisms assessed by parallel transcription and FISH-NanoSIMS analyses

artículo científico publicado en 2015

Age Mosaicism across Multiple Scales in Adult Tissues

scientific article published on 06 June 2019

Anaerobic methane oxidation coupled to manganese reduction by members of the Methanoperedenaceae

artículo científico publicado en 2020

Archaea in metazoan diets: implications for food webs and biogeochemical cycling

artículo científico publicado en 2012

Artificial electron acceptors decouple archaeal methane oxidation from sulfate reduction.

artículo científico publicado en 2016

Authigenic carbonate formation at hydrocarbon seeps in continental margin sediments: A comparative study

article

Autoendoliths: a distinct type of rock-hosted microbial life

artículo científico publicado en 2015

Autonomous application of quantitative PCR in the deep sea: in situ surveys of aerobic methanotrophs using the deep-sea environmental sample processor

artículo científico publicado en 2013

Autotrophic and heterotrophic acquisition of carbon and nitrogen by a mixotrophic chrysophyte established through stable isotope analysis

artículo científico publicado en 2017

Bacterial community shifts in taxa and diversity in response to localized organic loading in the deep sea

article

CULTIVATION, IN SITU MEASUREMENTS, AND GEOCHEMICAL TECHNIQUES FOR GEOMICROBIOLOGICAL STUDIES

Carbon isotopic heterogeneity of coenzyme F430 and membrane lipids in methane-oxidizing archaea

artículo científico publicado en 2019

Carbonate-hosted methanotrophy represents an unrecognized methane sink in the deep sea.

artículo científico publicado en 2014

Characterization of Chemosynthetic Microbial Mats Associated with Intertidal Hydrothermal Sulfur Vents in White Point, San Pedro, CA, USA.

scientific article published on 27 July 2016

Characterization of microbial associations with methanotrophic archaea and sulfate-reducing bacteria through statistical comparison of nested Magneto-FISH enrichments

artículo científico publicado en 2016

Chemotrophic microbial mats and their potential for preservation in the rock record.

artículo científico publicado en 2009

Classifying the metal dependence of uncharacterized nitrogenases

artículo científico publicado en 2012

Colonial Tube-Dwelling Ciliates Influence Methane Cycling and Microbial Diversity within Methane Seep Ecosystems

Comparative Genomics and Proteomic Analysis of Assimilatory Sulfate Reduction Pathways in Anaerobic Methanotrophic Archaea

scientific article published on 03 December 2018

Comparative analysis of methane-oxidizing archaea and sulfate-reducing bacteria in anoxic marine sediments.

artículo científico publicado en 2001

Comparative genomics reveals electron transfer and syntrophic mechanisms differentiating methanotrophic and methanogenic archaea

artículo científico publicado en 2022

Comparison of Archaeal and Bacterial Diversity in Methane Seep Carbonate Nodules and Host Sediments, Eel River Basin and Hydrate Ridge, USA.

artículo científico publicado en 2015

Consumption of methane and CO2 by methanotrophic microbial mats from gas seeps of the anoxic Black Sea

artículo científico publicado en 2007

Convergent evolution of unusual complex I homologs with increased proton pumping capacity: energetic and ecological implications

scientific article published in 2018

Deep-biosphere methane production stimulated by geofluids in the Nankai accretionary complex.

artículo científico publicado en 2018

Deep-sea archaea fix and share nitrogen in methane-consuming microbial consortia

artículo científico publicado en 2009

DeepSee: Multidimensional Visualizations of Seabed Ecosystems

artículo científico publicado en 2024

Detection of Protein-Synthesizing Microorganisms in the Environment via Bioorthogonal Noncanonical Amino Acid Tagging (BONCAT)

Dimorphism in methane seep-dwelling ecotypes of the largest known bacteria

artículo científico publicado en 2011

Distributions of putative aerobic methanotrophs in diverse pelagic marine environments

artículo científico publicado en 2010

Divergent methyl-coenzyme M reductase genes in a deep-subseafloor Archaeoglobi

scientific article published on 16 January 2019

Diverse syntrophic partnerships from deep-sea methane vents revealed by direct cell capture and metagenomics

artículo científico publicado en 2008

Early impacts of climate change on a coastal marine microbial mat ecosystem

artículo científico publicado en 2022

Erratum for Skennerton et al., "Methane-Fueled Syntrophy through Extracellular Electron Transfer: Uncovering the Genomic Traits Conserved within Diverse Bacterial Partners of Anaerobic Methanotrophic Archaea".

artículo científico publicado en 2017

Evolutionary innovation: a bone-eating marine symbiosis

artículo científico publicado en 2005

Experimentally-validated correlation analysis reveals new anaerobic methane oxidation partnerships with consortium-level heterogeneity in diazotrophy

scientific article published on 15 October 2020

Exploration of Subseafloor Life and the Biosphere Through IODP (2003–2013)

Extensive carbon isotopic heterogeneity among methane seep microbiota.

artículo científico publicado en 2009

Fish-Sims: Characterizing the Metabolic Potential and Interspecies Interactions between Uncultured Environmental Microorganisms

Genomic Reconstruction of an Uncultured Hydrothermal Vent Gammaproteobacterial Methanotroph (Family Methylothermaceae) Indicates Multiple Adaptations to Oxygen Limitation

artículo científico publicado en 2015

Geochemical, metagenomic and metaproteomic insights into trace metal utilization by methane-oxidizing microbial consortia in sulphidic marine sediments.

artículo científico publicado en 2013

Global Molecular Analyses of Methane Metabolism in Methanotrophic Alphaproteobacterium, Methylosinus trichosporium OB3b. Part II. Metabolomics and 13C-Labeling Study

artículo científico publicado en 2013

Growth and methane oxidation rates of anaerobic methanotrophic archaea in a continuous-flow bioreactor

artículo científico publicado en 2003

Heavy water and (15) N labelling with NanoSIMS analysis reveals growth rate-dependent metabolic heterogeneity in chemostats

artículo científico publicado en 2015

Hydrogen for dinner

scientific article published in Nature

Identification of diazotrophic microorganisms in marine sediment via fluorescence in situ hybridization coupled to nanoscale secondary ion mass spectrometry (FISH-NanoSIMS).

artículo científico publicado en 2011

In situ visualization of newly synthesized proteins in environmental microbes using amino acid tagging and click chemistry.

artículo científico publicado en 2014

Interrogating marine virus-host interactions and elemental transfer with BONCAT and nanoSIMS-based methods.

artículo científico publicado en 2017

Iron oxides stimulate sulfate-driven anaerobic methane oxidation in seeps

artículo científico publicado en 2014

Manganese- and iron-dependent marine methane oxidation

artículo científico publicado en 2009

Measurement of rare isotopologues of nitrous oxide by high-resolution multi-collector mass spectrometry

artículo científico publicado en 2016

Members of the methanotrophic genus Methylomarinum inhabit inland mud pots

artículo científico publicado en 2016

Metabolic associations with archaea drive shifts in hydrogen isotope fractionation in sulfate-reducing bacterial lipids in cocultures and methane seeps.

artículo científico publicado en 2015

Metabolic marker gene mining provides insight in global diversity and, coupled with targeted genome reconstruction, sheds further light on metabolic potential of the

article

Metabolic marker gene mining provides insight in global mcrA diversity and, coupled with targeted genome reconstruction, sheds light on metabolic versatility of the Methanomassiliicoccales

article

Methane Seep Carbonates Host Distinct, Diverse, and Dynamic Microbial Assemblages.

artículo científico publicado en 2015

Methane metabolism in the archaeal phylum Bathyarchaeota revealed by genome-centric metagenomics.

artículo científico publicado en 2015

Methane on Mars and Habitability: Challenges and Responses

article

Methane-Consuming Archaea Revealed by Directly Coupled Isotopic and Phylogenetic Analysis

artículo científico publicado en 2001

Methane-Fueled Syntrophy through Extracellular Electron Transfer: Uncovering the Genomic Traits Conserved within Diverse Bacterial Partners of Anaerobic Methanotrophic Archaea

artículo científico publicado en 2017

Methanotrophic bacterial symbionts fuel dense populations of deep-sea feather duster worms (Sabellida, Annelida) and extend the spatial influence of methane seepage

artículo científico publicado en 2020

Method for Assessing Mineral Composition-Dependent Patterns in Microbial Diversity Using Magnetic and Density Separation

article

Methods for unveiling cryptic microbial partnerships in nature

artículo científico publicado en 2009

Methyl sulfides as intermediates in the anaerobic oxidation of methane

artículo científico publicado en 2007

Methyl-compound use and slow growth characterize microbial life in 2-km-deep subseafloor coal and shale beds

artículo científico publicado en 2017

Methyloprofundus sedimenti gen. nov., sp. nov., an obligate methanotroph from ocean sediment belonging to the 'deep sea-1' clade of marine methanotrophs.

artículo científico publicado en 2014

Microbial abundance and diversity patterns associated with sediments and carbonates from the methane seep environments of Hydrate Ridge, OR

Microbial communities of Auka hydrothermal sediments shed light on vent biogeography and the evolutionary history of thermophily

artículo científico publicado en 2022

Microbial eukaryotic distributions and diversity patterns in a deep-sea methane seep ecosystem

artículo científico publicado en 2015

Microbial interactions in the anaerobic oxidation of methane: model simulations constrained by process rates and activity patterns

artículo científico publicado en 2019

Micron-scale mapping of sulfur cycling across the oxycline of a cyanobacterial mat: a paired nanoSIMS and CARD-FISH approach

artículo científico publicado en 2008

Microscale sulfur cycling in the phototrophic pink berry consortia of the Sippewissett Salt Marsh

artículo científico publicado en 2014

Microsporidia-nematode associations in methane seeps reveal basal fungal parasitism in the deep sea.

artículo científico publicado en 2014

Molecular Biology's Contributions to Geobiology

Molecular and isotopic analysis of anaerobic methane-oxidizing communities in marine sediments

Monodeuterated Methane, an Isotopic Tool To Assess Biological Methane Metabolism Rates

artículo científico publicado en 2017

Multicellular photo-magnetotactic bacteria.

artículo científico publicado en 2010

Multiple archaeal groups mediate methane oxidation in anoxic cold seep sediments

artículo científico publicado en 2002

NanoSIMS imaging reveals metabolic stratification within current-producing biofilms

scientific article published on 23 September 2019

Nitrate-based niche differentiation by distinct sulfate-reducing bacteria involved in the anaerobic oxidation of methane

artículo científico publicado en 2013

Novel forms of structural integration between microbes and a hydrothermal vent gastropod from the Indian Ocean

artículo científico publicado en 2004

Patterns of 15N assimilation and growth of methanotrophic ANME-2 archaea and sulfate-reducing bacteria within structured syntrophic consortia revealed by FISH-SIMS.

artículo científico publicado en 2009

Peptidoglycan Production by an Insect-Bacterial Mosaic

scientific article published on 03 October 2019

Phylogenomic analysis of Candidatus 'Izimaplasma' species: free-living representatives from a Tenericutes clade found in methane seeps

artículo científico publicado en 2016

Planktonic and sediment-associated aerobic methanotrophs in two seep systems along the North American margin

artículo científico publicado en 2008

Polyphosphate storage during sporulation in the gram-negative bacterium Acetonema longum.

artículo científico publicado en 2013

Proteomic Stable Isotope Probing Reveals Biosynthesis Dynamics of Slow Growing Methane Based Microbial Communities

artículo científico publicado en 2016

Pseudofossils in relict methane seep carbonates resemble endemic microbial consortia

scholarly article by Jake V. Bailey published in January 2010

Quantification and isotopic analysis of intracellular sulfur metabolites in the dissimilatory sulfate reduction pathway

scholarly article

Rapid quantification and isotopic analysis of dissolved sulfur species.

artículo científico publicado en 2017

Role of APS reductase in biogeochemical sulfur isotope fractionation

artículo científico publicado en 2019

Scientists' warning to humanity: microorganisms and climate change

scientific article published on 18 June 2019

Single cell activity reveals direct electron transfer in methanotrophic consortia

artículo científico publicado en 2015

Spatial distribution of nitrogen fixation in methane seep sediment and the role of the ANME archaea

artículo científico publicado en 2013

Spatial variability in photosynthetic and heterotrophic activity drives localized δ13C org fluctuations and carbonate precipitation in hypersaline microbial mats.

artículo científico publicado en 2014

Stable Isotope Phenotyping via Cluster Analysis of NanoSIMS Data As a Method for Characterizing Distinct Microbial Ecophysiologies and Sulfur-Cycling in the Environment

artículo científico publicado en 2016

Starvation and recovery in the deep-sea methanotroph Methyloprofundus sedimenti

artículo científico publicado en 2016

Subgroup characteristics of marine methane-oxidizing ANME-2 archaea and their syntrophic partners revealed by integrated multimodal analytical microscopy. ⬇️

artículo científico publicado en 2018

Subnanogram proteomics: impact of LC column selection, MS instrumentation and data analysis strategy on proteome coverage for trace samples.

artículo científico publicado en 2017

Syntrophic interactions and mechanisms underpinning anaerobic methane oxidation: targeted metaproteogenomics, single-cell protein detection and quantitative isotope imaging of microbial consortia

Systems Level Dissection of Anaerobic Methane Cycling: Quantitative Measurements of Single Cell Ecophysiology, Genetic Mechanisms, and Microbial Interactions

article

Systems level insights into alternate methane cycling modes in a freshwater lake via community transcriptomics, metabolomics and nano-SIMS analysis

article

Temporal evolution of methane cycling and phylogenetic diversity of archaea in sediments from a deep-sea whale-fall in Monterey Canyon, California

artículo científico publicado en 2008

The Apparent Involvement of ANMEs in Mineral Dependent Methane Oxidation, as an Analog for Possible Martian Methanotrophy

artículo científico publicado en 2011

The Cell and the Sum of Its Parts: Patterns of Complexity in Biosignatures as Revealed by Deep UV Raman Spectroscopy

artículo científico publicado en 2019

The effect of sulfate concentration on (sub)millimeter-scale sulfide δ34S in hypersaline cyanobacterial mats over the diurnal cycle

artículo científico publicado en 2009

The gut of the finch: uniqueness of the gut microbiome of the Galápagos vampire finch

artículo científico publicado en 2018

The potential for biologically catalyzed anaerobic methane oxidation on ancient Mars

artículo científico

Trace Metal Imaging of Sulfate-Reducing Bacteria and Methanogenic Archaea at Single-Cell Resolution by Synchrotron X-Ray Fluorescence Imaging

Trace incorporation of heavy water reveals slow and heterogeneous pathogen growth rates in cystic fibrosis sputum

artículo científico publicado en 2015

Trace metal imaging of sulfate-reducing bacteria and methanogenic archaea at single-cell resolution by synchrotron X-ray fluorescence imaging

Trace metal requirements for microbial enzymes involved in the production and consumption of methane and nitrous oxide

artículo científico publicado en 2012

Variations in archaeal and bacterial diversity associated with the sulfate-methane transition zone in continental margin sediments (Santa Barbara Basin, California).

artículo científico publicado en 2009

Visualizing in situ translational activity for identifying and sorting slow-growing archaeal-bacterial consortia

artículo científico publicado en 2016

Whole cell immunomagnetic enrichment of environmental microbial consortia using rRNA-targeted Magneto-FISH.

artículo científico publicado en 2013

Widespread nitrogen fixation in sediments from diverse deep-sea sites of elevated carbon loading

artículo científico publicado en 2018

Lista de obras de Victoria Orphan

A chemosynthetic ecotone—“chemotone”—in the sediments surrounding deep‐sea methane seeps

A hydrothermal seep on the Costa Rica margin: middle ground in a continuum of reducing ecosystems

A novel family of functional operons encoding methane/ammonia monooxygenase-related proteins in gammaproteobacterial methanotrophs

A novel sister clade to the enterobacteria microviruses (family Microviridae) identified in methane seep sediments

Abundance and distribution of diverse membrane-bound monooxygenase (Cu-MMO) genes within the Costa Rica oxygen minimum zone

Active sulfur cycling by diverse mesophilic and thermophilic microorganisms in terrestrial mud volcanoes of Azerbaijan.

Activity and interactions of methane seep microorganisms assessed by parallel transcription and FISH-NanoSIMS analyses

Age Mosaicism across Multiple Scales in Adult Tissues

Anaerobic methane oxidation coupled to manganese reduction by members of the Methanoperedenaceae

Archaea in metazoan diets: implications for food webs and biogeochemical cycling

Artificial electron acceptors decouple archaeal methane oxidation from sulfate reduction.

Authigenic carbonate formation at hydrocarbon seeps in continental margin sediments: A comparative study

Autoendoliths: a distinct type of rock-hosted microbial life

Autonomous application of quantitative PCR in the deep sea: in situ surveys of aerobic methanotrophs using the deep-sea environmental sample processor

Autotrophic and heterotrophic acquisition of carbon and nitrogen by a mixotrophic chrysophyte established through stable isotope analysis

Bacterial community shifts in taxa and diversity in response to localized organic loading in the deep sea

CULTIVATION, IN SITU MEASUREMENTS, AND GEOCHEMICAL TECHNIQUES FOR GEOMICROBIOLOGICAL STUDIES

Carbon isotopic heterogeneity of coenzyme F430 and membrane lipids in methane-oxidizing archaea

Carbonate-hosted methanotrophy represents an unrecognized methane sink in the deep sea.

Characterization of Chemosynthetic Microbial Mats Associated with Intertidal Hydrothermal Sulfur Vents in White Point, San Pedro, CA, USA.

Characterization of microbial associations with methanotrophic archaea and sulfate-reducing bacteria through statistical comparison of nested Magneto-FISH enrichments

Chemotrophic microbial mats and their potential for preservation in the rock record.

Classifying the metal dependence of uncharacterized nitrogenases

Colonial Tube-Dwelling Ciliates Influence Methane Cycling and Microbial Diversity within Methane Seep Ecosystems

Comparative Genomics and Proteomic Analysis of Assimilatory Sulfate Reduction Pathways in Anaerobic Methanotrophic Archaea

Comparative analysis of methane-oxidizing archaea and sulfate-reducing bacteria in anoxic marine sediments.

Comparative genomics reveals electron transfer and syntrophic mechanisms differentiating methanotrophic and methanogenic archaea

Comparison of Archaeal and Bacterial Diversity in Methane Seep Carbonate Nodules and Host Sediments, Eel River Basin and Hydrate Ridge, USA.

Consumption of methane and CO2 by methanotrophic microbial mats from gas seeps of the anoxic Black Sea

Convergent evolution of unusual complex I homologs with increased proton pumping capacity: energetic and ecological implications

Deep-biosphere methane production stimulated by geofluids in the Nankai accretionary complex.

Deep-sea archaea fix and share nitrogen in methane-consuming microbial consortia

DeepSee: Multidimensional Visualizations of Seabed Ecosystems

Detection of Protein-Synthesizing Microorganisms in the Environment via Bioorthogonal Noncanonical Amino Acid Tagging (BONCAT)

Dimorphism in methane seep-dwelling ecotypes of the largest known bacteria

Distributions of putative aerobic methanotrophs in diverse pelagic marine environments

Divergent methyl-coenzyme M reductase genes in a deep-subseafloor Archaeoglobi

Diverse syntrophic partnerships from deep-sea methane vents revealed by direct cell capture and metagenomics

Early impacts of climate change on a coastal marine microbial mat ecosystem

Erratum for Skennerton et al., "Methane-Fueled Syntrophy through Extracellular Electron Transfer: Uncovering the Genomic Traits Conserved within Diverse Bacterial Partners of Anaerobic Methanotrophic Archaea".

Evolutionary innovation: a bone-eating marine symbiosis

Experimentally-validated correlation analysis reveals new anaerobic methane oxidation partnerships with consortium-level heterogeneity in diazotrophy

Exploration of Subseafloor Life and the Biosphere Through IODP (2003–2013)

Extensive carbon isotopic heterogeneity among methane seep microbiota.

Fish-Sims: Characterizing the Metabolic Potential and Interspecies Interactions between Uncultured Environmental Microorganisms

Genomic Reconstruction of an Uncultured Hydrothermal Vent Gammaproteobacterial Methanotroph (Family Methylothermaceae) Indicates Multiple Adaptations to Oxygen Limitation

Geochemical, metagenomic and metaproteomic insights into trace metal utilization by methane-oxidizing microbial consortia in sulphidic marine sediments.

Global Molecular Analyses of Methane Metabolism in Methanotrophic Alphaproteobacterium, Methylosinus trichosporium OB3b. Part II. Metabolomics and 13C-Labeling Study

Growth and methane oxidation rates of anaerobic methanotrophic archaea in a continuous-flow bioreactor

Heavy water and (15) N labelling with NanoSIMS analysis reveals growth rate-dependent metabolic heterogeneity in chemostats

Hydrogen for dinner

Identification of diazotrophic microorganisms in marine sediment via fluorescence in situ hybridization coupled to nanoscale secondary ion mass spectrometry (FISH-NanoSIMS).

In situ visualization of newly synthesized proteins in environmental microbes using amino acid tagging and click chemistry.

Interrogating marine virus-host interactions and elemental transfer with BONCAT and nanoSIMS-based methods.

Iron oxides stimulate sulfate-driven anaerobic methane oxidation in seeps

Manganese- and iron-dependent marine methane oxidation

Measurement of rare isotopologues of nitrous oxide by high-resolution multi-collector mass spectrometry

Members of the methanotrophic genus Methylomarinum inhabit inland mud pots

Metabolic associations with archaea drive shifts in hydrogen isotope fractionation in sulfate-reducing bacterial lipids in cocultures and methane seeps.

Metabolic marker gene mining provides insight in global diversity and, coupled with targeted genome reconstruction, sheds further light on metabolic potential of the

Metabolic marker gene mining provides insight in global mcrA diversity and, coupled with targeted genome reconstruction, sheds light on metabolic versatility of the Methanomassiliicoccales

Methane Seep Carbonates Host Distinct, Diverse, and Dynamic Microbial Assemblages.

Methane metabolism in the archaeal phylum Bathyarchaeota revealed by genome-centric metagenomics.

Methane on Mars and Habitability: Challenges and Responses

Methane-Consuming Archaea Revealed by Directly Coupled Isotopic and Phylogenetic Analysis

Methane-Fueled Syntrophy through Extracellular Electron Transfer: Uncovering the Genomic Traits Conserved within Diverse Bacterial Partners of Anaerobic Methanotrophic Archaea

Methanotrophic bacterial symbionts fuel dense populations of deep-sea feather duster worms (Sabellida, Annelida) and extend the spatial influence of methane seepage

Method for Assessing Mineral Composition-Dependent Patterns in Microbial Diversity Using Magnetic and Density Separation

Methods for unveiling cryptic microbial partnerships in nature

Methyl sulfides as intermediates in the anaerobic oxidation of methane

Methyl-compound use and slow growth characterize microbial life in 2-km-deep subseafloor coal and shale beds

Methyloprofundus sedimenti gen. nov., sp. nov., an obligate methanotroph from ocean sediment belonging to the 'deep sea-1' clade of marine methanotrophs.

Microbial abundance and diversity patterns associated with sediments and carbonates from the methane seep environments of Hydrate Ridge, OR

Microbial communities of Auka hydrothermal sediments shed light on vent biogeography and the evolutionary history of thermophily

Microbial eukaryotic distributions and diversity patterns in a deep-sea methane seep ecosystem

Microbial interactions in the anaerobic oxidation of methane: model simulations constrained by process rates and activity patterns

Micron-scale mapping of sulfur cycling across the oxycline of a cyanobacterial mat: a paired nanoSIMS and CARD-FISH approach

Microscale sulfur cycling in the phototrophic pink berry consortia of the Sippewissett Salt Marsh

Microsporidia-nematode associations in methane seeps reveal basal fungal parasitism in the deep sea.