Lista de obras - Suhua Shi - Dominio Público Uruguay

A Natural Hybrid Between Ligularia paradoxa and L. duciformis (Asteraceae, Senecioneae) From Yunnan, China1

artículo científico publicado en 2008

A case for conservation

artículo científico publicado en 2004

Adaptation to a new environment with pre‐adaptive genomic features – Evidence from woody plants colonizing the land–sea interface

artículo científico publicado en 2022

Adverse interactions between micro-RNAs and target genes from different species

artículo científico publicado en 2010

Ancient Geographical Barriers Drive Differentiation among Sonneratia caseolaris Populations and Recent Divergence from S. lanceolata

artículo científico publicado en 2016

Applications of Multiple Nuclear Genes to the Molecular Phylogeny, Population Genetics and Hybrid Identification in the Mangrove Genus Rhizophora

artículo científico publicado en 2015

Can genomic data alone tell us whether speciation happened with gene flow?

artículo científico publicado en 2017

Coevolution in action: disruptive selection on egg colour in an avian brood parasite and its host

artículo científico publicado en 2010

Comparative Analysis of Transcriptomes in Rhizophoraceae Provides Insights into the Origin and Adaptive Evolution of Mangrove Plants in Intertidal Environments

artículo científico publicado en 2017

Comparative transcriptome analyses of a mangrove tree Sonneratia caseolaris and its non-mangrove relatives, Trapa bispinosa and Duabanga grandiflora

artículo científico

Comparisons of site- and haplotype-frequency methods for detecting positive selection

artículo científico publicado en 2007

Compound tests for the detection of hitchhiking under positive selection

artículo científico publicado en 2007

Conservation genetics of Lumnitzera littorea (Combretaceae), an endangered mangrove, from the Indo-West Pacific

article

Construction of a SSH library of Aegiceras corniculatum under salt stress and expression analysis of four transcripts

article published in 2005

Convergent adaptation of the genomes of woody plants at the land-sea interface

artículo científico publicado en 2020

Convergent adaptive evolution in marginal environments: unloading transposable elements as a common strategy among mangrove genomes

artículo científico publicado en 2017

DNA barcoding reveals insect diversity in the mangrove ecosystems of the Hainan Island, China

article

De Novo Assembly of Coding Sequences of the Mangrove Palm (Nypa fruticans) Using RNA-Seq and Discovery of Whole-Genome Duplications in the Ancestor of Palms

artículo científico publicado en 2015

De novo assembly of the transcriptome of Aegiceras corniculatum, a mangrove species in the Indo-West Pacific region

artículo científico

De novo assembly of the transcriptomes of two yellow mangroves, Ceriops tagal and C. zippeliana, and one of their terrestrial relatives, Pellacalyx yunnanensis.

artículo científico

Detecting evolutionary rate heterogeneity among mangroves and their close terrestrial relatives

scholarly article by Yang Zhong et al published May 2002 in Ecology Letters

Development and characterization of 18 EST–SSR markers in Sonneratia caseolaris ⬇️

artículo científico publicado el 4 de abril de 2011

Development and characterization of EST-SSR markers in the invasive weed Mikania micrantha (Asteraceae).

artículo científico publicado en 2010

Development and characterization of microsatellite loci for smooth cordgrass, Spartina alterniflora (Poaceae) ⬇️

artículo científico publicado en 2013

Development and characterization of microsatellite markers for Melastoma dodecandrum (Melastomataceae).

artículo científico publicado en 2013

Development of microsatellite markers for Carallia brachiata (Rhizophoraceae)

artículo científico publicado en 2015

Differentiated population structure of a genetically depauperate mangrove species Ceriops tagal revealed by both Sanger and deep sequencing

scholarly article by Yelin Huang et al published August 2012 in Aquatic Botany

Differing phylogeographic patterns within the Indo-West Pacific mangrove genus Xylocarpus (Meliaceae)

scholarly article by Zixiao Guo et al published 27 December 2017 in Journal of Biogeography

Effects of Pleistocene sea-level fluctuations on mangrove population dynamics: a lesson from Sonneratia alba

artículo científico publicado en 2017

Electroacupuncture Treatment Improves Learning-Memory Ability and Brain Glucose Metabolism in a Mouse Model of Alzheimer's Disease: Using Morris Water Maze and Micro-PET.

artículo científico publicado en 2015

Establishing community-wide DNA barcode references for conserving mangrove forests in China

scientific article published on 04 December 2021

Estimating DNA polymorphism from next generation sequencing data with high error rate by dual sequencing applications

artículo científico publicado en 2013

Evidence for gene length as a determinant of gene coexpression in protein complexes

artículo científico publicado en 2009

Evolution of coastal forests based on a full set of mangrove genomes

artículo científico publicado en 2022

Evolution of woody plants to the land‐sea interface – The atypical genomic features of mangroves with atypical phenotypic adaptation

artículo científico publicado en 2022

Expression Variations of miRNAs and mRNAs in Rice (Oryza sativa)

artículo científico publicado en 2016

Extremely low genetic diversity across mangrove taxa reflects past sea level changes and hints at poor future responses.

artículo científico publicado en 2017

Extremely low genetic diversity and extensive genetic admixture at the northern range margins of Bombax ceiba

artículo científico publicado en 2015

Flooding greatly affects the diversity of arbuscular mycorrhizal fungi communities in the roots of wetland plants.

artículo científico publicado en 2011

Genetic discontinuities in a dominant mangrove Rhizophora apiculata (Rhizophoraceae) in the Indo-Malesian region

scholarly article by Zixiao Guo et al published 20 April 2016 in Journal of Biogeography

Genetic diversity in Primula obconica (Primulaceae) from central and south-west China as revealed by ISSR markers

artículo científico publicado en 2003

Genetic diversity of Aegiceras corniculatum (Myrsinaceae) revealed by amplified fragment length polymorphism (AFLP)

Genetic diversity of Hibiscus tiliaceus (Malvaceae) in China assessed using AFLP markers

artículo científico publicado en 2003

Genetic diversity of the endangered Chinese endemic herb Primulina tabacum (Gesneriaceae) revealed by amplified fragment length polymorphism (AFLP).

artículo científico publicado en 2006

Genetic variation in central and peripheral populations of Excoecaria agallocha from Indo-West Pacific

Genome-Wide Convergence during Evolution of Mangroves from Woody Plants.

artículo científico publicado en 2017

Genomic Convergence in the Adaptation to Extreme Environments

artículo científico publicado en 2020

Genomic variation in rice: genesis of highly polymorphic linkage blocks during domestication

artículo científico publicado en 2006

Habitat differentiation between estuarine and inland Hibiscus tiliaceus L. (Malvaceae) as revealed by retrotransposon-based SSAP marker

artículo científico publicado en 2011

High-throughput S-SAP by fluorescent multiplex PCR and capillary electrophoresis in plants.

artículo científico publicado en 2004

Hybridization with natives augments the threats of introduced species in Sonneratia mangroves

scientific article published on 17 October 2019

Identification and characterization of evolutionarily conserved alternative splicing events in a mangrove genus Sonneratia.

artículo científico publicado en 2018

Independent losses of function in a polyphenol oxidase in rice: differentiation in grain discoloration between subspecies and the role of positive selection under domestication

artículo científico publicado en 2008

JMJ24 binds to RDR2 and is required for the basal level transcription of silenced loci in Arabidopsis

artículo científico publicado en 2015

MapNext: a software tool for spliced and unspliced alignments and SNP detection of short sequence reads

artículo científico publicado en 2009

MapView: visualization of short reads alignment on a desktop computer

artículo científico publicado en 2009

Molecular adaptation to salinity fluctuation in tropical intertidal environments of a mangrove tree Sonneratia alba

scientific article published on 22 April 2020

Molecular confirmation of natural hybridization between Lumnitzera racemosa and Lumnitzera littorea

Molecular criteria for determining new hybrid species--an application to the Sonneratia hybrids

artículo científico publicado en 2005

Molecular evidence for natural hybridization in the mangrove fern genus Acrostichum

artículo científico publicado en 2013

Molecular evidence for natural intergeneric hybridization between Liquidambar and Altingia

article

Molecular genetic variation in Chinese populations of three subspecies of Hippophae rhamnoides

artículo científico publicado en 2004

Molecular phylogenetic analysis of mangroves: independent evolutionary origins of vivipary and salt secretion

artículo científico publicado en 2005

PCR-mediated recombination of the amplification products of the Hibiscus tiliaceus cytosolic glyceraldehyde-3-phosphate dehydrogenase gene

artículo científico publicado en 2007

Packera serpenticola (Asteraceae; Senecioneae), a New Species from North Carolina, U. S. A.

artículo científico publicado en 2014

Phylogenetic relationships of Combretoideae (Combretaceae) inferred from plastid, nuclear gene and spacer sequences

artículo científico publicado en 2002

Phylogenetic relationships of the Rhizophoraceae in China based on sequences of the chloroplast gene matK and the internal transcribed spacer regions of nuclear ribosomal DNA and combined data set

article

Phylogeny and infrageneric classification ofSymplocos(Symplocaceae) inferred from DNA sequence data ⬇️

artículo científico publicado el 1 de noviembre de 2004

Population Genetics in Nonmodel Organisms: II. Natural Selection in Marginal Habitats Revealed by Deep Sequencing on Dual Platforms

article

Population genetic structure and conservation implications of Ceriops decandra in Malay Peninsula and North Australia

article

Population genetic structure of three tree species in the mangrove genus Ceriops (Rhizophoraceae) from the Indo West Pacific

artículo científico publicado en 2007

Population genetics of speciation in nonmodel organisms: I. Ancestral polymorphism in mangroves

artículo científico publicado en 2007

Prevalence of cryptic species in morphologically uniform taxa - Fast speciation and evolutionary radiation in Asian frogs

article

Pronounced genetic differentiation and recent secondary contact in the mangrove tree Lumnitzera racemosa revealed by population genomic analyses

artículo científico publicado en 2016

Rapid growth of a hepatocellular carcinoma and the driving mutations revealed by cell-population genetic analysis of whole-genome data

artículo científico publicado en 2011

Re-Evaluation of Phylogenetic Relationships among Species of the Mangrove Genus Avicennia from Indo-West Pacific Based on Multilocus Analyses

artículo científico publicado en 2016

Recent advances in the study of ecological speciation

artículo científico publicado en 2015

Sharing and reporting benefits from biodiversity research

artículo científico publicado en 2020

Small RNA transcriptomes of mangroves evolve adaptively in extreme environments

artículo científico publicado en 2016

Speciation with gene flow via cycles of isolation and migration: insights from multiple mangrove taxa

scientific article published on 24 July 2018

Statistical tests for detecting positive selection by utilizing high-frequency variants

artículo científico publicado en 2006

Testing a hypothesis of unidirectional hybridization in plants: observations on Sonneratia, Bruguiera and Ligularia

artículo científico publicado en 2008

Testing hypotheses on the rate of molecular evolution in relation to gene expression using microRNAs ⬇️

artículo científico publicado el 12 de septiembre de 2011

Testing relative evolutionary rates and estimating divergence times among six genera of Rhizophoraceae using cpDNA and nrDNA sequences

article

The State of the World's Mangrove Forests: Past, Present, and Future

artículo científico publicado en 2019

The accumulation of deleterious mutations in rice genomes: a hypothesis on the cost of domestication

artículo científico publicado en 2006

The emergence of the hyperinvasive vine, Mikania micrantha (Asteraceae), via admixture and founder events inferred from population transcriptomics

artículo científico publicado en 2017

The global significance of biodiversity science in China: an overview

artículo científico

The global significance of biodiversity science in China: an overview

artículo científico

The integration and application of genomic information in mangrove conservation

scientific article published on 25 September 2018

The origin, diversification and adaptation of a major mangrove clade (Rhizophoreae) revealed by whole genome sequencing

artículo científico publicado en 2017

Transcriptional homeostasis of a mangrove species, Ceriops tagal, in saline environments, as revealed by microarray analysis

artículo científico publicado en 2012

Transcriptome analyses provide insights into the phylogeny and adaptive evolution of the mangrove fern genus Acrostichum

artículo científico publicado en 2016

Transcriptome analysis of the Holly mangrove Acanthus ilicifolius and its terrestrial relative, Acanthus leucostachyus, provides insights into adaptation to intertidal zones

artículo científico publicado en 2015

Transcriptome sequencing of a highly salt tolerant mangrove species Sonneratia alba using Illumina platform ⬇️

artículo científico publicado el 19 de abril de 2011

Two evolutionary histories in the genome of rice: the roles of domestication genes

artículo científico publicado en 2011

miREvo: an integrative microRNA evolutionary analysis platform for next-generation sequencing experiments

artículo científico publicado en 2012

Lista de obras de Suhua Shi

A Natural Hybrid Between Ligularia paradoxa and L. duciformis (Asteraceae, Senecioneae) From Yunnan, China1

A case for conservation

Adaptation to a new environment with pre‐adaptive genomic features – Evidence from woody plants colonizing the land–sea interface

Adverse interactions between micro-RNAs and target genes from different species

Ancient Geographical Barriers Drive Differentiation among Sonneratia caseolaris Populations and Recent Divergence from S. lanceolata

Applications of Multiple Nuclear Genes to the Molecular Phylogeny, Population Genetics and Hybrid Identification in the Mangrove Genus Rhizophora

Can genomic data alone tell us whether speciation happened with gene flow?

Coevolution in action: disruptive selection on egg colour in an avian brood parasite and its host

Comparative Analysis of Transcriptomes in Rhizophoraceae Provides Insights into the Origin and Adaptive Evolution of Mangrove Plants in Intertidal Environments

Comparative transcriptome analyses of a mangrove tree Sonneratia caseolaris and its non-mangrove relatives, Trapa bispinosa and Duabanga grandiflora

Comparisons of site- and haplotype-frequency methods for detecting positive selection

Compound tests for the detection of hitchhiking under positive selection

Conservation genetics of Lumnitzera littorea (Combretaceae), an endangered mangrove, from the Indo-West Pacific

Construction of a SSH library of Aegiceras corniculatum under salt stress and expression analysis of four transcripts

Convergent adaptation of the genomes of woody plants at the land-sea interface

Convergent adaptive evolution in marginal environments: unloading transposable elements as a common strategy among mangrove genomes

DNA barcoding reveals insect diversity in the mangrove ecosystems of the Hainan Island, China

De Novo Assembly of Coding Sequences of the Mangrove Palm (Nypa fruticans) Using RNA-Seq and Discovery of Whole-Genome Duplications in the Ancestor of Palms

De novo assembly of the transcriptome of Aegiceras corniculatum, a mangrove species in the Indo-West Pacific region

De novo assembly of the transcriptomes of two yellow mangroves, Ceriops tagal and C. zippeliana, and one of their terrestrial relatives, Pellacalyx yunnanensis.

Detecting evolutionary rate heterogeneity among mangroves and their close terrestrial relatives

Development and characterization of 18 EST–SSR markers in Sonneratia caseolaris ⬇️

Development and characterization of EST-SSR markers in the invasive weed Mikania micrantha (Asteraceae).

Development and characterization of microsatellite loci for smooth cordgrass, Spartina alterniflora (Poaceae) ⬇️

Development and characterization of microsatellite markers for Melastoma dodecandrum (Melastomataceae).

Development of microsatellite markers for Carallia brachiata (Rhizophoraceae)

Differentiated population structure of a genetically depauperate mangrove species Ceriops tagal revealed by both Sanger and deep sequencing

Differing phylogeographic patterns within the Indo-West Pacific mangrove genus Xylocarpus (Meliaceae)

Effects of Pleistocene sea-level fluctuations on mangrove population dynamics: a lesson from Sonneratia alba

Electroacupuncture Treatment Improves Learning-Memory Ability and Brain Glucose Metabolism in a Mouse Model of Alzheimer's Disease: Using Morris Water Maze and Micro-PET.

Establishing community-wide DNA barcode references for conserving mangrove forests in China

Estimating DNA polymorphism from next generation sequencing data with high error rate by dual sequencing applications

Evidence for gene length as a determinant of gene coexpression in protein complexes

Evolution of coastal forests based on a full set of mangrove genomes

Evolution of woody plants to the land‐sea interface – The atypical genomic features of mangroves with atypical phenotypic adaptation

Expression Variations of miRNAs and mRNAs in Rice (Oryza sativa)

Extremely low genetic diversity across mangrove taxa reflects past sea level changes and hints at poor future responses.

Extremely low genetic diversity and extensive genetic admixture at the northern range margins of Bombax ceiba

Flooding greatly affects the diversity of arbuscular mycorrhizal fungi communities in the roots of wetland plants.

Genetic discontinuities in a dominant mangrove Rhizophora apiculata (Rhizophoraceae) in the Indo-Malesian region

Genetic diversity in Primula obconica (Primulaceae) from central and south-west China as revealed by ISSR markers

Genetic diversity of Aegiceras corniculatum (Myrsinaceae) revealed by amplified fragment length polymorphism (AFLP)

Genetic diversity of Hibiscus tiliaceus (Malvaceae) in China assessed using AFLP markers

Genetic diversity of the endangered Chinese endemic herb Primulina tabacum (Gesneriaceae) revealed by amplified fragment length polymorphism (AFLP).

Genetic variation in central and peripheral populations of Excoecaria agallocha from Indo-West Pacific

Genome-Wide Convergence during Evolution of Mangroves from Woody Plants.

Genomic Convergence in the Adaptation to Extreme Environments

Genomic variation in rice: genesis of highly polymorphic linkage blocks during domestication

Habitat differentiation between estuarine and inland Hibiscus tiliaceus L. (Malvaceae) as revealed by retrotransposon-based SSAP marker

High-throughput S-SAP by fluorescent multiplex PCR and capillary electrophoresis in plants.

Hybridization with natives augments the threats of introduced species in Sonneratia mangroves

Identification and characterization of evolutionarily conserved alternative splicing events in a mangrove genus Sonneratia.

Independent losses of function in a polyphenol oxidase in rice: differentiation in grain discoloration between subspecies and the role of positive selection under domestication

JMJ24 binds to RDR2 and is required for the basal level transcription of silenced loci in Arabidopsis

MapNext: a software tool for spliced and unspliced alignments and SNP detection of short sequence reads

MapView: visualization of short reads alignment on a desktop computer

Molecular adaptation to salinity fluctuation in tropical intertidal environments of a mangrove tree Sonneratia alba

Molecular confirmation of natural hybridization between Lumnitzera racemosa and Lumnitzera littorea

Molecular criteria for determining new hybrid species--an application to the Sonneratia hybrids

Molecular evidence for natural hybridization in the mangrove fern genus Acrostichum

Molecular evidence for natural intergeneric hybridization between Liquidambar and Altingia

Molecular genetic variation in Chinese populations of three subspecies of Hippophae rhamnoides

Molecular phylogenetic analysis of mangroves: independent evolutionary origins of vivipary and salt secretion

PCR-mediated recombination of the amplification products of the Hibiscus tiliaceus cytosolic glyceraldehyde-3-phosphate dehydrogenase gene

Packera serpenticola (Asteraceae; Senecioneae), a New Species from North Carolina, U. S. A.

Phylogenetic relationships of Combretoideae (Combretaceae) inferred from plastid, nuclear gene and spacer sequences

Phylogenetic relationships of the Rhizophoraceae in China based on sequences of the chloroplast gene matK and the internal transcribed spacer regions of nuclear ribosomal DNA and combined data set

Phylogeny and infrageneric classification ofSymplocos(Symplocaceae) inferred from DNA sequence data ⬇️

Population Genetics in Nonmodel Organisms: II. Natural Selection in Marginal Habitats Revealed by Deep Sequencing on Dual Platforms

Population genetic structure and conservation implications of Ceriops decandra in Malay Peninsula and North Australia

Population genetic structure of three tree species in the mangrove genus Ceriops (Rhizophoraceae) from the Indo West Pacific

Population genetics of speciation in nonmodel organisms: I. Ancestral polymorphism in mangroves

Prevalence of cryptic species in morphologically uniform taxa - Fast speciation and evolutionary radiation in Asian frogs

Pronounced genetic differentiation and recent secondary contact in the mangrove tree Lumnitzera racemosa revealed by population genomic analyses

Rapid growth of a hepatocellular carcinoma and the driving mutations revealed by cell-population genetic analysis of whole-genome data

Re-Evaluation of Phylogenetic Relationships among Species of the Mangrove Genus Avicennia from Indo-West Pacific Based on Multilocus Analyses

Recent advances in the study of ecological speciation

Sharing and reporting benefits from biodiversity research

Small RNA transcriptomes of mangroves evolve adaptively in extreme environments