Lista de obras - Zofia Szweykowska-Kulinska

<scp>PEP444c</scp> encoded within the <scp><i>MIR444c</i></scp> gene regulates <scp>microRNA444c</scp> accumulation in barley

artículo científico publicado en 2023

A Functional Network of Novel Barley MicroRNAs and Their Targets in Response to Drought

scientific article published on 29 April 2020

A Role of U12 Intron in Proper Pre-mRNA Splicing of Plant Cap Binding Protein 20 Genes.

artículo científico publicado en 2018

A cell-free yellow lupin extract containing activities of pseudouridine 35 and 55 synthases.

artículo científico publicado en 1998

A comparison of group II introns of plastid tRNALysUUU genes encoding maturase protein

artículo científico publicado en 2004

A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis

artículo científico publicado en 2022

A nuclear tRNA(UGASer) gene from the wheat Triticum vulgare var. Aria

artículo científico publicado en 1989

A stable tRNA-like molecule is generated from the long noncoding RNA GUT15 in Arabidopsis

artículo científico publicado en 2018

Abscisic acid does not influence the subcellular distribution of the HYL1 protein from Arabidopsis thaliana.

artículo científico publicado en 2008

Active 5' splice sites regulate the biogenesis efficiency of Arabidopsis microRNAs derived from intron-containing genes

artículo científico publicado en 2016

Arabidopsi s Spliceosome Factor SmD3 Modulates Immunity to Pseudomonas syringae Infection

artículo científico publicado en 2021

Arabidopsis microRNA expression regulation in a wide range of abiotic stress responses

artículo científico publicado en 2015

Arabidopsis suppressor mutant of abh1 shows a new face of the already known players: ABH1 (CBP80) and ABI4-in response to ABA and abiotic stresses during seed germination.

artículo científico publicado en 2012

Arabidopsis thaliana microRNA162 level is posttranscriptionally regulated via splicing and polyadenylation site selection

artículo científico publicado en 2016

Barley microRNAs as metabolic sensors for soil nitrogen availability

artículo científico publicado en 2020

Barley primary microRNA expression pattern is affected by soil water availability

artículo científico publicado en 2016

Biological functions of modified nucleosides in transfer RNAs

artículo científico publicado en 1993

Chromatin-associated microprocessor assembly is regulated by PRP40, the U1 snRNP auxiliary protein

artículo científico publicado en 2022

Cloning and characterization of Arabidopsis thaliana AtNAP57--a homologue of yeast pseudouridine synthase Cbf5p.

artículo científico publicado en 2001

Construction of Artificial miRNAs to Prevent Drought Stress in Solanum tuberosum.

artículo científico publicado en 2016

Corrigendum: A Role of U12 Intron in Proper Pre-mRNA Splicing of Plant Cap Binding Protein 20 Genes

scientific article published on 11 October 2019

Developmental changes in barley microRNA expression profiles coupled with miRNA target analysis

artículo científico publicado en 2016

Developmentally regulated expression and complex processing of barley pri-microRNAs

artículo científico publicado en 2013

Divergent strategies displayed by potato ( Solanum tuberosum L.) cultivars to cope with soil drought

artículo científico publicado en 2017

Down-regulation of CBP80 gene expression as a strategy to engineer a drought-tolerant potato

artículo científico publicado en 2012

FUS/TLS contributes to replication-dependent histone gene expression by interaction with U7 snRNPs and histone-specific transcription factors

artículo científico publicado en 2015

Female-specific gene expression in dioecious liverwort Pellia endiviifolia is developmentally regulated and connected to archegonia production

artículo científico publicado en 2014

Gene structures and processing of Arabidopsis thaliana HYL1-dependent pri-miRNAs

artículo científico publicado en 2009

Genomewide identification of genes involved in the potato response to drought indicates functional evolutionary conservation with Arabidopsis plants

artículo científico publicado en 2017

Heat Stress Affects Pi-related Genes Expression and Inorganic Phosphate Deposition/Accumulation in Barley

scientific article published on 24 June 2016

High-throughput sequencing identification of novel and conserved miRNAs in the Brassica oleracea leaves

artículo científico publicado en 2013

Identification of human tRNA:m5C methyltransferase catalysing intron-dependent m5C formation in the first position of the anticodon of the pre-tRNA Leu (CAA)

artículo científico publicado en 2006

Identification of transcription factors that bind to the 5'-UTR of the barley PHO2 gene

artículo científico publicado en 2019

Intergenic sequences of clustered tRNA genes: new type of genetic marker for phylogenetic studies, with application to the taxonomy of liverworts

artículo científico publicado en 1998

Introns of plant pri-miRNAs enhance miRNA biogenesis.

artículo científico publicado en 2013

Involvement of the nuclear cap-binding protein complex in alternative splicing in Arabidopsis thaliana

artículo científico publicado en 2010

MicroRNA biogenesis: Epigenetic modifications as another layer of complexity in the microRNA expression regulation.

artículo científico publicado en 2016

MicroRNA-mediated regulation of flower development in grasses

artículo científico publicado en 2016

MicroRNAs Are Intensively Regulated during Induction of Somatic Embryogenesis in Arabidopsis.

artículo científico publicado en 2017

Micromanagement of Developmental and Stress-Induced Senescence: The Emerging Role of MicroRNAs

article

Mutation in HvCBP20 (Cap Binding Protein 20) Adapts Barley to Drought Stress at Phenotypic and Transcriptomic Levels.

artículo científico publicado en 2017

Mutations of Arabidopsis thaliana pre-tRNA(Tyr) affecting pseudouridylation of U35

scientific article published on 01 October 1995

New DNA markers for discrimination between closely-related species and for the reconstruction of historical events; an example using liverworts

artículo científico publicado en 2002

Non-Canonical Processing of Arabidopsis pri-miR319a/b/c Generates Additional microRNAs to Target One RAP2.12 mRNA Isoform.

artículo científico publicado en 2012

Novel Nuclear Functions of Arabidopsis ARGONAUTE1: Beyond RNA Interference

scientific article published on 03 January 2019

Novel candidate genes AuxRP and Hsp90 influence the chip color of potato tubers.

artículo científico publicado en 2015

Novel genes specifically expressed during the development of the male thalli and antheridia in the dioecious liverwort Pellia endiviifolia.

artículo científico publicado en 2011

Nucleotide sequence of a nuclear tRNA(Tyr) gene from Triticum aestivum

artículo científico publicado en 1992

Nucleotide sequence of nuclear tRNA(Gly) genes and tRNA(Gly) pseudogenes from yellow lupin (Lupinus luteus): expression of the tRNA(Gly) genes in vitro and in vivo

artículo científico publicado el 1 de enero de 1997

N⁶-methyladenosine (m⁶A): Revisiting the Old with Focus on New, an Arabidopsis thaliana Centered Review

artículo científico publicado en 2018

Organellar Inheritance in the Allopolyploid Moss Plagiomnium curvatulum

artículo científico publicado en 2008

Organellar Inheritance in the Allopolyploid Moss Rhizomnium pseudopunctatum

artículo científico publicado en 2005

Organellar inheritance in liverworts: an example of Pellia borealis

artículo científico publicado en 2003

Phylogeny of the European species of the genus Pellia (Hepaticae; Metzgeriales) based on the molecular data from nuclear tRNA(Leu)(CAA) intergenic sequences

artículo científico publicado en 2001

Pi-starvation induced transcriptional changes in barley revealed by a comprehensive RNA-Seq and degradome analyses

scientific article published on 09 March 2021

Plant micro RNA biogenesis

artículo científico publicado en 2008

Post-transcriptional Regulation of MicroRNA Accumulation and Function: New Insights from Plants

artículo científico publicado en 2018

Posttranscriptional coordination of splicing and miRNA biogenesis in plants.

artículo científico publicado en 2016

Promoter-based identification of novel non-coding RNAs reveals the presence of dicistronic snoRNA-miRNA genes in Arabidopsis thaliana.

artículo científico publicado en 2015

Pseudouridine synthases--enzymes introducing the most abundant modified nucleoside in nucleic acids--pseudouridine

artículo científico publicado en 2001

Pseudouridylation of U(35) in the anticodon of Arabidopsis thaliana pre-tRNA(Tyr) depends on length rather than structure of an intron

artículo científico publicado en 2002

Quantitative Analysis of Plant miRNA Primary Transcripts

artículo científico publicado en 2021

R-Loops between nascent pri-miRNAs and the encoding loci promote co-transcriptional processing of miRNAs in plants

artículo científico publicado en 2021

R-loops at microRNA encoding loci promote co-transcriptional processing of pri-miRNAs in plants

artículo científico publicado en 2022

RAPD technique for taxonomic studies of Pellia epiphylla-complex (Hepaticae, Metzgeriales).

artículo científico publicado en 1998

RNA interference and its role in the regulation of eucaryotic gene expression

artículo científico publicado en 2003

RNAi and viral vectors as useful tools in the functional genomics of plants. Construction of BMV-based vectors for RNA delivery into plant cells

artículo científico publicado en 2002

Regulation of Plant Microprocessor Function in Shaping microRNA Landscape.

artículo científico publicado en 2018

Regulation of plant gene expression by alternative splicing

artículo científico publicado en 2010

Role of microRNAs and other sRNAs of plants in their changing environments.

artículo científico

SERRATE interacts with the nuclear exosome targeting (NEXT) complex to degrade primary miRNA precursors in Arabidopsis

scientific article published on 25 May 2020

STAT activation and differential complex formation dictate selectivity of interferon responses

scientific journal article

Salt Stress Reveals a New Role for ARGONAUTE1 in miRNA Biogenesis at the Transcriptional and Posttranscriptional Levels

artículo científico publicado en 2016

Successful Extraction of DNA from 100-Year-Old Herbarium Specimens of the Liverwort Bazzania trilobata

artículo científico publicado en 2005

The Arabidopsis CBP20 targets the cap-binding complex to the nucleus, and is stabilized by CBP80.

artículo científico publicado en 2009

The Non-Coding RNA Journal Club: Highlights on Recent Papers.

artículo científico publicado en 2015

The Non-Coding RNA Journal Club: Highlights on Recent Papers—2.

artículo científico publicado en 2015

The Old and New RNA World

artículo científico publicado en 2014

The Role of the P1BS Element Containing Promoter-Driven Genes in Pi Transport and Homeostasis in Plants.

artículo científico publicado en 2012

The SERRATE protein is involved in alternative splicing in Arabidopsis thaliana

artículo científico publicado en 2014

The SERRATE protein is involved in alternative splicing in Arabidopsis thaliana

scientific article published on 01 February 2020

The brome mosaic virus-based recombination vector triggers a limited gene silencing response depending on the orientation of the inserted sequence

artículo científico publicado en 2009

The crosstalk between plant microRNA biogenesis factors and the spliceosome

artículo científico publicado en 2013

The human tRNA m (5) C methyltransferase Misu is multisite-specific

artículo científico publicado en 2012

The identification of differentially expressed genes in male and female gametophytes of simple thalloid liverwort Pellia endiviifolia sp. B using an RNA-seq approach

artículo científico publicado en 2020

The liverwort Pellia endiviifolia shares microtranscriptomic traits that are common to green algae and land plants

artículo científico publicado en 2014

The nuclear cap-binding protein complex is not essential for nonsense-mediated mRNA decay (NMD) in plants

artículo científico publicado en 2008

The plastid-nucleus located DNA/RNA binding protein WHIRLY1 regulates microRNA-levels during stress in barley (Hordeum vulgare L.).

artículo científico publicado en 2018

Transcriptionally and post-transcriptionally regulated microRNAs in heat stress response in barley

artículo científico publicado en 2014

Two intron-containing pre-tRNAs(Tyr) from Triticum aestivum are efficiently processed and spliced in homologous cell-free extract

artículo científico publicado el 1 de enero de 1992

[About inteins: their structure, evolution and applications]

artículo científico publicado en 2004

[Nonsense-mediated mRNA decay (NMD)--on guard of mRNA quality]

artículo científico publicado en 2006

mRNA adenosine methylase (MTA) deposits m6A on pri-miRNAs to modulate miRNA biogenesis in Arabidopsis thaliana

artículo científico publicado en 2020

miR393 is required for production of proper auxin signalling outputs

artículo científico publicado en 2014

miRNA Detection by Stem-Loop RT-qPCR in Studying microRNA Biogenesis and microRNA Responsiveness to Abiotic Stresses

artículo científico publicado en 2019

mirEX 2.0 - an integrated environment for expression profiling of plant microRNAs

artículo científico publicado en 2015

mirEX: a platform for comparative exploration of plant pri-miRNA expression data

artículo científico publicado en 2011

tRex: A Web Portal for Exploration of tRNA-Derived Fragments in Arabidopsis thaliana.

artículo científico publicado en 2017

Lista de obras de Zofia Szweykowska-Kulinska

<scp>PEP444c</scp> encoded within the <scp><i>MIR444c</i></scp> gene regulates <scp>microRNA444c</scp> accumulation in barley

A Functional Network of Novel Barley MicroRNAs and Their Targets in Response to Drought

A Role of U12 Intron in Proper Pre-mRNA Splicing of Plant Cap Binding Protein 20 Genes.

A cell-free yellow lupin extract containing activities of pseudouridine 35 and 55 synthases.

A comparison of group II introns of plastid tRNALysUUU genes encoding maturase protein

A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis

A nuclear tRNA(UGASer) gene from the wheat Triticum vulgare var. Aria

A stable tRNA-like molecule is generated from the long noncoding RNA GUT15 in Arabidopsis

Abscisic acid does not influence the subcellular distribution of the HYL1 protein from Arabidopsis thaliana.

Active 5' splice sites regulate the biogenesis efficiency of Arabidopsis microRNAs derived from intron-containing genes

Arabidopsi s Spliceosome Factor SmD3 Modulates Immunity to Pseudomonas syringae Infection

Arabidopsis microRNA expression regulation in a wide range of abiotic stress responses

Arabidopsis suppressor mutant of abh1 shows a new face of the already known players: ABH1 (CBP80) and ABI4-in response to ABA and abiotic stresses during seed germination.

Arabidopsis thaliana microRNA162 level is posttranscriptionally regulated via splicing and polyadenylation site selection

Barley microRNAs as metabolic sensors for soil nitrogen availability

Barley primary microRNA expression pattern is affected by soil water availability

Biological functions of modified nucleosides in transfer RNAs

Chromatin-associated microprocessor assembly is regulated by PRP40, the U1 snRNP auxiliary protein

Cloning and characterization of Arabidopsis thaliana AtNAP57--a homologue of yeast pseudouridine synthase Cbf5p.

Construction of Artificial miRNAs to Prevent Drought Stress in Solanum tuberosum.

Corrigendum: A Role of U12 Intron in Proper Pre-mRNA Splicing of Plant Cap Binding Protein 20 Genes

Developmental changes in barley microRNA expression profiles coupled with miRNA target analysis

Developmentally regulated expression and complex processing of barley pri-microRNAs

Divergent strategies displayed by potato ( Solanum tuberosum L.) cultivars to cope with soil drought

Down-regulation of CBP80 gene expression as a strategy to engineer a drought-tolerant potato

FUS/TLS contributes to replication-dependent histone gene expression by interaction with U7 snRNPs and histone-specific transcription factors

Female-specific gene expression in dioecious liverwort Pellia endiviifolia is developmentally regulated and connected to archegonia production

Gene structures and processing of Arabidopsis thaliana HYL1-dependent pri-miRNAs

Genomewide identification of genes involved in the potato response to drought indicates functional evolutionary conservation with Arabidopsis plants

Heat Stress Affects Pi-related Genes Expression and Inorganic Phosphate Deposition/Accumulation in Barley

High-throughput sequencing identification of novel and conserved miRNAs in the Brassica oleracea leaves

Identification of human tRNA:m5C methyltransferase catalysing intron-dependent m5C formation in the first position of the anticodon of the pre-tRNA Leu (CAA)

Identification of transcription factors that bind to the 5'-UTR of the barley PHO2 gene

Intergenic sequences of clustered tRNA genes: new type of genetic marker for phylogenetic studies, with application to the taxonomy of liverworts

Introns of plant pri-miRNAs enhance miRNA biogenesis.

Involvement of the nuclear cap-binding protein complex in alternative splicing in Arabidopsis thaliana

MicroRNA biogenesis: Epigenetic modifications as another layer of complexity in the microRNA expression regulation.

MicroRNA-mediated regulation of flower development in grasses

MicroRNAs Are Intensively Regulated during Induction of Somatic Embryogenesis in Arabidopsis.

Micromanagement of Developmental and Stress-Induced Senescence: The Emerging Role of MicroRNAs

Mutation in HvCBP20 (Cap Binding Protein 20) Adapts Barley to Drought Stress at Phenotypic and Transcriptomic Levels.

Mutations of Arabidopsis thaliana pre-tRNA(Tyr) affecting pseudouridylation of U35

New DNA markers for discrimination between closely-related species and for the reconstruction of historical events; an example using liverworts

Non-Canonical Processing of Arabidopsis pri-miR319a/b/c Generates Additional microRNAs to Target One RAP2.12 mRNA Isoform.

Novel Nuclear Functions of Arabidopsis ARGONAUTE1: Beyond RNA Interference

Novel candidate genes AuxRP and Hsp90 influence the chip color of potato tubers.

Novel genes specifically expressed during the development of the male thalli and antheridia in the dioecious liverwort Pellia endiviifolia.

Nucleotide sequence of a nuclear tRNA(Tyr) gene from Triticum aestivum

Nucleotide sequence of nuclear tRNA(Gly) genes and tRNA(Gly) pseudogenes from yellow lupin (Lupinus luteus): expression of the tRNA(Gly) genes in vitro and in vivo

N⁶-methyladenosine (m⁶A): Revisiting the Old with Focus on New, an Arabidopsis thaliana Centered Review

Organellar Inheritance in the Allopolyploid Moss Plagiomnium curvatulum

Organellar Inheritance in the Allopolyploid Moss Rhizomnium pseudopunctatum

Organellar inheritance in liverworts: an example of Pellia borealis

Phylogeny of the European species of the genus Pellia (Hepaticae; Metzgeriales) based on the molecular data from nuclear tRNA(Leu)(CAA) intergenic sequences

Pi-starvation induced transcriptional changes in barley revealed by a comprehensive RNA-Seq and degradome analyses

Plant micro RNA biogenesis

Post-transcriptional Regulation of MicroRNA Accumulation and Function: New Insights from Plants

Posttranscriptional coordination of splicing and miRNA biogenesis in plants.

Promoter-based identification of novel non-coding RNAs reveals the presence of dicistronic snoRNA-miRNA genes in Arabidopsis thaliana.

Pseudouridine synthases--enzymes introducing the most abundant modified nucleoside in nucleic acids--pseudouridine

Pseudouridylation of U(35) in the anticodon of Arabidopsis thaliana pre-tRNA(Tyr) depends on length rather than structure of an intron

Quantitative Analysis of Plant miRNA Primary Transcripts

R-Loops between nascent pri-miRNAs and the encoding loci promote co-transcriptional processing of miRNAs in plants

R-loops at microRNA encoding loci promote co-transcriptional processing of pri-miRNAs in plants

RAPD technique for taxonomic studies of Pellia epiphylla-complex (Hepaticae, Metzgeriales).

RNA interference and its role in the regulation of eucaryotic gene expression

RNAi and viral vectors as useful tools in the functional genomics of plants. Construction of BMV-based vectors for RNA delivery into plant cells

Regulation of Plant Microprocessor Function in Shaping microRNA Landscape.

Regulation of plant gene expression by alternative splicing

Role of microRNAs and other sRNAs of plants in their changing environments.

SERRATE interacts with the nuclear exosome targeting (NEXT) complex to degrade primary miRNA precursors in Arabidopsis

STAT activation and differential complex formation dictate selectivity of interferon responses

Salt Stress Reveals a New Role for ARGONAUTE1 in miRNA Biogenesis at the Transcriptional and Posttranscriptional Levels

Successful Extraction of DNA from 100-Year-Old Herbarium Specimens of the Liverwort Bazzania trilobata

The Arabidopsis CBP20 targets the cap-binding complex to the nucleus, and is stabilized by CBP80.

The Non-Coding RNA Journal Club: Highlights on Recent Papers.

The Non-Coding RNA Journal Club: Highlights on Recent Papers—2.

The Old and New RNA World

The Role of the P1BS Element Containing Promoter-Driven Genes in Pi Transport and Homeostasis in Plants.