Lista de obras - Jan Strugnell - Dominio Público Uruguay

A barcode of life database for the Cephalopoda? Considerations and concerns

A biogeographic framework of octopod species diversification: the role of the Isthmus of Panama

scientific article published on 27 March 2020

A coleoid gladius (Mollusca, Cephalopoda) from the Albian of Normandy (France): A new squid genus and species

article

A combined proteomic and transcriptomic analysis of slime secreted by the southern bottletail squid, Sepiadarium austrinum (Cephalopoda).

artículo científico publicado en 2016

A draft genome sequence of the elusive giant squid, Architeuthis dux

artículo científico publicado en 2020

A mitochondrial phylogeny of the family Onychoteuthidae (Cephalopoda: Oegopsida)

artículo científico publicado en 2018

A new pygmy squid, Idiosepius hallami n. sp. (Cephalopoda: Idiosepiidae) from eastern Australia and elevation of the southern endemic ‘notoides’ clade to a new genus, Xipholeptos n. gen.

artículo científico publicado en 2018

A panel of microsatellite loci from two species of octopus, Pareledone turqueti (Joubin, 1905) and Pareledone charcoti (Joubin, 1905).

artículo científico publicado en 2009

A snail's pace: A preliminary analysis of the effects of stress and genetics on movement of Haliotis

article

Adaptive venom evolution and toxicity in octopods is driven by extensive novel gene formation, expansion, and loss

artículo científico publicado en 2020

Advancing our understanding of the connectivity, evolution and management of marine lobsters through genetics

artículo científico publicado en 2019

Amundsen Sea Mollusca from the BIOPEARL II expedition

artículo científico publicado en 2013

Benthoctopus rigbyae, n. sp., A New Species of Cephalopod (Octopoda; Incirrata) from Near the Antarctic Peninsula

Best Foot Forward: Nanopore Long Reads, Hybrid Meta-Assembly, and Haplotig Purging Optimizes the First Genome Assembly for the Southern Hemisphere Blacklip Abalone (Haliotis rubra)

artículo científico publicado en 2019

Biodiversity redistribution under climate change: Impacts on ecosystems and human well-being.

artículo científico publicado en 2017

Body size, growth and life span: implications for the polewards range shift of Octopus tetricus in south-eastern Australia. ⬇️

artículo científico publicado en 2014

Can environmental DNA be used to detect first arrivals of the cane toad, <i>Rhinella marina</i>, into novel locations?

artículo científico publicado en 2020

Cephalopod genomics: A plan of strategies and organization

artículo científico publicado en 2012

Changes in tissue composition during larval development of the blacklip pearl oyster, Pinctada margaritifera (L.)

article

Closely related octopus species show different spatial genetic structures in response to the Antarctic seascape

artículo científico publicado en 2017

Co-estimation of phylogeny and divergence times of Argonautoidea using relaxed phylogenetics

scientific article (publication date: March 2010)

Combined Transcriptomic and Proteomic Analysis of the Posterior Salivary Gland from the Southern Blue-Ringed Octopus and the Southern Sand Octopus

artículo científico publicado en 2016

Comparative Proteomic Analysis of Slime from the Striped Pyjama Squid, Sepioloidea lineolata, and the Southern Bottletail Squid, Sepiadarium austrinum (Cephalopoda: Sepiadariidae)

artículo científico publicado en 2019

Coupled Genomic Evolutionary Histories as Signatures of Organismal Innovations in Cephalopods: Co-evolutionary Signatures Across Levels of Genome Organization May Shed Light on Functional Linkage and Origin of Cephalopod Novelties

scientific article published on 30 October 2019

Cross-disciplinarity in the advance of Antarctic ecosystem research.

artículo científico publicado en 2017

Cryptic speciation and the circumpolarity debate: A case study on endemic Southern Ocean octopuses using the COI barcode of life

DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey

scholarly article by Agnes Dettai et al published August 2011 in Polar Science

Dating Antarctic ice sheet collapse: Proposing a molecular genetic approach

scholarly article

De novo characterisation of the greenlip abalone transcriptome (Haliotis laevigata) with a focus on the heat shock protein 70 (HSP70) family.

artículo científico

De novo transcriptome assembly and functional annotation of the southern rock lobster (Jasus edwardsii)

Description and phylogenetic relationships of a new genus of octopus, Sasakiopus (Cephalopoda: Octopodidae), from the Bering Sea, with a redescription of Sasakiopus salebrosus (Sasaki, 1920)

scholarly article by Elaina M. Jorgensen et al published February 2010 in Journal of Molluscan Studies

Development of an STR panel for a non-native population of an endangered species

Diel Rhythm and Thermal Independence of Metabolic Rate in a Benthic Shark

artículo científico publicado en 2022

Divergence time estimates for major cephalopod groups: evidence from multiple genes

article

Efficiency of ddRAD target enriched sequencing across spiny rock lobster species (Palinuridae: Jasus).

artículo científico publicado en 2017

Emerging biological archives can reveal ecological and climatic change in Antarctica

artículo científico publicado en 2022

Epipodial Tentacle Gene Expression and Predetermined Resilience to Summer Mortality in the Commercially Important Greenlip Abalone, Haliotis laevigata

artículo científico publicado en 2017

Erratum to: Positive selection in octopus haemocyanin indicates functional links to temperature adaptation

artículo científico publicado en 2015

Evolutionary innovations in Antarctic brittle stars linked to glacial refugia

artículo científico publicado en 2021

Expanded description of Opisthoteuthis hardyi based on new specimens from the Patagonian slope

scholarly article in Journal of the Marine Biological Association of the United Kingdom, vol. 90 no. 3, July 2009

First detection of critically endangered scalloped hammerhead sharks (Sphyrna lewini) in Guam, Micronesia, in five decades using environmental DNA

artículo científico

Future challenges in cephalopod research

scholarly article in Journal of the Marine Biological Association of the United Kingdom, vol. 95 no. 5, June 2014

Genetic analysis of hog deer (Axis porcinus) in Victoria, Australia, and its applications to invasive species and game management

artículo científico publicado en 2022

Genetic diversity and population structure of the threatened freshwater catfish, Tandanus tandanus, in Victoria, Australia

article

Genetic evidence extends the known distribution of Octopus insularis to the mid-Atlantic islands Ascension and St Helena

article

Genomic evidence for West Antarctic Ice Sheet collapse during the Last Interglacial

artículo científico publicado en 2023

Genomic signatures in the coral holobiont reveal host adaptations driven by Holocene climate change and reef specific symbionts

artículo científico publicado en 2020

Genus-level phylogeny of cephalopods using molecular markers: current status and problematic areas

artículo científico publicado en 2018

Investigation of genetic structure between deep and shallow populations of the southern Rock Lobster, Jasus edwardsii in Tasmania, Australia

artículo científico publicado en 2013

Long distance (>20 km) downstream detection of endangered stream frogs suggests an important role for eDNA in surveying for remnant amphibian populations

artículo científico

Low-coverage MiSeq next generation sequencing reveals the mitochondrial genome of the Eastern Rock Lobster, Sagmariasus verreauxi

artículo científico publicado en 2014

Managing consequences of climate-driven species redistribution requires integration of ecology, conservation and social science

artículo científico publicado en 2017

Microsatellite loci from the endemic Southern Ocean octopus Adelieledone polymorpha (Robson, 1930).

artículo científico publicado en 2009

Mitochondrial and nuclear genetic analyses of the tropical black-lip rock oyster (Saccostrea echinata) reveals population subdivision and informs sustainable aquaculture development

artículo científico publicado en 2019

Mitochondrial genome diversity and population structure of the giant squid Architeuthis: genetics sheds new light on one of the most enigmatic marine species

artículo científico publicado en 2013

Molecular phylogenetic analysis of a known and a new hydrothermal vent octopod: their relationships with the genus Benthoctopus (Cephalopoda: Octopodidae) ⬇️

artículo científico publicado en 2009

Molecular phylogeny of coleoid cephalopods (Mollusca: Cephalopoda) inferred from three mitochondrial and six nuclear loci: a comparison of alignment, implied alignment and analysis methods

article

Molecular phylogeny of coleoid cephalopods (Mollusca: Cephalopoda) using a multigene approach; the effect of data partitioning on resolving phylogenies in a Bayesian framework

artículo científico publicado en 2005

Molecular techniques and their limitations shape our view of the holobiont

artículo científico publicado en 2019

Morphological assessment of theOctopus vulgarisspecies complex evaluated in light of molecular-based phylogenetic inferences

artículo científico publicado en 2016

Neotenous origins for pelagic octopuses

artículo científico publicado en 2004

Oceanographic processes shape genetic signatures of planktonic cephalopod paralarvae in two upwelling regions

Outlier SNPs detect weak regional structure against a background of genetic homogeneity in the Eastern Rock Lobster, Sagmariasus verreauxi

artículo científico publicado en 2018

Outlier SNPs enable food traceability of the southern rock lobster, Jasus edwardsii

scientific article published in 2016

Patterns, processes and vulnerability of Southern Ocean benthos: a decadal leap in knowledge and understanding

article by Stefanie Kaiser et al published 25 April 2013 in Marine Biology

Poles apart: the "bipolar" pteropod species Limacina helicina is genetically distinct between the Arctic and Antarctic oceans

artículo científico publicado en 2010

Population genetic signatures of a climate change driven marine range extension.

artículo científico publicado en 2018

Positive selection in octopus haemocyanin indicates functional links to temperature adaptation

artículo científico publicado en 2015

Predicted strong genetic gains from the application of genomic selection to improve growth related traits in barramundi (Lates calcarifer)

artículo científico publicado en 2022

Profiles: Kudos for female Antarctic researchers ⬇️

artículo científico publicado en 2016

Quantitative Proteomic Analysis of the Slime and Ventral Mantle Glands of the Striped Pyjama Squid (Sepioloidea lineolata)

artículo científico publicado en 2020

Reproductive capacity of a marine species (Octopus tetricus) within a recent range extension area

SNP data reveals the complex and diverse evolutionary history of the blue-ringed octopus genus (Octopodidae: Hapalochlaena) in the Asia-Pacific

artículo científico publicado en 2023

Shotgun Proteomics Analysis of Saliva and Salivary Gland Tissue from the Common Octopus Octopus vulgaris

scientific article published on 27 September 2018

Signatures of Adaptation and Acclimatization to Reef Flat and Slope Habitats in the Coral Pocillopora damicornis

artículo científico publicado en 2021

Small copepods could channel missing carbon through metazoan predation

artículo científico publicado en 2018

Southern Ocean Evolution in a Global Context: A Molecular Viewpoint

Southern Ocean diversity: new paradigms from molecular ecology

artículo científico publicado en 2012

Temporal genetic patterns of diversity and structure evidence chaotic genetic patchiness in a spiny lobster.

artículo científico publicado en 2017

The Future of Aquatic Protein: Implications for Protein Sources in Aquaculture Diets

artículo científico publicado en 2019

The complete mitochondrial genome of Axis porcinus (Mammalia: Cervidae) from Victoria, Australia, using MiSeq sequencing

article

The complete mitochondrial genome of Haliotis laevigata (Gastropoda: Haliotidae) using MiSeq and HiSeq sequencing

artículo científico publicado en 2014

The complete mitochondrial genome of the pygmy squid, Idiosepius (Cephalopoda: Decapodiformes): the first representative from the family Idiosepiidae

artículo científico publicado en 2014

The effect of commercial, natural and grape seed extract supplemented diets on gene expression signatures and survival of greenlip abalone ( Haliotis laevigata ) during heat stress

article

The evolution and origin of tetrodotoxin acquisition in the blue-ringed octopus (genus Hapalochlaena)

artículo científico publicado en 2019

The ink sac clouds octopod evolutionary history

The macro- and megabenthic fauna on the continental shelf of the eastern Amundsen Sea, Antarctica

scholarly article by Katrin Linse published in October 2013

The shell matrix and microstructure of the Ram's Horn squid: molecular and structural characterization

scientific article published on 15 April 2020

The thermohaline expressway: the Southern Ocean as a centre of origin for deep-sea octopuses

scientific article published in 2008

Toxicity in Cephalopods

article

What can the mitochondrial genome reveal about higher-level phylogeny of the molluscan class Cephalopoda?

artículo científico publicado en 2011

Whole mitochondrial genome of the Ram's Horn Squid shines light on the phylogenetic position of the monotypic order Spirulida (Haeckel, 1896).

artículo científico publicado en 2017

Widespread hybridization in the introduced hog deer population of Victoria, Australia, and its implications for conservation

scientific article published on 04 September 2019

You Are What You Eat: A Genomic Analysis of the Gut Microbiome of Captive and Wild Octopus vulgaris Paralarvae and Their Zooplankton Prey

artículo científico publicado en 2017

ampir: an R package for fast genome-wide prediction of antimicrobial peptides

scientific article published on 19 July 2020

drivers of recent diversification in a marine species complex

artículo científico publicado en 2020

Allopatric speciation within a cryptic species complex of Australasian octopuses

artículo científico publicado en 2014

Lista de obras de Jan Strugnell

A barcode of life database for the Cephalopoda? Considerations and concerns

A biogeographic framework of octopod species diversification: the role of the Isthmus of Panama

A coleoid gladius (Mollusca, Cephalopoda) from the Albian of Normandy (France): A new squid genus and species

A combined proteomic and transcriptomic analysis of slime secreted by the southern bottletail squid, Sepiadarium austrinum (Cephalopoda).

A draft genome sequence of the elusive giant squid, Architeuthis dux

A mitochondrial phylogeny of the family Onychoteuthidae (Cephalopoda: Oegopsida)

A new pygmy squid, Idiosepius hallami n. sp. (Cephalopoda: Idiosepiidae) from eastern Australia and elevation of the southern endemic ‘notoides’ clade to a new genus, Xipholeptos n. gen.

A panel of microsatellite loci from two species of octopus, Pareledone turqueti (Joubin, 1905) and Pareledone charcoti (Joubin, 1905).

A snail's pace: A preliminary analysis of the effects of stress and genetics on movement of Haliotis

Adaptive venom evolution and toxicity in octopods is driven by extensive novel gene formation, expansion, and loss

Advancing our understanding of the connectivity, evolution and management of marine lobsters through genetics

Amundsen Sea Mollusca from the BIOPEARL II expedition

Benthoctopus rigbyae, n. sp., A New Species of Cephalopod (Octopoda; Incirrata) from Near the Antarctic Peninsula

Best Foot Forward: Nanopore Long Reads, Hybrid Meta-Assembly, and Haplotig Purging Optimizes the First Genome Assembly for the Southern Hemisphere Blacklip Abalone (Haliotis rubra)

Biodiversity redistribution under climate change: Impacts on ecosystems and human well-being.

Body size, growth and life span: implications for the polewards range shift of Octopus tetricus in south-eastern Australia. ⬇️

Can environmental DNA be used to detect first arrivals of the cane toad, <i>Rhinella marina</i>, into novel locations?

Cephalopod genomics: A plan of strategies and organization

Changes in tissue composition during larval development of the blacklip pearl oyster, Pinctada margaritifera (L.)

Closely related octopus species show different spatial genetic structures in response to the Antarctic seascape

Co-estimation of phylogeny and divergence times of Argonautoidea using relaxed phylogenetics

Combined Transcriptomic and Proteomic Analysis of the Posterior Salivary Gland from the Southern Blue-Ringed Octopus and the Southern Sand Octopus

Comparative Proteomic Analysis of Slime from the Striped Pyjama Squid, Sepioloidea lineolata, and the Southern Bottletail Squid, Sepiadarium austrinum (Cephalopoda: Sepiadariidae)

Coupled Genomic Evolutionary Histories as Signatures of Organismal Innovations in Cephalopods: Co-evolutionary Signatures Across Levels of Genome Organization May Shed Light on Functional Linkage and Origin of Cephalopod Novelties

Cross-disciplinarity in the advance of Antarctic ecosystem research.

Cryptic speciation and the circumpolarity debate: A case study on endemic Southern Ocean octopuses using the COI barcode of life

DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey

Dating Antarctic ice sheet collapse: Proposing a molecular genetic approach

De novo characterisation of the greenlip abalone transcriptome (Haliotis laevigata) with a focus on the heat shock protein 70 (HSP70) family.

De novo transcriptome assembly and functional annotation of the southern rock lobster (Jasus edwardsii)

Description and phylogenetic relationships of a new genus of octopus, Sasakiopus (Cephalopoda: Octopodidae), from the Bering Sea, with a redescription of Sasakiopus salebrosus (Sasaki, 1920)

Development of an STR panel for a non-native population of an endangered species

Diel Rhythm and Thermal Independence of Metabolic Rate in a Benthic Shark

Divergence time estimates for major cephalopod groups: evidence from multiple genes

Efficiency of ddRAD target enriched sequencing across spiny rock lobster species (Palinuridae: Jasus).

Emerging biological archives can reveal ecological and climatic change in Antarctica

Epipodial Tentacle Gene Expression and Predetermined Resilience to Summer Mortality in the Commercially Important Greenlip Abalone, Haliotis laevigata

Erratum to: Positive selection in octopus haemocyanin indicates functional links to temperature adaptation

Evolutionary innovations in Antarctic brittle stars linked to glacial refugia

Expanded description of Opisthoteuthis hardyi based on new specimens from the Patagonian slope

First detection of critically endangered scalloped hammerhead sharks (Sphyrna lewini) in Guam, Micronesia, in five decades using environmental DNA

Future challenges in cephalopod research

Genetic analysis of hog deer (Axis porcinus) in Victoria, Australia, and its applications to invasive species and game management

Genetic diversity and population structure of the threatened freshwater catfish, Tandanus tandanus, in Victoria, Australia

Genetic evidence extends the known distribution of Octopus insularis to the mid-Atlantic islands Ascension and St Helena

Genomic evidence for West Antarctic Ice Sheet collapse during the Last Interglacial

Genomic signatures in the coral holobiont reveal host adaptations driven by Holocene climate change and reef specific symbionts

Genus-level phylogeny of cephalopods using molecular markers: current status and problematic areas

Investigation of genetic structure between deep and shallow populations of the southern Rock Lobster, Jasus edwardsii in Tasmania, Australia

Long distance (>20 km) downstream detection of endangered stream frogs suggests an important role for eDNA in surveying for remnant amphibian populations

Low-coverage MiSeq next generation sequencing reveals the mitochondrial genome of the Eastern Rock Lobster, Sagmariasus verreauxi

Managing consequences of climate-driven species redistribution requires integration of ecology, conservation and social science

Microsatellite loci from the endemic Southern Ocean octopus Adelieledone polymorpha (Robson, 1930).

Mitochondrial and nuclear genetic analyses of the tropical black-lip rock oyster (Saccostrea echinata) reveals population subdivision and informs sustainable aquaculture development

Mitochondrial genome diversity and population structure of the giant squid Architeuthis: genetics sheds new light on one of the most enigmatic marine species

Molecular phylogenetic analysis of a known and a new hydrothermal vent octopod: their relationships with the genus Benthoctopus (Cephalopoda: Octopodidae) ⬇️

Molecular phylogeny of coleoid cephalopods (Mollusca: Cephalopoda) inferred from three mitochondrial and six nuclear loci: a comparison of alignment, implied alignment and analysis methods

Molecular phylogeny of coleoid cephalopods (Mollusca: Cephalopoda) using a multigene approach; the effect of data partitioning on resolving phylogenies in a Bayesian framework

Molecular techniques and their limitations shape our view of the holobiont

Morphological assessment of theOctopus vulgarisspecies complex evaluated in light of molecular-based phylogenetic inferences

Neotenous origins for pelagic octopuses

Oceanographic processes shape genetic signatures of planktonic cephalopod paralarvae in two upwelling regions

Outlier SNPs detect weak regional structure against a background of genetic homogeneity in the Eastern Rock Lobster, Sagmariasus verreauxi

Outlier SNPs enable food traceability of the southern rock lobster, Jasus edwardsii

Patterns, processes and vulnerability of Southern Ocean benthos: a decadal leap in knowledge and understanding

Poles apart: the "bipolar" pteropod species Limacina helicina is genetically distinct between the Arctic and Antarctic oceans

Population genetic signatures of a climate change driven marine range extension.

Positive selection in octopus haemocyanin indicates functional links to temperature adaptation

Predicted strong genetic gains from the application of genomic selection to improve growth related traits in barramundi (Lates calcarifer)

Profiles: Kudos for female Antarctic researchers ⬇️

Quantitative Proteomic Analysis of the Slime and Ventral Mantle Glands of the Striped Pyjama Squid (Sepioloidea lineolata)

Reproductive capacity of a marine species (Octopus tetricus) within a recent range extension area

SNP data reveals the complex and diverse evolutionary history of the blue-ringed octopus genus (Octopodidae: Hapalochlaena) in the Asia-Pacific

Shotgun Proteomics Analysis of Saliva and Salivary Gland Tissue from the Common Octopus Octopus vulgaris

Signatures of Adaptation and Acclimatization to Reef Flat and Slope Habitats in the Coral Pocillopora damicornis

Small copepods could channel missing carbon through metazoan predation

Southern Ocean Evolution in a Global Context: A Molecular Viewpoint

Southern Ocean diversity: new paradigms from molecular ecology

Temporal genetic patterns of diversity and structure evidence chaotic genetic patchiness in a spiny lobster.