Lista de obras - Robb T. Brumfield - Dominio Público Uruguay

A Highly Contiguous Reference Genome for Northern Bobwhite (Colinus virginianus)

artículo científico publicado en 2019

A NEW SPECIES OF THAMNOPHILUS ANTSHRIKE (AVES: THAMNOPHILIDAE) FROM THE SERRA DO DIVISOR, ACRE, BRAZIL

article

A phylogenetic approach to disentangling the role of competition and habitat filtering in community assembly of Neotropical forest birds

artículo científico publicado en 2010

A phylogeny of birds based on over 1,500 loci collected by target enrichment and high-throughput sequencing

artículo científico publicado en 2013

Adaptation to ephemeral habitat may overcome natural barriers and severe habitat fragmentation in a fire-dependent species, the Bachman's Sparrow (Peucaea aestivalis).

artículo científico publicado en 2014

Adaptive processes drive ecomorphological convergent evolution in antwrens (Thamnophilidae).

artículo científico publicado en 2014

Amazonian birds in more dynamic habitats have less population genetic structure and higher gene flow

scientific article published in 2023

Applications of next-generation sequencing to phylogeography and phylogenetics

artículo científico publicado en 2011

CLINAL VARIATION IN VOCALIZATIONS OF AN ANTBIRD (THAMNOPHILIDAE) AND IMPLICATIONS FOR DEFINING SPECIES LIMITS

artículo científico publicado en 2005

Certhiasomus, a new genus of woodcreeper (Aves: Passeriformes: Dendrocolaptidae) ⬇️

artículo científico publicado en 2010

Comparison of species tree methods for reconstructing the phylogeny of bearded manakins (Aves: Pipridae, Manacus) from multilocus sequence data

artículo científico publicado en 2008

Correlated evolution of beak morphology and song in the neotropical woodcreeper radiation

artículo científico publicado en 2012

DNA sequence data reveal a subfamily-level divergence within Thamnophilidae (Aves: Passeriformes).

artículo científico publicado en 2012

Dense sampling of bird diversity increases power of comparative genomics

artículo científico publicado en 2020

Earth history and the passerine superradiation

artículo científico publicado en 2019

Ecological drivers of song evolution in birds: Disentangling the effects of habitat and morphology.

artículo científico publicado en 2018

Ecological opportunity and diversification in a continental radiation of birds: climbing adaptations and cladogenesis in the Furnariidae

artículo científico publicado en 2012

Ecology Predicts Levels of Genetic Differentiation in Neotropical Birds

scientific article published in 2009

Ecology predicts levels of genetic differentiation in neotropical birds

artículo científico publicado en 2009

Epinecrophylla, a new genus of antwrens (Aves: Passeriformes: Thamnophilidae)

artículo científico publicado en 2006

Estimating species trees using multiple-allele DNA sequence data

artículo científico publicado en 2008

Evolution into and out of the Andes: a Bayesian analysis of historical diversification in Thamnophilus antshrikes

artículo científico publicado en 2007

Exploring Conflicts in Whole Genome Phylogenetics: A Case Study Within Manakins (Aves: Pipridae)

artículo científico publicado en 2022

Extensive paraphyly in the typical owl family (Strigidae)

artículo científico

Fifty shades of brown: Macroevolution of plumage brightness in the Furnariida, a large clade of drab Neotropical passerines

scientific article published on 14 March 2019

Fourfold polyphyly of the genus formerly known as Upucerthia, with notes on the systematics and evolution of the avian subfamily Furnariinae.

artículo científico publicado en 2007

Future of Avian Genetic Resources Collections: Archives of Evolutionary and Environmental History

article published in 2005

Gene sampling strategies for multi-locus population estimates of genetic diversity (theta).

artículo científico publicado en 2007

Genetic Differentiation and Taxonomy in the House Wren Species Group

scholarly article published in The Condor in August 1996

Genomic insights into adaptation to high-altitude environments

artículo científico publicado en 2011

Genomic variation in a widespread Neotropical bird (Xenops minutus) reveals divergence, population expansion, and gene flow

artículo científico publicado en 2014

Geocerthia, a new genus of terrestrial ovenbird (Aves: Passeriformes: Furnariidae) ⬇️

artículo científico publicado en 2009

Geographic variation and phylogenetic relationships of Myiopagis olallai (Aves: Passeriformes; Tyrannidae), with the description of two new taxa from the Northern Andes

artículo científico publicado en 2014

Haldane's rule in an avian system: using cline theory and divergence population genetics to test for differential introgression of mitochondrial, autosomal, and sex-linked loci across the Passerina bunting hybrid zone

artículo científico publicado en 2008

High dispersal ability inhibits speciation in a continental radiation of passerine birds

artículo científico publicado en 2012

Historical Diversification of Birds in Northwestern South America: A Molecular Perspective on the Role of Vicariant Events

Historical divergence and gene flow: coalescent analyses of mitochondrial, autosomal and sex-linked loci in Passerina buntings

artículo científico publicado en 2010

Host feeding patterns of Culex mosquitoes (Diptera: Culicidae) in East Baton Rouge Parish, Louisiana

artículo científico publicado en 2010

Implications of headwater contact zones for the riverine barrier hypothesis: a case study of the Blue-capped Manakin (<i>Lepidothrix coronata</i>)

artículo científico publicado en 2023

Integrating phylogenetic and population genetic analyses of multiple loci to test species divergence hypotheses in Passerina buntings

artículo científico publicado en 2008

Lineage diversification and morphological evolution in a large-scale continental radiation: the neotropical ovenbirds and woodcreepers (aves: Furnariidae).

artículo científico publicado en 2011

MITOCHONDRIAL VARIATION IN BOLIVIAN POPULATIONS OF THE VARIABLE ANTSHRIKE (THAMNOPHILUS CAERULESCENS)

scientific article published in 2005

Migration-selection balance and local adaptation of mitochondrial haplotypes in rufous-collared sparrows (Zonotrichia capensis) along an elevational gradient

artículo científico publicado en 2009

Mitochondrial genomes and thousands of ultraconserved elements resolve the taxonomy and historical biogeography of the Euphonia and Chlorophonia finches (Passeriformes: Fringillidae) ⬇️

artículo científico publicado en 2020

More than 1000 ultraconserved elements provide evidence that turtles are the sister group of archosaurs ⬇️

artículo científico publicado en 2012

Next-generation sequencing reveals phylogeographic structure and a species tree for recent bird divergences

artículo científico publicado en 2011

Non-monophyly and deep genetic differentiation across low-elevation barriers in a Neotropical montane bird (Basileuterus tristriatus; Aves: Parulidae).

artículo científico publicado en 2012

PHYLOGENETIC RELATIONSHIPS IN BEARDED MANAKINS (PIPRIDAE: MANACUS) INDICATE THAT MALE PLUMAGE COLOR IS A MISLEADING TAXONOMIC MARKER1

scientific article published in 2001

PRGmatic: an efficient pipeline for collating genome‐enriched second‐generation sequencing data using a ‘provisional‐reference genome’ ⬇️

artículo científico publicado el 24 de marzo de 2011

Phylogenetic and ecological determinants of the neotropical dawn chorus

artículo científico publicado en 2006

Phylogenetic conservatism and antiquity of a tropical specialization: army-ant-following in the typical antbirds (Thamnophilidae).

artículo científico publicado en 2007

Phylogenomic analyses reveal non-monophyly of the antbird genera Herpsilochmus and Sakesphorus (Thamnophilidae), with description of a new genus for Herpsilochmus sellowi ⬇️

artículo científico publicado en 2021

Phylogeny and comparative phylogeography of Sclerurus (Aves: Furnariidae) reveal constant and cryptic diversification in an old radiation of rain forest understorey specialists

scholarly article by Fernando M. d'Horta et al published 20 September 2012 in Journal of Biogeography

Positive association between population genetic differentiation and speciation rates in New World birds

artículo científico publicado en 2017

Pseudasthenes, a new genus of ovenbird (Aves: Passeriformes: Furnariidae) ⬇️

artículo científico publicado en 2010

Sampling locality is more detectable than taxonomy or ecology in the gut microbiota of the brood-parasitic Brown-headed Cowbird (Molothrus ater).

artículo científico publicado en 2014

Sequence variation in the coding region of the melanocortin-1 receptor gene (MC1R) is not associated with plumage variation in the blue-crowned manakin (Lepidothrix coronata)

article

Similarity thresholds used in DNA sequence assembly from short reads can reduce the comparability of population histories across species

artículo científico publicado en 2015

Song divergence by sensory drive in Amazonian birds

artículo científico publicado en 2010

Speciation genetics of biological invasions with hybridization ⬇️

artículo científico publicado el 1 de diciembre de 2010

Speciation in Passerina buntings: introgression patterns of sex-linked loci identify a candidate gene region for reproductive isolation

artículo científico publicado en 2009

Species coexistence and the dynamics of phenotypic evolution in adaptive radiation

artículo científico publicado en 2013

Systematics of the obligate ant-following clade of antbirds (Aves: Passeriformes: Thamnophilidae)

Target capture and massively parallel sequencing of ultraconserved elements for comparative studies at shallow evolutionary time scales

artículo científico publicado en 2013

Tarphonomus, a new genus of ovenbird (Aves: Passeriformes: Furnariidae) from South America

article

The drivers of tropical speciation

artículo científico publicado en 2014

The dual role of Amazonian rivers in the generation and maintenance of avian diversity

artículo científico publicado en 2018

The effect of marker choice on estimated levels of introgression across an avian (Pipridae: Manacus) hybrid zone

artículo científico publicado en 2009

The genomic consequences of adaptive divergence and reproductive isolation between species of manakins.

artículo científico publicado en 2013

The need for proper vouchering in phylogenetic studies of birds

article

The role of physical barriers in the location of avian suture zones in the Guiana Shield, northern Amazonia

artículo científico publicado en 2012

The utility of single nucleotide polymorphisms in inferences of population history

article by Robb T. Brumfield et al published May 2003 in Trends in Ecology & Evolution

Transcriptomic variation and plasticity in rufous-collared sparrows (Zonotrichia capensis) along an altitudinal gradient

artículo científico publicado en 2008

Ultraconserved elements anchor thousands of genetic markers spanning multiple evolutionary timescales

artículo científico publicado en 2012

Whole-genome analyses resolve early branches in the tree of life of modern birds

artículo científico publicado en 2014

HZAR: hybrid zone analysis using an R software package

artículo científico publicado en 2013

Plantilla:Harvey et al., 2020

artículo científico publicado en 2020

Lista de obras de Robb T. Brumfield

A Highly Contiguous Reference Genome for Northern Bobwhite (Colinus virginianus)

A NEW SPECIES OF THAMNOPHILUS ANTSHRIKE (AVES: THAMNOPHILIDAE) FROM THE SERRA DO DIVISOR, ACRE, BRAZIL

A phylogenetic approach to disentangling the role of competition and habitat filtering in community assembly of Neotropical forest birds

A phylogeny of birds based on over 1,500 loci collected by target enrichment and high-throughput sequencing

Adaptation to ephemeral habitat may overcome natural barriers and severe habitat fragmentation in a fire-dependent species, the Bachman's Sparrow (Peucaea aestivalis).

Adaptive processes drive ecomorphological convergent evolution in antwrens (Thamnophilidae).

Amazonian birds in more dynamic habitats have less population genetic structure and higher gene flow

Applications of next-generation sequencing to phylogeography and phylogenetics

CLINAL VARIATION IN VOCALIZATIONS OF AN ANTBIRD (THAMNOPHILIDAE) AND IMPLICATIONS FOR DEFINING SPECIES LIMITS

Certhiasomus, a new genus of woodcreeper (Aves: Passeriformes: Dendrocolaptidae) ⬇️

Comparison of species tree methods for reconstructing the phylogeny of bearded manakins (Aves: Pipridae, Manacus) from multilocus sequence data

Correlated evolution of beak morphology and song in the neotropical woodcreeper radiation

DNA sequence data reveal a subfamily-level divergence within Thamnophilidae (Aves: Passeriformes).

Dense sampling of bird diversity increases power of comparative genomics

Earth history and the passerine superradiation

Ecological drivers of song evolution in birds: Disentangling the effects of habitat and morphology.

Ecological opportunity and diversification in a continental radiation of birds: climbing adaptations and cladogenesis in the Furnariidae

Ecology Predicts Levels of Genetic Differentiation in Neotropical Birds

Ecology predicts levels of genetic differentiation in neotropical birds

Epinecrophylla, a new genus of antwrens (Aves: Passeriformes: Thamnophilidae)

Estimating species trees using multiple-allele DNA sequence data

Evolution into and out of the Andes: a Bayesian analysis of historical diversification in Thamnophilus antshrikes

Exploring Conflicts in Whole Genome Phylogenetics: A Case Study Within Manakins (Aves: Pipridae)

Extensive paraphyly in the typical owl family (Strigidae)

Fifty shades of brown: Macroevolution of plumage brightness in the Furnariida, a large clade of drab Neotropical passerines

Fourfold polyphyly of the genus formerly known as Upucerthia, with notes on the systematics and evolution of the avian subfamily Furnariinae.

Future of Avian Genetic Resources Collections: Archives of Evolutionary and Environmental History

Gene sampling strategies for multi-locus population estimates of genetic diversity (theta).

Genetic Differentiation and Taxonomy in the House Wren Species Group

Genomic insights into adaptation to high-altitude environments

Genomic variation in a widespread Neotropical bird (Xenops minutus) reveals divergence, population expansion, and gene flow

Geocerthia, a new genus of terrestrial ovenbird (Aves: Passeriformes: Furnariidae) ⬇️

Geographic variation and phylogenetic relationships of Myiopagis olallai (Aves: Passeriformes; Tyrannidae), with the description of two new taxa from the Northern Andes

Haldane's rule in an avian system: using cline theory and divergence population genetics to test for differential introgression of mitochondrial, autosomal, and sex-linked loci across the Passerina bunting hybrid zone

High dispersal ability inhibits speciation in a continental radiation of passerine birds

Historical Diversification of Birds in Northwestern South America: A Molecular Perspective on the Role of Vicariant Events

Historical divergence and gene flow: coalescent analyses of mitochondrial, autosomal and sex-linked loci in Passerina buntings

Host feeding patterns of Culex mosquitoes (Diptera: Culicidae) in East Baton Rouge Parish, Louisiana

Implications of headwater contact zones for the riverine barrier hypothesis: a case study of the Blue-capped Manakin (<i>Lepidothrix coronata</i>)

Integrating phylogenetic and population genetic analyses of multiple loci to test species divergence hypotheses in Passerina buntings

Lineage diversification and morphological evolution in a large-scale continental radiation: the neotropical ovenbirds and woodcreepers (aves: Furnariidae).

MITOCHONDRIAL VARIATION IN BOLIVIAN POPULATIONS OF THE VARIABLE ANTSHRIKE (THAMNOPHILUS CAERULESCENS)

Migration-selection balance and local adaptation of mitochondrial haplotypes in rufous-collared sparrows (Zonotrichia capensis) along an elevational gradient

Mitochondrial genomes and thousands of ultraconserved elements resolve the taxonomy and historical biogeography of the Euphonia and Chlorophonia finches (Passeriformes: Fringillidae) ⬇️

More than 1000 ultraconserved elements provide evidence that turtles are the sister group of archosaurs ⬇️

Next-generation sequencing reveals phylogeographic structure and a species tree for recent bird divergences

Non-monophyly and deep genetic differentiation across low-elevation barriers in a Neotropical montane bird (Basileuterus tristriatus; Aves: Parulidae).

PHYLOGENETIC RELATIONSHIPS IN BEARDED MANAKINS (PIPRIDAE: MANACUS) INDICATE THAT MALE PLUMAGE COLOR IS A MISLEADING TAXONOMIC MARKER1

PRGmatic: an efficient pipeline for collating genome‐enriched second‐generation sequencing data using a ‘provisional‐reference genome’ ⬇️

Phylogenetic and ecological determinants of the neotropical dawn chorus

Phylogenetic conservatism and antiquity of a tropical specialization: army-ant-following in the typical antbirds (Thamnophilidae).

Phylogenomic analyses reveal non-monophyly of the antbird genera Herpsilochmus and Sakesphorus (Thamnophilidae), with description of a new genus for Herpsilochmus sellowi ⬇️

Phylogeny and comparative phylogeography of Sclerurus (Aves: Furnariidae) reveal constant and cryptic diversification in an old radiation of rain forest understorey specialists

Positive association between population genetic differentiation and speciation rates in New World birds

Pseudasthenes, a new genus of ovenbird (Aves: Passeriformes: Furnariidae) ⬇️

Sampling locality is more detectable than taxonomy or ecology in the gut microbiota of the brood-parasitic Brown-headed Cowbird (Molothrus ater).

Sequence variation in the coding region of the melanocortin-1 receptor gene (MC1R) is not associated with plumage variation in the blue-crowned manakin (Lepidothrix coronata)

Similarity thresholds used in DNA sequence assembly from short reads can reduce the comparability of population histories across species

Song divergence by sensory drive in Amazonian birds

Speciation genetics of biological invasions with hybridization ⬇️

Speciation in Passerina buntings: introgression patterns of sex-linked loci identify a candidate gene region for reproductive isolation

Species coexistence and the dynamics of phenotypic evolution in adaptive radiation

Systematics of the obligate ant-following clade of antbirds (Aves: Passeriformes: Thamnophilidae)

Target capture and massively parallel sequencing of ultraconserved elements for comparative studies at shallow evolutionary time scales

Tarphonomus, a new genus of ovenbird (Aves: Passeriformes: Furnariidae) from South America

The drivers of tropical speciation

The dual role of Amazonian rivers in the generation and maintenance of avian diversity

The effect of marker choice on estimated levels of introgression across an avian (Pipridae: Manacus) hybrid zone

The genomic consequences of adaptive divergence and reproductive isolation between species of manakins.

The need for proper vouchering in phylogenetic studies of birds

The role of physical barriers in the location of avian suture zones in the Guiana Shield, northern Amazonia

The utility of single nucleotide polymorphisms in inferences of population history

Transcriptomic variation and plasticity in rufous-collared sparrows (Zonotrichia capensis) along an altitudinal gradient

Ultraconserved elements anchor thousands of genetic markers spanning multiple evolutionary timescales

Whole-genome analyses resolve early branches in the tree of life of modern birds

HZAR: hybrid zone analysis using an R software package

Plantilla:Harvey et al., 2020