Lista de obras - Natasa Przulj - Dominio Público Uruguay

2-Tree probe interval graphs have a large obstruction set

A framework for FPGA acceleration of large graph problems: Graphlet counting case study

A global genetic interaction network maps a wiring diagram of cellular function

artículo científico publicado en 2016

An integrative approach to modeling biological networks

artículo científico publicado en 2010

Anti-nicastrin monoclonal antibodies elicit pleiotropic anti-tumour pharmacological effects in invasive breast cancer cells

artículo científico publicado en 2014

Antiproliferative activity and mode of action analysis of novel amino and amido substituted phenantrene and naphtho[2,1-b]thiophene derivatives

scientific article published on 06 November 2019

Author Correction: Towards a data-integrated cell

artículo científico publicado en 2019

Biological function through network topology: a survey of the human diseasome

artículo científico publicado en 2012

Biological network comparison using graphlet degree distribution

artículo científico publicado en 2007

Biological network comparison using graphlet degree distribution

Bridging the gaps in systems biology

artículo científico publicado en 2014

C-GRAAL: common-neighbors-based global GRAph ALignment of biological networks

artículo científico publicado en 2012

Characterization of cell cycle specific protein interaction networks of the yeast 26S proteasome complex by the QTAX strategy

artículo científico publicado en 2010

Characterization of the proteasome interaction network using a QTAX-based tag-team strategy and protein interaction network analysis

artículo científico publicado en 2008

Classification in biological networks with hypergraphlet kernels

artículo científico publicado en 2020

Complementarity of network and sequence information in homologous proteins

artículo científico publicado en 2010

Critical Review on Zeolite Clinoptilolite Safety and Medical Applications

article

Discovering disease-disease associations by fusing systems-level molecular data

artículo científico publicado en 2013

Dominating biological networks

artículo científico publicado en 2011

Drugst.One — a plug-and-play solution for online systems medicine and network-based drug repurposing

artículo científico publicado en 2024

Erratum to: Anti-nicastrin monoclonal antibodies elicit pleiotropic anti-tumour pharmacological effects in invasive breast cancer cells.

artículo científico publicado en 2014

Fitting a geometric graph to a protein-protein interaction network

artículo científico publicado en 2008

From Topology to Phenotype in Protein–Protein Interaction Networks

Functional geometry of protein interactomes

artículo científico publicado en 2019

Functional topology in a network of protein interactions

artículo científico publicado en 2004

Fuse: multiple network alignment via data fusion

artículo científico publicado en 2015

GR-Align: fast and flexible alignment of protein 3D structures using graphlet degree similarity.

artículo científico publicado en 2014

Genetic mapping of a leaf rust resistance gene in the former Yugoslavian barley landrace MBR1012

article

Geometric Local Structure in Biological Networks

Geometric de-noising of protein-protein interaction networks

artículo científico publicado en 2009

Geometric evolutionary dynamics of protein interaction networks.

artículo científico publicado en 2010

GraphCrunch 2: Software tool for network modeling, alignment and clustering

artículo científico publicado en 2011

GraphCrunch: a tool for large network analyses

artículo científico publicado en 2008

Graphlet Laplacians for topology-function and topology-disease relationships

artículo científico publicado en 2019

Graphlet eigencentralities capture novel central roles of genes in pathways

artículo científico publicado en 2022

Graphlet-based Characterization of Directed Networks

artículo científico publicado en 2016

Graphlet-based measures are suitable for biological network comparison

artículo científico publicado en 2013

Hereditary dominating pair graphs

High-throughput mapping of a dynamic signaling network in mammalian cells

artículo científico publicado en 2005

Higher-order molecular organization as a source of biological function

scientific article published on 01 September 2018

Integration of molecular network data reconstructs Gene Ontology

artículo científico publicado en 2014

Integrative methods for analyzing big data in precision medicine

artículo científico publicado en 2015

Integrative network alignment reveals large regions of global network similarity in yeast and human

artículo científico publicado en 2011

Introduction to the Special Issue on Biological Networks

L-GRAAL: Lagrangian graphlet-based network aligner

artículo científico publicado en 2015

Learning the structure of protein-protein interaction networks.

artículo científico publicado en 2009

Methods for biological data integration: perspectives and challenges

artículo científico publicado en 2015

Modeling interactome: scale-free or geometric?

artículo científico publicado en 2004

Modelling protein-protein interaction networks via a stickiness index

artículo científico publicado en 2006

Modelling the yeast interactome

artículo científico publicado en 2014

NETWORK ANALYSIS. Network analytics in the age of big data

artículo científico publicado en 2016

Network topology reveals key cardiovascular disease genes

artículo científico publicado en 2013

Network wiring of pleiotropic kinases yields insight into protective role of diabetes on aneurysm

artículo científico publicado en 2014

Not all scale-free networks are born equal: the role of the seed graph in PPI network evolution

artículo científico publicado en 2007

Omics Data Complementarity Underlines Functional Cross-Communication in Yeast

artículo científico publicado en 2017

Optimal network alignment with graphlet degree vectors

artículo científico publicado en 2010

Optimized null model for protein structure networks.

artículo científico publicado en 2009

PATIENT-SPECIFIC DATA FUSION FOR CANCER STRATIFICATION AND PERSONALISED TREATMENT.

artículo científico publicado en 2016

Predicting disease associations via biological network analysis.

artículo científico publicado en 2014

Probabilistic graphlets capture biological function in probabilistic molecular networks

artículo científico publicado el 1 de diciembre de 2020

Proper evaluation of alignment-free network comparison methods

artículo científico publicado en 2015

Protein complex prediction via cost-based clustering

artículo científico publicado en 2004

Protein complex prediction with RNSC.

artículo científico publicado en 2012

Protein interaction network topology uncovers melanogenesis regulatory network components within functional genomics datasets

artículo científico publicado en 2010

Protein‐protein interactions: Making sense of networks via graph‐theoretic modeling ⬇️

artículo científico publicado el 1 de febrero de 2011

Random Graph Models and Their Application to Protein-Protein Interaction Networks

Rebuttal to the Letter to the Editor in response to the paper: proper evaluation of alignment-free network comparison methods.

artículo científico publicado en 2017

Revealing the hidden language of complex networks.

artículo científico publicado en 2014

Structure of brain functional networks

artículo científico publicado en 2009

Survey of network-based approaches to research of cardiovascular diseases

artículo científico publicado en 2014

Systematic protein-protein interaction mapping for clinically relevant human GPCRs

artículo científico publicado en 2017

Systems-level cancer gene identification from protein interaction network topology applied to melanogenesis-related functional genomics data

artículo científico publicado en 2010

The Core Diseasome

artículo científico publicado en 2012

The integrated disease network

artículo científico publicado en 2014

The role of genes co-amplified with nicastrin in breast invasive carcinoma.

artículo científico publicado en 2013

The topology of the growing human interactome data

artículo científico publicado en 2014

Topological Characteristics of Molecular Networks

Topological network alignment uncovers biological function and phylogeny

artículo científico publicado en 2010

Topology-function conservation in protein-protein interaction networks

artículo científico publicado en 2015

Towards a data-integrated cell

scientific article published on 18 February 2019

Uncovering biological network function via graphlet degree signatures.

artículo científico publicado en 2008

Unified Alignment of Protein-Protein Interaction Networks

artículo científico publicado en 2017

Unveiling new disease, pathway, and gene associations via multi-scale neural network

artículo científico publicado en 2020

Lista de obras de Natasa Przulj

2-Tree probe interval graphs have a large obstruction set

A framework for FPGA acceleration of large graph problems: Graphlet counting case study

A global genetic interaction network maps a wiring diagram of cellular function

An integrative approach to modeling biological networks

Anti-nicastrin monoclonal antibodies elicit pleiotropic anti-tumour pharmacological effects in invasive breast cancer cells

Antiproliferative activity and mode of action analysis of novel amino and amido substituted phenantrene and naphtho[2,1-b]thiophene derivatives

Author Correction: Towards a data-integrated cell

Biological function through network topology: a survey of the human diseasome

Biological network comparison using graphlet degree distribution

Biological network comparison using graphlet degree distribution

Bridging the gaps in systems biology

C-GRAAL: common-neighbors-based global GRAph ALignment of biological networks

Characterization of cell cycle specific protein interaction networks of the yeast 26S proteasome complex by the QTAX strategy

Characterization of the proteasome interaction network using a QTAX-based tag-team strategy and protein interaction network analysis

Classification in biological networks with hypergraphlet kernels

Complementarity of network and sequence information in homologous proteins

Critical Review on Zeolite Clinoptilolite Safety and Medical Applications

Discovering disease-disease associations by fusing systems-level molecular data

Dominating biological networks

Drugst.One — a plug-and-play solution for online systems medicine and network-based drug repurposing

Erratum to: Anti-nicastrin monoclonal antibodies elicit pleiotropic anti-tumour pharmacological effects in invasive breast cancer cells.

Fitting a geometric graph to a protein-protein interaction network

From Topology to Phenotype in Protein–Protein Interaction Networks

Functional geometry of protein interactomes

Functional topology in a network of protein interactions

Fuse: multiple network alignment via data fusion

GR-Align: fast and flexible alignment of protein 3D structures using graphlet degree similarity.

Genetic mapping of a leaf rust resistance gene in the former Yugoslavian barley landrace MBR1012

Geometric Local Structure in Biological Networks

Geometric de-noising of protein-protein interaction networks

Geometric evolutionary dynamics of protein interaction networks.

GraphCrunch 2: Software tool for network modeling, alignment and clustering

GraphCrunch: a tool for large network analyses

Graphlet Laplacians for topology-function and topology-disease relationships

Graphlet eigencentralities capture novel central roles of genes in pathways

Graphlet-based Characterization of Directed Networks

Graphlet-based measures are suitable for biological network comparison

Hereditary dominating pair graphs

High-throughput mapping of a dynamic signaling network in mammalian cells

Higher-order molecular organization as a source of biological function

Integration of molecular network data reconstructs Gene Ontology

Integrative methods for analyzing big data in precision medicine

Integrative network alignment reveals large regions of global network similarity in yeast and human

Introduction to the Special Issue on Biological Networks

L-GRAAL: Lagrangian graphlet-based network aligner

Learning the structure of protein-protein interaction networks.

Methods for biological data integration: perspectives and challenges

Modeling interactome: scale-free or geometric?

Modelling protein-protein interaction networks via a stickiness index

Modelling the yeast interactome

NETWORK ANALYSIS. Network analytics in the age of big data

Network topology reveals key cardiovascular disease genes

Network wiring of pleiotropic kinases yields insight into protective role of diabetes on aneurysm

Not all scale-free networks are born equal: the role of the seed graph in PPI network evolution

Omics Data Complementarity Underlines Functional Cross-Communication in Yeast

Optimal network alignment with graphlet degree vectors

Optimized null model for protein structure networks.

PATIENT-SPECIFIC DATA FUSION FOR CANCER STRATIFICATION AND PERSONALISED TREATMENT.

Predicting disease associations via biological network analysis.

Probabilistic graphlets capture biological function in probabilistic molecular networks

Proper evaluation of alignment-free network comparison methods

Protein complex prediction via cost-based clustering

Protein complex prediction with RNSC.

Protein interaction network topology uncovers melanogenesis regulatory network components within functional genomics datasets

Protein‐protein interactions: Making sense of networks via graph‐theoretic modeling ⬇️

Random Graph Models and Their Application to Protein-Protein Interaction Networks

Rebuttal to the Letter to the Editor in response to the paper: proper evaluation of alignment-free network comparison methods.

Revealing the hidden language of complex networks.

Structure of brain functional networks

Survey of network-based approaches to research of cardiovascular diseases

Systematic protein-protein interaction mapping for clinically relevant human GPCRs

Systems-level cancer gene identification from protein interaction network topology applied to melanogenesis-related functional genomics data

The Core Diseasome

The integrated disease network

The role of genes co-amplified with nicastrin in breast invasive carcinoma.

The topology of the growing human interactome data

Topological Characteristics of Molecular Networks

Topological network alignment uncovers biological function and phylogeny

Topology-function conservation in protein-protein interaction networks