Lista de obras - Andra Waagmeester - Dominio Público Uruguay

A protocol for adding knowledge to Wikidata, a case report

scientific article published on 07 April 2020

A protocol for adding knowledge to Wikidata: aligning resources on human coronaviruses ⬇️

artículo científico publicado en 2021

Acknowledging contributions to online expert assistance

Addendum: The FAIR Guiding Principles for scientific data management and stewardship

article by Mark D Wilkinson et al published 19 March 2019 in Scientific Data

Applying linked data approaches to pharmacology: Architectural decisions and implementation ⬇️

artículo científico publicado en 2014

Author Correction: A protocol for adding knowledge to Wikidata: aligning resources on human coronaviruses

artículo científico publicado en 2023

Author response: Wikidata as a knowledge graph for the life sciences

scholarly article, peer review and author response published on 24 January 2020

Biological pathway abstractions: from two-dimensional drawings to multidimensional linked data ⬇️

PhD thesis of 2024 by Dr Andra Waagmeester

ChlamBase: a curated model organism database for the Chlamydia research community.

artículo científico publicado en 2019

Complex Portal 2022: new curation frontiers

artículo científico publicado en 2021

Documenting Biodiversity in Underrepresented Languages using Crowdsourcing

artículo científico publicado en 2023

Documenting Biodiversity in Underrepresented Languages using Crowdsourcing ⬇️

artículo científico publicado en 2023

Enhancement and Reusage of Biomedical Knowledge Graph Subsets

Explicit interaction information from WikiPathways in RDF facilitates drug discovery in the Open PHACTS Discovery Platform

Exposing WikiPathways as Linked Open Data

FAIR Principles: Interpretations and Implementation Considerations

scholarly article

Fairmetrics/Metrics: Proposed Fair Metrics And Results Of The Metrics Evaluation Questionnaire

artículo científico publicado en 2018

Identifying sigma factors in Mycobacterium smegmatis by comparative genomic analysis

artículo científico publicado en 2005

Linking Data and Descriptions on Moths Using the Wikimedia Ecosystem ⬇️

conference abstract

Measuring impact in online resources with the CInumber (the CitedIn Number for online impact)

Nature Europe site should highlight most productive countries.

artículo científico publicado en 2010

Participative Decision Making and the Sharing of Benefits: Laws, ethics, and data protection for building extended global communities

artículo científico publicado en 2021

Pathway enrichment based on text mining and its validation on carotenoid and vitamin A metabolism

artículo científico publicado en 2009

Preface ⬇️

Rendering co-author graphs using linked-open-data from Wikidata

Scientific Lenses to Support Multiple Views over Linked Chemistry Data ⬇️

artículo científico publicado en 2014

Shape Expressions (ShEx) in Wikidata

Ten quick tips for editing Wikidata ⬇️

artículo científico publicado en 2023

Ten simple rules for creating reusable pathway models for computational analysis and visualization

artículo científico

The ChEMBL database as linked open data

artículo científico publicado en 2013

The Distinction between Linguistic and Conceptual Semantics in Medical Terminology and its Implication for NLP-Based Knowledge Acquisition

artículo científico publicado en 1998

The FAIR Guiding Principles for scientific data management and stewardship

artículo científico publicado en 2016

The application of the open pharmacological concepts triple store (Open PHACTS) to support drug discovery research

artículo científico publicado en 2014

The distinction between linguistic and conceptual semantics in medical terminology and its implication for NLP-based knowledge acquisition.

artículo científico publicado en 1998

The public road to high-quality curated biological pathways

artículo científico publicado en 2008

The role of bioinformatics in pathway curation

artículo científico publicado en 2008

Understanding signaling and metabolic paths using semantified and harmonized information about biological interactions

artículo científico publicado en 2022

Using Crowd-sourcing Platforms to Increase and Spread Knowledge on the Biodiversity in Sub-Saharan Africa

artículo científico publicado en 2022

Using Shape Expressions (ShEx) to Share RDF Data Models and to Guide Curation with Rigorous Validation

artículo científico publicado en 2018

Using the Semantic Web for Rapid Integration of WikiPathways with Other Biological Online Data Resources

artículo científico publicado en 2016

WikiCite: Citations needed for the sum of all human knowledge

Wikimania 2017 talk

WikiPathways 2024: next generation pathway database

artículo científico publicado en 2023

WikiPathways: a multifaceted pathway database bridging metabolomics to other omics research

artículo científico publicado en 2017

WikiPathways: capturing the full diversity of pathway knowledge

artículo científico

WikiPathways: connecting communities ⬇️

artículo científico publicado en 2020

Wikidata as a FAIR knowledge graph for the life sciences

scholarly article posted as a preprint in BioRxiv on 11 February 2020

Wikidata as a knowledge graph for the life sciences ⬇️

artículo científico publicado en 2020

Wikidata as a semantic framework for the Gene Wiki initiative

bioRxiv preprint

Wikidata subsetting: Approaches, tools, and evaluation

Centralizing content and distributing labor: a community model for curating the very long tail of microbial genomes

artículo científico publicado en 2015

Knowledge graphs and wikidata subsetting

scholarly article by José Emilio Labra Gayo published in April 2021

Linking Wikidata to the Rest of the Semantic Web ⬇️

scientific article (publication date: 19 February 2017)

Opportunities and challenges presented by Wikidata in the context of biocuration ⬇️

artículo científico publicado en 2016

Using Crowd-curation to Improve Taxon Annotations on the Wikimedia Infrastructure

artículo científico publicado en 2019

Using Shape Expressions (ShEx) to Share RDF Data Models and to Guide Curation with Rigorous Validation ⬇️

artículo científico publicado en 2019

WikiGenomes: an open Web application for community consumption and curation of gene annotation data in Wikidata ⬇️

artículo científico publicado en 2017

Wikidata as a linked-data hub for Biodiversity data

artículo científico publicado en 2019

Wikidata as a semantic framework for the gene wiki initiative ⬇️

artículo científico publicado en 2016

Wikidata as an intuitive resource towards semantic data modeling in data FAIRification ⬇️

scholarly article by Annika Jacobsen published in December 2018

Wikidata: A platform for data integration and dissemination for the life sciences and beyond ⬇️

artículo científico publicado en 2015

Lista de obras de Andra Waagmeester

A protocol for adding knowledge to Wikidata, a case report

A protocol for adding knowledge to Wikidata: aligning resources on human coronaviruses ⬇️

Acknowledging contributions to online expert assistance

Acknowledging contributions to online expert assistance

Acknowledging contributions to online expert assistance

Addendum: The FAIR Guiding Principles for scientific data management and stewardship

Applying linked data approaches to pharmacology: Architectural decisions and implementation ⬇️

Author Correction: A protocol for adding knowledge to Wikidata: aligning resources on human coronaviruses

Author response: Wikidata as a knowledge graph for the life sciences

Biological pathway abstractions: from two-dimensional drawings to multidimensional linked data ⬇️

ChlamBase: a curated model organism database for the Chlamydia research community.

Complex Portal 2022: new curation frontiers

Documenting Biodiversity in Underrepresented Languages using Crowdsourcing

Documenting Biodiversity in Underrepresented Languages using Crowdsourcing ⬇️

Enhancement and Reusage of Biomedical Knowledge Graph Subsets

Explicit interaction information from WikiPathways in RDF facilitates drug discovery in the Open PHACTS Discovery Platform

Explicit interaction information from WikiPathways in RDF facilitates drug discovery in the Open PHACTS Discovery Platform

Exposing WikiPathways as Linked Open Data

FAIR Principles: Interpretations and Implementation Considerations

Fairmetrics/Metrics: Proposed Fair Metrics And Results Of The Metrics Evaluation Questionnaire

Identifying sigma factors in Mycobacterium smegmatis by comparative genomic analysis

Linking Data and Descriptions on Moths Using the Wikimedia Ecosystem ⬇️

Measuring impact in online resources with the CInumber (the CitedIn Number for online impact)

Nature Europe site should highlight most productive countries.

Participative Decision Making and the Sharing of Benefits: Laws, ethics, and data protection for building extended global communities

Pathway enrichment based on text mining and its validation on carotenoid and vitamin A metabolism

Preface ⬇️

Rendering co-author graphs using linked-open-data from Wikidata

Scientific Lenses to Support Multiple Views over Linked Chemistry Data ⬇️

Shape Expressions (ShEx) in Wikidata

Ten quick tips for editing Wikidata ⬇️

Ten simple rules for creating reusable pathway models for computational analysis and visualization

The ChEMBL database as linked open data

The Distinction between Linguistic and Conceptual Semantics in Medical Terminology and its Implication for NLP-Based Knowledge Acquisition

The FAIR Guiding Principles for scientific data management and stewardship

The application of the open pharmacological concepts triple store (Open PHACTS) to support drug discovery research

The distinction between linguistic and conceptual semantics in medical terminology and its implication for NLP-based knowledge acquisition.

The public road to high-quality curated biological pathways

The role of bioinformatics in pathway curation

Understanding signaling and metabolic paths using semantified and harmonized information about biological interactions

Using Crowd-sourcing Platforms to Increase and Spread Knowledge on the Biodiversity in Sub-Saharan Africa

Using Shape Expressions (ShEx) to Share RDF Data Models and to Guide Curation with Rigorous Validation

Using the Semantic Web for Rapid Integration of WikiPathways with Other Biological Online Data Resources

WikiCite: Citations needed for the sum of all human knowledge

WikiPathways 2024: next generation pathway database

WikiPathways: a multifaceted pathway database bridging metabolomics to other omics research

WikiPathways: capturing the full diversity of pathway knowledge

WikiPathways: connecting communities ⬇️

Wikidata as a FAIR knowledge graph for the life sciences

Wikidata as a knowledge graph for the life sciences ⬇️

Wikidata as a semantic framework for the Gene Wiki initiative

Wikidata subsetting: Approaches, tools, and evaluation

Centralizing content and distributing labor: a community model for curating the very long tail of microbial genomes

Knowledge graphs and wikidata subsetting

Linking Wikidata to the Rest of the Semantic Web ⬇️

Opportunities and challenges presented by Wikidata in the context of biocuration ⬇️

Using Crowd-curation to Improve Taxon Annotations on the Wikimedia Infrastructure

Using Shape Expressions (ShEx) to Share RDF Data Models and to Guide Curation with Rigorous Validation ⬇️

WikiGenomes: an open Web application for community consumption and curation of gene annotation data in Wikidata ⬇️

Wikidata as a linked-data hub for Biodiversity data

Wikidata as a semantic framework for the gene wiki initiative ⬇️

Wikidata as an intuitive resource towards semantic data modeling in data FAIRification ⬇️

Wikidata: A platform for data integration and dissemination for the life sciences and beyond ⬇️