Lista de obras - Julia Bailey-Serres - Dominio Público Uruguay

A variable cluster of ethylene response factor-like genes regulates metabolic and developmental acclimation responses to submergence in rice

artículo científico publicado en 2006

Acidic Phosphoprotein Complex of the 60S Ribosomal Subunit of Maize Seedling Roots (Components and Changes in Response to Flooding) ⬇️

artículo científico publicado el 1 de agosto de 1997

Analysis of Ribosome-Associated mRNAs in Rice Reveals the Importance of Transcript Size and GC Content in Translation

artículo científico publicado en 2016

Annotating genes of known and unknown function by large-scale coexpression analysis

artículo científico

Bioorthogonal Noncanonical Amino Acid Tagging (BONCAT) Enables Time-Resolved Analysis of Protein Synthesis in Native Plant Tissue.

artículo científico publicado en 2017

Both 5' and 3' sequences of maize adh1 mRNA are required for enhanced translation under low-oxygen conditions

artículo científico publicado en 1996

Characteristics and significance of intergenic polyadenylated RNA transcription in Arabidopsis

artículo científico publicado en 2012

Characterization of distinct root and shoot responses to low-oxygen stress in Arabidopsis with a focus on primary C- and N-metabolism

artículo científico publicado en 2014

Co-operation between cytosolic and plastidic oxidative pentose phosphate pathways revealed by 6-phosphogluconate dehydrogenase-deficient genotypes of maize

artículo científico publicado en 1998

Cold shock protein 1 chaperones mRNAs during translation in Arabidopsis thaliana

artículo científico

Comparison of GC-MS and NMR for metabolite profiling of rice subjected to submergence stress

artículo científico publicado en 2012

Conserved and nuanced hierarchy of gene regulatory response to hypoxia

scientific article published on 18 January 2020

Cross-kingdom comparison of transcriptomic adjustments to low-oxygen stress highlights conserved and plant-specific responses

artículo científico publicado en 2010

DHH1/DDX6-like RNA helicases maintain ephemeral half-lives of stress-response mRNAs

scientific article published on 01 June 2020

Differential mRNA translation contributes to gene regulation under non-stress and dehydration stress conditions in Arabidopsis thaliana

artículo científico publicado en 2004

Differential metabolic regulation governed by the rice SUB1A gene during submergence stress and identification of alanylglycine by 1H NMR spectroscopy

artículo científico publicado en 2011

Ethylene-mediated nitric oxide depletion pre-adapts plants to hypoxia stress

scientific article published on 05 September 2019

Ethylene—A key regulator of submergence responses in rice

article

Evaluation of Translational Control Mechanisms in Response to Oxygen Deprivation in Maize

Evolutionary analyses of the 12-kDa acidic ribosomal P-proteins reveal a distinct protein of higher plant ribosomes

artículo científico publicado en 1998

Evolutionary analysis of the Sub1 gene cluster that confers submergence tolerance to domesticated rice

scientific article published on 29 September 2008

Evolutionary flexibility in flooding response circuitry in angiosperms

scientific article published on 01 September 2019

Expression and distribution of cytosolic 6-phosphogluconate dehydrogenase isozymes in maize

artículo científico publicado en 1992

Expression of rice SUB1A and SUB1C transcription factors in Arabidopsis uncovers flowering inhibition as a submergence tolerance mechanism.

artículo científico publicado en 2011

Eyes off transcription! The wonderful world of post-transcriptional regulation.

artículo científico publicado en 1997

Flood resilience loci SUBMERGENCE 1 and ANAEROBIC GERMINATION 1 interact in seedlings established underwater

artículo científico publicado en 2020

Flooding stress: acclimations and genetic diversity

scientific article published on January 2008

Flooding tolerance: O2 sensing and survival strategies.

artículo científico

Gene and enhancer trap transposable elements reveal oxygen deprivation-regulated genes and their complex patterns of expression in Arabidopsis

artículo científico publicado en 2003

Genome cluster database. A sequence family analysis platform for Arabidopsis and rice

artículo científico

Genome-wide Analysis of Transcript Abundance and Translation in Arabidopsis Seedlings Subjected to Oxygen Deprivation.

artículo científico publicado en 2005

Genome-wide analysis of transcript abundance and translation in Arabidopsis seedlings subjected to oxygen deprivation

artículo científico publicado en 2005

Getting the message across: cytoplasmic ribonucleoprotein complexes

artículo científico publicado en 2009

Hairy root transformation using Agrobacterium rhizogenes as a tool for exploring cell type-specific gene expression and function using tomato as a model.

artículo científico publicado en 2014

Homeostatic response to hypoxia is regulated by the N-end rule pathway in plants

artículo científico publicado en 2011

Hypoxic stress-induced changes in ribosomes of maize seedling roots.

artículo científico publicado en 1990

Immunopurification of polyribosomal complexes of Arabidopsis for global analysis of gene expression

artículo científico publicado en 2005

Integrated multiomic analysis from chromatin to translation of stimulus-regulated gene activity exposes dominant patterns of nuclear-level control

article

Integrative Analysis from the Epigenome to Translatome Uncovers Patterns of Dominant Nuclear Regulation during Transient Stress

artículo científico publicado en 2019

Isolation and analysis of mRNAs from specific cell types of plants by ribosome immunopurification

artículo científico publicado en 2013

Life in the balance: a signaling network controlling survival of flooding ⬇️

artículo científico publicado el 31 de agosto de 2010

Lighting the shadows: methods that expose nuclear and cytoplasmic gene regulatory control

artículo científico publicado en 2017

Linking genes of unknown function with abiotic stress responses by high-throughput phenotype screening

article

Making sense of low oxygen sensing

artículo científico publicado en 2012

Microgenomics: genome-scale, cell-specific monitoring of multiple gene regulation tiers

artículo científico

Molecular characterization of the submergence response of the Arabidopsis thaliana ecotype Columbia.

artículo científico publicado en 2011

Natural variation of submergence tolerance among Arabidopsis thaliana accessions

scientific article published on 25 November 2010

Noncanonical Alternative Polyadenylation Contributes to Gene Regulation in Response to Hypoxia

artículo científico publicado en 2017

Nuclear transcriptomes at high resolution using retooled INTACT

Nuclear transcriptomes at high resolution using retooled INTACT.

artículo científico publicado en 2017

Nuclear-mitochondrial interactions in cytoplasmic male-sterile sorghum

artículo científico publicado en 1986

Nucleotide sequence of a cDNA for the maize protein synthesis initiation factor 4A.

artículo científico publicado en 1995

Oxygen deprivation stimulates Ca2+-mediated phosphorylation of mRNA cap-binding protein eIF4E in maize roots.

artículo científico publicado en 1999

Ozone-Induced Alterations in the Accumulation of Newly Synthesized Proteins in Leaves of Maize.

artículo científico publicado en 1995

Plant biology: Genetics of high-rise rice.

artículo científico publicado en 2009

Plant responses to hypoxia--is survival a balancing act?

artículo científico publicado en 2004

Plant tolerance of flooding stress--recent advances.

artículo científico publicado en 2014

Plants, their organelles, viruses and transgenes reveal the mechanisms and relevance of post-transcriptional processes. Leysin, VD, Switzerland, February 25-28, 1999

artículo científico publicado en 1999

Polysomes, stress granules and processing bodies: a dynamic triumvirate controlling cytoplasmic mRNA fate and function

artículo científico publicado en 2017

Posttranscriptional control of photosynthetic mRNA decay under stress conditions requires 3' and 5' untranslated regions and correlates with differential polysome association in rice

artículo científico publicado en 2012

Profiling of accessible chromatin regions across multiple plant species and cell types reveals common gene regulatory principles and new control modules.

artículo científico publicado en 2017

Profiling of translatomes of in vivo-grown pollen tubes reveals genes with roles in micropylar guidance during pollination in Arabidopsis

article

Profiling translatomes of discrete cell populations resolves altered cellular priorities during hypoxia in Arabidopsis.

artículo científico publicado en 2009

Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes

artículo científico publicado en 2005

Pummelo fruit transcript homologous to ripening-induced genes.

artículo científico publicado en 1995

RNase Activities Are Reduced Concomitantly with Conservation of Total Cellular RNA and Ribosomes in O2-Deprived Seedling Roots of Maize.

artículo científico publicado en 1997

Redundant ERF-VII Transcription Factors Bind to an Evolutionarily Conserved cis-Motif to Regulate Hypoxia-Responsive Gene Expression in Arabidopsis.

artículo científico publicado en 2015

Regulated heterogeneity in 12-kDa P-protein phosphorylation and composition of ribosomes in maize (Zea mays L.).

artículo científico publicado en 2001

Regulated phosphorylation of 40S ribosomal protein S6 in root tips of maize

artículo científico publicado en 2003

Regulation of translational initiation in plants.

artículo científico publicado en 2002

Reprogramming of Root Cells during Nitrogen-Fixing Symbiosis Involves Dynamic Polysome Association of Coding and Noncoding RNAs

artículo científico publicado en 2019

Rice SUB1A constrains remodelling of the transcriptome and metabolome during submergence to facilitate post-submergence recovery.

artículo científico publicado en 2017

RopGAP4-dependent Rop GTPase rheostat control of Arabidopsis oxygen deprivation tolerance

artículo científico publicado en 2002

Selective mRNA sequestration by OLIGOURIDYLATE-BINDING PROTEIN 1 contributes to translational control during hypoxia in Arabidopsis

artículo científico publicado en 2014

Selective mRNA translation coordinates energetic and metabolic adjustments to cellular oxygen deprivation and reoxygenation in Arabidopsis thaliana

artículo científico publicado en 2008

Selective recruitment of mRNAs and miRNAs to polyribosomes in response to rhizobia infection in Medicago truncatula

artículo científico publicado en 2012

Sensing and signalling in response to oxygen deprivation in plants and other organisms

artículo científico publicado en 2005

Size distributions of circular molecules in plant mitochondrial DNAs

artículo científico publicado en 1987

Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice

artículo científico publicado en 2006

Submergence Tolerant Rice: SUB1’s Journey from Landrace to Modern Cultivar

Submergence tolerance conferred by Sub1A is mediated by SLR1 and SLRL1 restriction of gibberellin responses in rice

artículo científico publicado en 2008

Synonymous codon usage in Zea mays L. nuclear genes is varied by levels of C and G-ending codons.

artículo científico publicado en 1993

The Arabidopsis translatome cell-specific mRNA atlas

The Dynamic Kaleidoscope of RNA Biology in Plants

scientific article published on 01 January 2020

The Next Generation of Training for Arabidopsis Researchers: Bioinformatics and Quantitative Biology.

artículo científico publicado en 2017

The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome.

artículo científico publicado en 2001

The roles of reactive oxygen species in plant cells

article

The submergence tolerance gene SUB1A delays leaf senescence under prolonged darkness through hormonal regulation in rice

artículo científico publicado en 2012

The submergence tolerance regulator SUB1A mediates crosstalk between submergence and drought tolerance in rice

artículo científico publicado en 2011

The submergence tolerance regulator Sub1A mediates stress-responsive expression of AP2/ERF transcription factors

artículo científico publicado en 2010

Transcriptional and post-transcriptional processes regulate gene expression in oxygen-deprived roots of maize

artículo científico publicado en 1998

Transcriptomes of Eight Arabidopsis thaliana Accessions Reveal Core Conserved, Genotype- and Organ-Specific Responses to Flooding Stress.

artículo científico publicado en 2016

Transient MPK6 activation in response to oxygen deprivation and reoxygenation is mediated by mitochondria and aids seedling survival in Arabidopsis

artículo científico publicado en 2011

Translational dynamics revealed by genome-wide profiling of ribosome footprints in Arabidopsis

artículo científico publicado en 2013

Two Rumex species from contrasting hydrological niches regulate flooding tolerance through distinct mechanisms.

artículo científico publicado en 2013

Unraveling the tapestry of networks involving reactive oxygen species in plants

artículo científico publicado en 2008

Waterproofing crops: effective flooding survival strategies

artículo científico publicado en 2012

What makes species unique? The contribution of proteins with obscure features

artículo científico publicado en 2006

mRNA sequence features that contribute to translational regulation in Arabidopsis

artículo científico publicado en 2005

Lista de obras de Julia Bailey-Serres

A variable cluster of ethylene response factor-like genes regulates metabolic and developmental acclimation responses to submergence in rice

Acidic Phosphoprotein Complex of the 60S Ribosomal Subunit of Maize Seedling Roots (Components and Changes in Response to Flooding) ⬇️

Analysis of Ribosome-Associated mRNAs in Rice Reveals the Importance of Transcript Size and GC Content in Translation

Annotating genes of known and unknown function by large-scale coexpression analysis

Bioorthogonal Noncanonical Amino Acid Tagging (BONCAT) Enables Time-Resolved Analysis of Protein Synthesis in Native Plant Tissue.

Both 5' and 3' sequences of maize adh1 mRNA are required for enhanced translation under low-oxygen conditions

Characteristics and significance of intergenic polyadenylated RNA transcription in Arabidopsis

Characterization of distinct root and shoot responses to low-oxygen stress in Arabidopsis with a focus on primary C- and N-metabolism

Co-operation between cytosolic and plastidic oxidative pentose phosphate pathways revealed by 6-phosphogluconate dehydrogenase-deficient genotypes of maize

Cold shock protein 1 chaperones mRNAs during translation in Arabidopsis thaliana

Comparison of GC-MS and NMR for metabolite profiling of rice subjected to submergence stress

Conserved and nuanced hierarchy of gene regulatory response to hypoxia

Cross-kingdom comparison of transcriptomic adjustments to low-oxygen stress highlights conserved and plant-specific responses

DHH1/DDX6-like RNA helicases maintain ephemeral half-lives of stress-response mRNAs

Differential mRNA translation contributes to gene regulation under non-stress and dehydration stress conditions in Arabidopsis thaliana

Differential metabolic regulation governed by the rice SUB1A gene during submergence stress and identification of alanylglycine by 1H NMR spectroscopy

Ethylene-mediated nitric oxide depletion pre-adapts plants to hypoxia stress

Ethylene—A key regulator of submergence responses in rice

Evaluation of Translational Control Mechanisms in Response to Oxygen Deprivation in Maize

Evolutionary analyses of the 12-kDa acidic ribosomal P-proteins reveal a distinct protein of higher plant ribosomes

Evolutionary analysis of the Sub1 gene cluster that confers submergence tolerance to domesticated rice

Evolutionary flexibility in flooding response circuitry in angiosperms

Expression and distribution of cytosolic 6-phosphogluconate dehydrogenase isozymes in maize

Expression of rice SUB1A and SUB1C transcription factors in Arabidopsis uncovers flowering inhibition as a submergence tolerance mechanism.

Eyes off transcription! The wonderful world of post-transcriptional regulation.

Flood resilience loci SUBMERGENCE 1 and ANAEROBIC GERMINATION 1 interact in seedlings established underwater

Flooding stress: acclimations and genetic diversity

Flooding tolerance: O2 sensing and survival strategies.

Gene and enhancer trap transposable elements reveal oxygen deprivation-regulated genes and their complex patterns of expression in Arabidopsis

Genome cluster database. A sequence family analysis platform for Arabidopsis and rice

Genome-wide Analysis of Transcript Abundance and Translation in Arabidopsis Seedlings Subjected to Oxygen Deprivation.

Genome-wide analysis of transcript abundance and translation in Arabidopsis seedlings subjected to oxygen deprivation

Getting the message across: cytoplasmic ribonucleoprotein complexes

Hairy root transformation using Agrobacterium rhizogenes as a tool for exploring cell type-specific gene expression and function using tomato as a model.

Homeostatic response to hypoxia is regulated by the N-end rule pathway in plants

Hypoxic stress-induced changes in ribosomes of maize seedling roots.

Immunopurification of polyribosomal complexes of Arabidopsis for global analysis of gene expression

Integrated multiomic analysis from chromatin to translation of stimulus-regulated gene activity exposes dominant patterns of nuclear-level control

Integrative Analysis from the Epigenome to Translatome Uncovers Patterns of Dominant Nuclear Regulation during Transient Stress

Isolation and analysis of mRNAs from specific cell types of plants by ribosome immunopurification

Life in the balance: a signaling network controlling survival of flooding ⬇️

Lighting the shadows: methods that expose nuclear and cytoplasmic gene regulatory control

Linking genes of unknown function with abiotic stress responses by high-throughput phenotype screening

Making sense of low oxygen sensing

Microgenomics: genome-scale, cell-specific monitoring of multiple gene regulation tiers

Molecular characterization of the submergence response of the Arabidopsis thaliana ecotype Columbia.

Natural variation of submergence tolerance among Arabidopsis thaliana accessions

Noncanonical Alternative Polyadenylation Contributes to Gene Regulation in Response to Hypoxia

Nuclear transcriptomes at high resolution using retooled INTACT

Nuclear transcriptomes at high resolution using retooled INTACT.

Nuclear-mitochondrial interactions in cytoplasmic male-sterile sorghum

Nucleotide sequence of a cDNA for the maize protein synthesis initiation factor 4A.

Oxygen deprivation stimulates Ca2+-mediated phosphorylation of mRNA cap-binding protein eIF4E in maize roots.

Ozone-Induced Alterations in the Accumulation of Newly Synthesized Proteins in Leaves of Maize.

Plant biology: Genetics of high-rise rice.

Plant responses to hypoxia--is survival a balancing act?

Plant tolerance of flooding stress--recent advances.

Plants, their organelles, viruses and transgenes reveal the mechanisms and relevance of post-transcriptional processes. Leysin, VD, Switzerland, February 25-28, 1999

Polysomes, stress granules and processing bodies: a dynamic triumvirate controlling cytoplasmic mRNA fate and function

Posttranscriptional control of photosynthetic mRNA decay under stress conditions requires 3' and 5' untranslated regions and correlates with differential polysome association in rice

Profiling of accessible chromatin regions across multiple plant species and cell types reveals common gene regulatory principles and new control modules.

Profiling of translatomes of in vivo-grown pollen tubes reveals genes with roles in micropylar guidance during pollination in Arabidopsis

Profiling translatomes of discrete cell populations resolves altered cellular priorities during hypoxia in Arabidopsis.

Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes

Pummelo fruit transcript homologous to ripening-induced genes.

RNase Activities Are Reduced Concomitantly with Conservation of Total Cellular RNA and Ribosomes in O2-Deprived Seedling Roots of Maize.

Redundant ERF-VII Transcription Factors Bind to an Evolutionarily Conserved cis-Motif to Regulate Hypoxia-Responsive Gene Expression in Arabidopsis.

Regulated heterogeneity in 12-kDa P-protein phosphorylation and composition of ribosomes in maize (Zea mays L.).

Regulated phosphorylation of 40S ribosomal protein S6 in root tips of maize

Regulation of translational initiation in plants.

Reprogramming of Root Cells during Nitrogen-Fixing Symbiosis Involves Dynamic Polysome Association of Coding and Noncoding RNAs

Rice SUB1A constrains remodelling of the transcriptome and metabolome during submergence to facilitate post-submergence recovery.

RopGAP4-dependent Rop GTPase rheostat control of Arabidopsis oxygen deprivation tolerance

Selective mRNA sequestration by OLIGOURIDYLATE-BINDING PROTEIN 1 contributes to translational control during hypoxia in Arabidopsis

Selective mRNA translation coordinates energetic and metabolic adjustments to cellular oxygen deprivation and reoxygenation in Arabidopsis thaliana

Selective recruitment of mRNAs and miRNAs to polyribosomes in response to rhizobia infection in Medicago truncatula

Sensing and signalling in response to oxygen deprivation in plants and other organisms

Size distributions of circular molecules in plant mitochondrial DNAs

Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice