Lista de obras - Dana Pe'er - Dominio Público Uruguay

A Single-cell Atlas of the Human Healthy Airways

artículo científico publicado en 2020

Adult Human Glioblastomas Harbor Radial Glia-like Cells

scientific article published on 30 January 2020

Adult Human Glioblastomas Harbor Radial Glia-like Cells

scientific article published on 01 July 2020

An Immune Atlas of Clear Cell Renal Cell Carcinoma

artículo científico publicado en 2017

An integrated approach to uncover drivers of cancer.

artículo científico publicado en 2010

An integrated cell atlas of the lung in health and disease

Author Correction: Characterization of cell fate probabilities in single-cell data with Palantir

scientific article published on 01 October 2019

Bayesian network analysis of signaling networks: a primer

artículo científico publicado en 2005

Broadening horizons: holistic viewpoints from the Biology of Genomes

artículo científico publicado en 2014

CD49b defines functionally mature Treg cells that survey skin and vascular tissues

article

Cancer cells deploy lipocalin-2 to collect limiting iron in leptomeningeal metastasis

scientific article published on 01 July 2020

CellRank for directed single-cell fate mapping

artículo científico publicado en 2022

Characterization of cell fate probabilities in single-cell data with Palantir

scientific article published on 21 March 2019

Chromosomal instability drives metastasis through a cytosolic DNA response

artículo científico publicado en 2018

Cohesin Members Stag1 and Stag2 Display Distinct Roles in Chromatin Accessibility and Topological Control of HSC Self-Renewal and Differentiation

scientific article published on 05 September 2019

Combination anti-CTLA-4 plus anti-PD-1 checkpoint blockade utilizes cellular mechanisms partially distinct from monotherapies

scientific article published on 21 October 2019

Concurrent RB1 and TP53 Alterations Define a Subset of EGFR-Mutant Lung Cancers at risk for Histologic Transformation and Inferior Clinical Outcomes

scientific article published on 19 June 2019

Context Sensitive Modeling of Cancer Drug Sensitivity

artículo científico publicado en 2015

Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis

artículo científico publicado en 2015

Detection of minimal residual disease in B lymphoblastic leukemia using viSNE.

artículo científico publicado en 2015

Dirichlet Process Mixture Model for Correcting Technical Variation in Single-Cell Gene Expression Data

artículo científico publicado en 2016

Distinct Cellular Mechanisms Underlie Anti-CTLA-4 and Anti-PD-1 Checkpoint Blockade

artículo científico publicado en 2017

Engineering γδT cells limits tonic signaling associated with chimeric antigen receptors

scientific article published on 10 September 2019

Environmental stresses disrupt telomere length homeostasis

artículo científico publicado en 2013

Epigenetic plasticity cooperates with cell-cell interactions to direct pancreatic tumorigenesis

artículo científico publicado en 2023

Epigenomic-Guided Mass Cytometry Profiling Reveals Disease-Specific Features of Exhausted CD8 T Cells

scientific article published on 01 May 2018

Frontiers in cancer immunotherapy-a symposium report

artículo científico publicado en 2020

Fully defined human pluripotent stem cell-derived microglia and tri-culture system model C3 production in Alzheimer's disease

artículo científico publicado en 2021

Functional Genomic Landscape of Human Breast Cancer Drivers, Vulnerabilities, and Resistance

artículo científico publicado en 2016

Genotype-environment interactions reveal causal pathways that mediate genetic effects on phenotype

artículo científico publicado en 2013

Harnessing gene expression to identify the genetic basis of drug resistance

artículo científico publicado en 2009

High-resolution analysis of DNA regulatory elements by synthetic saturation mutagenesis

artículo científico publicado en 2009

Highly multiplexed profiling of single-cell effector functions reveals deep functional heterogeneity in response to pathogenic ligands

artículo científico publicado en 2015

Identifying regulatory mechanisms using individual variation reveals key role for chromatin modification

artículo científico publicado en 2006

Immune profiling of human tumors identifies CD73 as a combinatorial target in glioblastoma

artículo científico publicado en 2019

Inference of modules associated to eQTLs ⬇️

artículo científico publicado el 24 de marzo de 2012

Innate Immune Landscape in Early Lung Adenocarcinoma by Paired Single-Cell Analyses.

artículo científico publicado en 2017

Integration of genomic data enables selective discovery of breast cancer drivers.

artículo científico publicado en 2014

Interferon α/β Enhances the Cytotoxic Response of MEK Inhibition in Melanoma

artículo científico publicado en 2015

JISTIC: identification of significant targets in cancer.

artículo científico publicado en 2010

L1CAM defines the regenerative origin of metastasis-initiating cells in colorectal cancer

artículo científico publicado en 2020

Learning a prior on regulatory potential from eQTL data

artículo científico publicado en 2009

Learning signaling network structures with sparsely distributed data

artículo científico publicado en 2009

Lineage plasticity in cancer: a shared pathway of therapeutic resistance

artículo científico publicado en 2020

MITI minimum information guidelines for highly multiplexed tissue images

scientific article published on 01 March 2022

Mapping differentiation under mixed culture conditions reveals a tunable continuum of T cell fates

artículo científico publicado en 2013

Measuring Signaling and RNA-Seq in the Same Cell Links Gene Expression to Dynamic Patterns of NF-κB Activation.

artículo científico publicado en 2017

Minreg: inferring an active regulator set.

artículo científico publicado en 2002

Modularity and interactions in the genetics of gene expression

scholarly article

Modulatory profiling identifies mechanisms of small molecule-induced cell death.

artículo científico publicado en 2011

NFkB disrupts tissue polarity in 3D by preventing integration of microenvironmental signals

artículo científico publicado en 2013

Natural Genetic Variation Reveals Key Features of Epigenetic and Transcriptional Memory in Virus-Specific CD8 T Cells

scientific article published on 23 April 2019

Negative Co-stimulation Constrains T Cell Differentiation by Imposing Boundaries on Possible Cell States

artículo científico publicado en 2019

Normalization of mass cytometry data with bead standards

artículo científico publicado en 2013

Notch3 signaling promotes tumor cell adhesion and progression in a murine epithelial ovarian cancer model

artículo científico publicado en 2020

PD-1 Blockade Expands Intratumoral Memory T Cells

artículo científico publicado en 2016

Palladium-based mass tag cell barcoding with a doublet-filtering scheme and single-cell deconvolution algorithm

artículo científico publicado en 2015

PhenoGraph and viSNE Facilitate the Identification of Abnormal T-Cell Populations in Routine Clinical Flow Cytometric Data

artículo científico

Principles and strategies for developing network models in cancer

artículo científico publicado en 2011

Publisher Correction: Lineage plasticity in cancer: a shared pathway of therapeutic resistance

artículo científico publicado en 2020

RHPN2 drives mesenchymal transformation in malignant glioma by triggering RhoA activation

artículo científico publicado en 2013

Radiotherapy orchestrates natural killer cell dependent antitumor immune responses through CXCL8

artículo científico publicado en 2022

Recovering Gene Interactions from Single-Cell Data Using Data Diffusion

scientific article published on 28 June 2018

Regenerative lineages and immune-mediated pruning in lung cancer metastasis

artículo científico publicado en 2020

Regenerative potential of prostate luminal cells revealed by single-cell analysis

artículo científico publicado en 2020

Scalable microfluidics for single-cell RNA printing and sequencing

artículo científico publicado en 2015

Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment

artículo científico publicado en 2018

Single-Cell Transcriptomics Reveals Early Emergence of Liver Parenchymal and Non-parenchymal Cell Lineages

scientific article published on 01 October 2020

Single-cell mass cytometry of TCR signaling: amplification of small initial differences results in low ERK activation in NOD mice

artículo científico publicado en 2014

Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum

artículo científico publicado en 2011

Single-cell trajectory detection uncovers progression and regulatory coordination in human B cell development

artículo científico publicado en 2014

Systems biology. Conditional density-based analysis of T cell signaling in single-cell data

artículo científico publicado en 2014

The Human Cell Atlas

artículo científico publicado en 2017

The Human Cell Atlas

The Human Cell Atlas White Paper ⬇️

artículo científico publicado en 2018

The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution

scientific article published on 01 April 2020

The emergent landscape of the mouse gut endoderm at single-cell resolution

scientific article published on 08 April 2019

The miR-424(322)/503 cluster orchestrates remodeling of the epithelium in the involuting mammary gland.

artículo científico publicado en 2014

Toward understanding and exploiting tumor heterogeneity

artículo científico publicado en 2015

Trajectories of cell-cycle progression from fixed cell populations

artículo científico publicado en 2015

Transcriptional Basis of Mouse and Human Dendritic Cell Heterogeneity

scientific article published on 24 October 2019

Tumor Analyses Reveal Squamous Transformation and Off-Target Alterations As Early Resistance Mechanisms to First-line Osimertinib in EGFR-Mutant Lung Cancer

artículo científico publicado en 2020

Using Bayesian networks to analyze expression data

Using systems and structure biology tools to dissect cellular phenotypes

artículo científico publicado en 2011

Wishbone identifies bifurcating developmental trajectories from single-cell data

artículo científico publicado en 2016

viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia

artículo científico publicado en 2013

Lista de obras de Dana Pe'er

A Single-cell Atlas of the Human Healthy Airways

Adult Human Glioblastomas Harbor Radial Glia-like Cells

Adult Human Glioblastomas Harbor Radial Glia-like Cells

An Immune Atlas of Clear Cell Renal Cell Carcinoma

An integrated approach to uncover drivers of cancer.

An integrated cell atlas of the lung in health and disease

Author Correction: Characterization of cell fate probabilities in single-cell data with Palantir

Bayesian network analysis of signaling networks: a primer

Broadening horizons: holistic viewpoints from the Biology of Genomes

CD49b defines functionally mature Treg cells that survey skin and vascular tissues

Cancer cells deploy lipocalin-2 to collect limiting iron in leptomeningeal metastasis

CellRank for directed single-cell fate mapping

Characterization of cell fate probabilities in single-cell data with Palantir

Chromosomal instability drives metastasis through a cytosolic DNA response

Cohesin Members Stag1 and Stag2 Display Distinct Roles in Chromatin Accessibility and Topological Control of HSC Self-Renewal and Differentiation

Combination anti-CTLA-4 plus anti-PD-1 checkpoint blockade utilizes cellular mechanisms partially distinct from monotherapies

Concurrent RB1 and TP53 Alterations Define a Subset of EGFR-Mutant Lung Cancers at risk for Histologic Transformation and Inferior Clinical Outcomes

Context Sensitive Modeling of Cancer Drug Sensitivity

Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis

Detection of minimal residual disease in B lymphoblastic leukemia using viSNE.

Dirichlet Process Mixture Model for Correcting Technical Variation in Single-Cell Gene Expression Data

Distinct Cellular Mechanisms Underlie Anti-CTLA-4 and Anti-PD-1 Checkpoint Blockade

Engineering γδT cells limits tonic signaling associated with chimeric antigen receptors

Environmental stresses disrupt telomere length homeostasis

Epigenetic plasticity cooperates with cell-cell interactions to direct pancreatic tumorigenesis

Epigenomic-Guided Mass Cytometry Profiling Reveals Disease-Specific Features of Exhausted CD8 T Cells

Frontiers in cancer immunotherapy-a symposium report

Fully defined human pluripotent stem cell-derived microglia and tri-culture system model C3 production in Alzheimer's disease

Functional Genomic Landscape of Human Breast Cancer Drivers, Vulnerabilities, and Resistance

Genotype-environment interactions reveal causal pathways that mediate genetic effects on phenotype

Harnessing gene expression to identify the genetic basis of drug resistance

High-resolution analysis of DNA regulatory elements by synthetic saturation mutagenesis

Highly multiplexed profiling of single-cell effector functions reveals deep functional heterogeneity in response to pathogenic ligands

Identifying regulatory mechanisms using individual variation reveals key role for chromatin modification

Immune profiling of human tumors identifies CD73 as a combinatorial target in glioblastoma

Inference of modules associated to eQTLs ⬇️

Innate Immune Landscape in Early Lung Adenocarcinoma by Paired Single-Cell Analyses.

Integration of genomic data enables selective discovery of breast cancer drivers.

Interferon α/β Enhances the Cytotoxic Response of MEK Inhibition in Melanoma

JISTIC: identification of significant targets in cancer.

L1CAM defines the regenerative origin of metastasis-initiating cells in colorectal cancer

Learning a prior on regulatory potential from eQTL data

Learning signaling network structures with sparsely distributed data

Lineage plasticity in cancer: a shared pathway of therapeutic resistance

MITI minimum information guidelines for highly multiplexed tissue images

Mapping differentiation under mixed culture conditions reveals a tunable continuum of T cell fates

Measuring Signaling and RNA-Seq in the Same Cell Links Gene Expression to Dynamic Patterns of NF-κB Activation.

Minreg: inferring an active regulator set.

Modularity and interactions in the genetics of gene expression

Modulatory profiling identifies mechanisms of small molecule-induced cell death.

NFkB disrupts tissue polarity in 3D by preventing integration of microenvironmental signals

Natural Genetic Variation Reveals Key Features of Epigenetic and Transcriptional Memory in Virus-Specific CD8 T Cells

Negative Co-stimulation Constrains T Cell Differentiation by Imposing Boundaries on Possible Cell States

Normalization of mass cytometry data with bead standards

Notch3 signaling promotes tumor cell adhesion and progression in a murine epithelial ovarian cancer model

PD-1 Blockade Expands Intratumoral Memory T Cells

Palladium-based mass tag cell barcoding with a doublet-filtering scheme and single-cell deconvolution algorithm

PhenoGraph and viSNE Facilitate the Identification of Abnormal T-Cell Populations in Routine Clinical Flow Cytometric Data

Principles and strategies for developing network models in cancer

Publisher Correction: Lineage plasticity in cancer: a shared pathway of therapeutic resistance

RHPN2 drives mesenchymal transformation in malignant glioma by triggering RhoA activation

Radiotherapy orchestrates natural killer cell dependent antitumor immune responses through CXCL8

Recovering Gene Interactions from Single-Cell Data Using Data Diffusion

Regenerative lineages and immune-mediated pruning in lung cancer metastasis

Regenerative potential of prostate luminal cells revealed by single-cell analysis

Scalable microfluidics for single-cell RNA printing and sequencing

Single-Cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment

Single-Cell Transcriptomics Reveals Early Emergence of Liver Parenchymal and Non-parenchymal Cell Lineages

Single-cell mass cytometry of TCR signaling: amplification of small initial differences results in low ERK activation in NOD mice

Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum

Single-cell trajectory detection uncovers progression and regulatory coordination in human B cell development

Systems biology. Conditional density-based analysis of T cell signaling in single-cell data

The Human Cell Atlas

The Human Cell Atlas

The Human Cell Atlas White Paper ⬇️

The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution

The emergent landscape of the mouse gut endoderm at single-cell resolution

The miR-424(322)/503 cluster orchestrates remodeling of the epithelium in the involuting mammary gland.

Toward understanding and exploiting tumor heterogeneity