Lista de obras -

A TLR2-Activating Fraction From Mycobacterium abscessus Rough Variant Demonstrates Vaccine and Diagnostic Potential

scientific article published on 27 August 2020

A quantitative proteomic approach using two-dimensional gel electrophoresis and isotope-coded affinity tag labeling for studying human 20S proteasome heterogeneity

artículo científico publicado en 2005

A screen for deubiquitinating enzymes involved in the G₂/M checkpoint identifies USP50 as a regulator of HSP90-dependent Wee1 stability.

artículo científico publicado en 2010

Affinity purification strategy to capture human endogenous proteasome complexes diversity and to identify proteasome-interacting proteins.

artículo científico publicado en 2009

Alloantibodies against MHC class I: a novel mechanism of neonatal pancytopenia linked to vaccination.

artículo científico publicado en 2011

Analysis of 5000 year-old human teeth using optimized large-scale and targeted proteomics approaches for detection of sex-specific peptides

scientific article published on 15 October 2019

Analysis of durum wheat proteome changes under marine and fungal biostimulant treatments using large-scale quantitative proteomics: A useful dataset of durum wheat proteins

scientific article published on 09 March 2019

Application of pulsed electric fields for the biocompatible extraction of proteins from the microalga Haematococcus pluvialis

scientific article published on 15 July 2020

Bacterial protein-O-mannosylating enzyme is crucial for virulence of Mycobacterium tuberculosis

artículo científico publicado en 2013

Benchmarking quantitative label-free LC-MS data processing workflows using a complex spiked proteomic standard dataset.

artículo científico publicado en 2015

Bisubstrate-Type Chemical Probes Identify GRP94 as a Potential Target of Cytosine-Containing Adenosine Analogs

scientific article published on 06 April 2020

Chronic ethanol feeding affects proteasome-interacting proteins

scientific journal article

Co-recruitment analysis of the CBL and CBLB signalosomes in primary T cells identifies CD5 as a key regulator of TCR-induced ubiquitylation

scientific journal article

Comparing 22 Popular Phosphoproteomics Pipelines for Peptide Identification and Site Localization

scientific article published on 04 February 2020

Comparison of human and non-human primate tooth proteomes as a basis for the study of ancient proteins

artículo científico publicado en 2020

Computational and Mass-Spectrometry-Based Workflow for the Discovery and Validation of Missing Human Proteins: Application to Chromosomes 2 and 14.

artículo científico

Control of RUNX-induced repression of Notch signaling by MLF and its partner DnaJ-1 during Drosophila hematopoiesis

artículo científico publicado en 2017

Deciphering preferential interactions within supramolecular protein complexes: the proteasome case

artículo científico publicado en 2015

Deciphering the ubiquitin proteome: Limits and advantages of high throughput global affinity purification-mass spectrometry approaches.

artículo científico

Deeper in the human cornea proteome using nanoLC–Orbitrap MS/MS: An improvement for future studies on cornea homeostasis and pathophysiology ⬇️

artículo científico publicado el 2 de octubre de 2011

Deimination of human filaggrin-2 promotes its proteolysis by calpain 1

scientific journal article

Determination of differentially regulated proteins upon proteasome inhibition in AML cell lines by the combination of large-scale and targeted quantitative proteomics.

artículo científico publicado en 2016

Eph-mediated tyrosine phosphorylation of citron kinase controls abscission

artículo científico publicado en 2016

Extensive analysis of the cytoplasmic proteome of human erythrocytes using the peptide ligand library technology and advanced mass spectrometry

artículo científico publicado en 2008

Final antigenic Melan-A peptides produced directly by the proteasomes are preferentially selected for presentation by HLA-A*0201 in melanoma cells

artículo científico publicado en 2004

First Structural Insights into -L-Arabinofuranosidases from the Two GH62 Glycoside Hydrolase Subfamilies

artículo científico publicado en 2014

Functional characterization of the Mycobacterium tuberculosis serine/threonine kinase PknJ

scientific journal article

GRK2 protein-mediated transphosphorylation contributes to loss of function of μ-opioid receptors induced by neuropeptide FF (NPFF2) receptors

artículo científico publicado en 2012

Identification and functional characterization of the phosphorylation sites of the neuropeptide FF2 receptor

artículo científico publicado en 2014

Identification of the hypoxia-inducible factor 2α nuclear interactome in melanoma cells reveals master proteins involved in melanoma development

artículo científico publicado en 2012

Improved sensitivity of biomolecular interaction analysis mass spectrometry for the identification of interacting molecules.

artículo científico publicado en 2003

In-depth exploration of cerebrospinal fluid by combining peptide ligand library treatment and label-free protein quantification

artículo científico publicado en 2010

Irgm2 and Gate-16 cooperatively dampen Gram-negative bacteria-induced caspase-11 response

scientific article published on 30 October 2020

Label-free quantification and shotgun analysis of complex proteomes by one-dimensional SDS-PAGE/NanoLC-MS: evaluation for the large scale analysis of inflammatory human endothelial cells

artículo científico publicado en 2012

Label-free quantitative urinary proteomics identifies the arginase pathway as a new player in congenital obstructive nephropathy

artículo científico publicado en 2014

Looking for Missing Proteins in the Proteome of Human Spermatozoa: An Update.

artículo científico

LymphoAtlas: a dynamic and integrated phosphoproteomic resource of TCR signaling in primary T cells reveals ITSN2 as a regulator of effector functions

artículo científico publicado en 2020

Mapping and structural dissection of human 20 S proteasome using proteomic approaches

artículo científico publicado en 2002

Mascot file parsing and quantification (MFPaQ), a new software to parse, validate, and quantify proteomics data generated by ICAT and SILAC mass spectrometric analyses: application to the proteomics study of membrane proteins from primary human [...]

artículo científico publicado en 2007

Mass Spectrometry-based Absolute Quantification of 20S Proteasome Status for Controlled Expansion of Human Adipose-derived Mesenchymal Stromal/Stem Cells

artículo científico publicado en 2019

Mechanistic insights into the impact of Cold Atmospheric Pressure Plasma on human epithelial cell lines

artículo científico publicado en 2017

Metabolome and proteome changes between biofilm and planktonic phenotypes of the marine bacterium Pseudoalteromonas lipolytica TC8.

artículo científico publicado en 2018

NanoLC-MS/MS analysis provides new insights into the phosphorylation pattern of Cdc25B in vivo: full overlap with sites of phosphorylation by Chk1 and Cdk1/cycB kinases in vitro.

artículo científico publicado en 2008

Opposing regulatory functions of the TIM3 (HAVCR2) signalosome in primary effector T cells as revealed by quantitative interactomics

artículo científico publicado en 2020

PKB/Akt phosphorylates the CDC25B phosphatase and regulates its intracellular localisation.

artículo científico publicado en 2003

Phosphoproteomic analysis of the mouse brain mu-opioid (MOP) receptor

artículo científico publicado en 2015

Phosphorylation of CDC25A on SER283 in late S/G2 by CDK/cyclin complexes accelerates mitotic entry.

artículo científico publicado en 2016

Potential Plasticity of the Mannoprotein Repertoire Associated to Mycobacterium tuberculosis Virulence Unveiled by Mass Spectrometry-Based Glycoproteomics

scientific article published on 18 May 2020

Proline: an efficient and user-friendly software suite for large-scale proteomics

artículo científico publicado en 2020

Promoter-Dependent Translation Controlled by p54nrb and hnRNPM during Myoblast Differentiation

artículo científico publicado en 2015

Proteo3Dnet: a web server for the integration of structural information with interactomics data

artículo científico publicado en 2021

Proteomic Analysis of Regulatory T Cells Reveals the Importance of Themis1 in the Control of Their Suppressive Function

artículo científico publicado en 2017

Proteomic analysis of anaplastic lymphoma cell lines: identification of potential tumour markers.

artículo científico publicado en 2006

Proteomics to study the diversity and dynamics of proteasome complexes: from fundamentals to the clinic.

artículo científico

Purification and proteomic analysis of 20S proteasomes from human cells.

artículo científico publicado en 2008

Quantitative interactomics in primary T cells unveils TCR signal diversification extent and dynamics

artículo científico publicado en 2019

Quantitative proteomic analysis to decipher the differential apoptotic response of bortezomib-treated APL cells before and after retinoic acid differentiation reveals involvement of protein toxicity mechanisms

artículo científico publicado en 2012

RIOK2 phosphorylation by RSK promotes synthesis of the human small ribosomal subunit

artículo científico publicado en 2021

Revisiting the Timing of Action of the PAG Adaptor Using Quantitative Proteomics Analysis of Primary T Cells

scientific journal article

SILAC-based proteomic profiling of the human MDA-MB-231 metastatic breast cancer cell line in response to the two antitumoral lactoferrin isoforms: the secreted lactoferrin and the intracellular delta-lactoferrin

artículo científico publicado en 2014

Scaled-down purification protocol to access proteomic analysis of 20S proteasome from human tissue samples: comparison of normal and tumor colorectal cells.

artículo científico publicado en 2008

Spiked proteomic standard dataset for testing label-free quantitative software and statistical methods.

artículo científico publicado en 2015

Study of the docking-dependent PLK1 phosphorylation of the CDC25B phosphatase.

artículo científico publicado en 2011

Subcellular distribution and dynamics of active proteasome complexes unraveled by a workflow combining in vivo complex cross-linking and quantitative proteomics.

artículo científico publicado en 2012

Substrates of the ASB2α E3 ubiquitin ligase in dendritic cells.

artículo científico publicado en 2015

The AF-1-deficient estrogen receptor ERα46 isoform is frequently expressed in human breast tumors

artículo científico publicado en 2016

The T cell CD6 receptor operates a multitask signalosome with opposite functions in T cell activation

artículo científico publicado en 2021

The costimulatory molecule CD226 signals through VAV1 to amplify TCR signals and promote IL-17 production by CD4+ T cells

artículo científico publicado en 2018

The ex planta signal activity of a Medicago ribosomal uL2 protein suggests a moonlighting role in controlling secondary rhizobial infection

artículo científico publicado en 2020

The exerkine apelin reverses age-associated sarcopenia

scientific article published on 30 July 2018

The final assembly of trehalose polyphleates takes place within the outer layer of the mycobacterial cell envelope

scientific article published on 17 June 2020

The nucleolar protein Nop19p interacts preferentially with Utp25p and Dhr2p and is essential for the production of the 40S ribosomal subunit in Saccharomyces cerevisiae.

artículo científico publicado en 2011

The production of a new MAGE-3 peptide presented to cytolytic T lymphocytes by HLA-B40 requires the immunoproteasome

artículo científico publicado en 2002

The two-step cleavage activity of PI-TfuI intein endonuclease demonstrated by matrix-assisted laser desorption ionization time-of-flight mass spectrometry

artículo científico publicado en 2002

The use of mass spectrometry to identify antigens from proteasome processing

artículo científico publicado en 2005

Tu1523: LYSOZYME FRACTION OF DONKEY MILK ALLEVIATES GUT HYPERPERMEABILITY AND VISCERAL HYPERSENSITIVITY IN A MOUSE MODEL OF CHRONIC STRESS: A BIFIDOGENIC MEDIATED EFFECT ASSOCIATED WITH A RESTORATION OF PANETH CELLS FUNCTIONNALITY

artículo científico publicado en 2022

VisioProt-MS: interactive 2D maps from intact protein mass spectrometry

artículo científico publicado en 2019

mzDB: a file format using multiple indexing strategies for the efficient analysis of large LC-MS/MS and SWATH-MS data sets

artículo científico publicado en 2014

Lista de obras de

A TLR2-Activating Fraction From Mycobacterium abscessus Rough Variant Demonstrates Vaccine and Diagnostic Potential

A quantitative proteomic approach using two-dimensional gel electrophoresis and isotope-coded affinity tag labeling for studying human 20S proteasome heterogeneity

A screen for deubiquitinating enzymes involved in the G₂/M checkpoint identifies USP50 as a regulator of HSP90-dependent Wee1 stability.

Affinity purification strategy to capture human endogenous proteasome complexes diversity and to identify proteasome-interacting proteins.

Alloantibodies against MHC class I: a novel mechanism of neonatal pancytopenia linked to vaccination.

Analysis of 5000 year-old human teeth using optimized large-scale and targeted proteomics approaches for detection of sex-specific peptides

Analysis of durum wheat proteome changes under marine and fungal biostimulant treatments using large-scale quantitative proteomics: A useful dataset of durum wheat proteins

Application of pulsed electric fields for the biocompatible extraction of proteins from the microalga Haematococcus pluvialis

Bacterial protein-O-mannosylating enzyme is crucial for virulence of Mycobacterium tuberculosis

Benchmarking quantitative label-free LC-MS data processing workflows using a complex spiked proteomic standard dataset.

Bisubstrate-Type Chemical Probes Identify GRP94 as a Potential Target of Cytosine-Containing Adenosine Analogs

Chronic ethanol feeding affects proteasome-interacting proteins

Co-recruitment analysis of the CBL and CBLB signalosomes in primary T cells identifies CD5 as a key regulator of TCR-induced ubiquitylation

Comparing 22 Popular Phosphoproteomics Pipelines for Peptide Identification and Site Localization

Comparison of human and non-human primate tooth proteomes as a basis for the study of ancient proteins

Computational and Mass-Spectrometry-Based Workflow for the Discovery and Validation of Missing Human Proteins: Application to Chromosomes 2 and 14.

Control of RUNX-induced repression of Notch signaling by MLF and its partner DnaJ-1 during Drosophila hematopoiesis

Deciphering preferential interactions within supramolecular protein complexes: the proteasome case

Deciphering the ubiquitin proteome: Limits and advantages of high throughput global affinity purification-mass spectrometry approaches.

Deeper in the human cornea proteome using nanoLC–Orbitrap MS/MS: An improvement for future studies on cornea homeostasis and pathophysiology ⬇️

Deimination of human filaggrin-2 promotes its proteolysis by calpain 1

Determination of differentially regulated proteins upon proteasome inhibition in AML cell lines by the combination of large-scale and targeted quantitative proteomics.

Eph-mediated tyrosine phosphorylation of citron kinase controls abscission

Extensive analysis of the cytoplasmic proteome of human erythrocytes using the peptide ligand library technology and advanced mass spectrometry

Final antigenic Melan-A peptides produced directly by the proteasomes are preferentially selected for presentation by HLA-A*0201 in melanoma cells

First Structural Insights into -L-Arabinofuranosidases from the Two GH62 Glycoside Hydrolase Subfamilies

Functional characterization of the Mycobacterium tuberculosis serine/threonine kinase PknJ

GRK2 protein-mediated transphosphorylation contributes to loss of function of μ-opioid receptors induced by neuropeptide FF (NPFF2) receptors

Identification and functional characterization of the phosphorylation sites of the neuropeptide FF2 receptor

Identification of the hypoxia-inducible factor 2α nuclear interactome in melanoma cells reveals master proteins involved in melanoma development

Improved sensitivity of biomolecular interaction analysis mass spectrometry for the identification of interacting molecules.

In-depth exploration of cerebrospinal fluid by combining peptide ligand library treatment and label-free protein quantification

Irgm2 and Gate-16 cooperatively dampen Gram-negative bacteria-induced caspase-11 response

Label-free quantification and shotgun analysis of complex proteomes by one-dimensional SDS-PAGE/NanoLC-MS: evaluation for the large scale analysis of inflammatory human endothelial cells

Label-free quantitative urinary proteomics identifies the arginase pathway as a new player in congenital obstructive nephropathy

Looking for Missing Proteins in the Proteome of Human Spermatozoa: An Update.

LymphoAtlas: a dynamic and integrated phosphoproteomic resource of TCR signaling in primary T cells reveals ITSN2 as a regulator of effector functions

Mapping and structural dissection of human 20 S proteasome using proteomic approaches

Mascot file parsing and quantification (MFPaQ), a new software to parse, validate, and quantify proteomics data generated by ICAT and SILAC mass spectrometric analyses: application to the proteomics study of membrane proteins from primary human [...]

Mass Spectrometry-based Absolute Quantification of 20S Proteasome Status for Controlled Expansion of Human Adipose-derived Mesenchymal Stromal/Stem Cells

Mechanistic insights into the impact of Cold Atmospheric Pressure Plasma on human epithelial cell lines

Metabolome and proteome changes between biofilm and planktonic phenotypes of the marine bacterium Pseudoalteromonas lipolytica TC8.

NanoLC-MS/MS analysis provides new insights into the phosphorylation pattern of Cdc25B in vivo: full overlap with sites of phosphorylation by Chk1 and Cdk1/cycB kinases in vitro.

Opposing regulatory functions of the TIM3 (HAVCR2) signalosome in primary effector T cells as revealed by quantitative interactomics

PKB/Akt phosphorylates the CDC25B phosphatase and regulates its intracellular localisation.

Phosphoproteomic analysis of the mouse brain mu-opioid (MOP) receptor

Phosphorylation of CDC25A on SER283 in late S/G2 by CDK/cyclin complexes accelerates mitotic entry.

Potential Plasticity of the Mannoprotein Repertoire Associated to Mycobacterium tuberculosis Virulence Unveiled by Mass Spectrometry-Based Glycoproteomics

Proline: an efficient and user-friendly software suite for large-scale proteomics

Promoter-Dependent Translation Controlled by p54nrb and hnRNPM during Myoblast Differentiation

Proteo3Dnet: a web server for the integration of structural information with interactomics data

Proteomic Analysis of Regulatory T Cells Reveals the Importance of Themis1 in the Control of Their Suppressive Function

Proteomic analysis of anaplastic lymphoma cell lines: identification of potential tumour markers.

Proteomics to study the diversity and dynamics of proteasome complexes: from fundamentals to the clinic.

Purification and proteomic analysis of 20S proteasomes from human cells.

Quantitative interactomics in primary T cells unveils TCR signal diversification extent and dynamics

Quantitative proteomic analysis to decipher the differential apoptotic response of bortezomib-treated APL cells before and after retinoic acid differentiation reveals involvement of protein toxicity mechanisms

RIOK2 phosphorylation by RSK promotes synthesis of the human small ribosomal subunit

Revisiting the Timing of Action of the PAG Adaptor Using Quantitative Proteomics Analysis of Primary T Cells

SILAC-based proteomic profiling of the human MDA-MB-231 metastatic breast cancer cell line in response to the two antitumoral lactoferrin isoforms: the secreted lactoferrin and the intracellular delta-lactoferrin

Scaled-down purification protocol to access proteomic analysis of 20S proteasome from human tissue samples: comparison of normal and tumor colorectal cells.

Spiked proteomic standard dataset for testing label-free quantitative software and statistical methods.

Study of the docking-dependent PLK1 phosphorylation of the CDC25B phosphatase.

Subcellular distribution and dynamics of active proteasome complexes unraveled by a workflow combining in vivo complex cross-linking and quantitative proteomics.

Substrates of the ASB2α E3 ubiquitin ligase in dendritic cells.

The AF-1-deficient estrogen receptor ERα46 isoform is frequently expressed in human breast tumors

The T cell CD6 receptor operates a multitask signalosome with opposite functions in T cell activation

The costimulatory molecule CD226 signals through VAV1 to amplify TCR signals and promote IL-17 production by CD4+ T cells

The ex planta signal activity of a Medicago ribosomal uL2 protein suggests a moonlighting role in controlling secondary rhizobial infection

The exerkine apelin reverses age-associated sarcopenia

The final assembly of trehalose polyphleates takes place within the outer layer of the mycobacterial cell envelope

The nucleolar protein Nop19p interacts preferentially with Utp25p and Dhr2p and is essential for the production of the 40S ribosomal subunit in Saccharomyces cerevisiae.

The production of a new MAGE-3 peptide presented to cytolytic T lymphocytes by HLA-B40 requires the immunoproteasome

The two-step cleavage activity of PI-TfuI intein endonuclease demonstrated by matrix-assisted laser desorption ionization time-of-flight mass spectrometry

The use of mass spectrometry to identify antigens from proteasome processing

Tu1523: LYSOZYME FRACTION OF DONKEY MILK ALLEVIATES GUT HYPERPERMEABILITY AND VISCERAL HYPERSENSITIVITY IN A MOUSE MODEL OF CHRONIC STRESS: A BIFIDOGENIC MEDIATED EFFECT ASSOCIATED WITH A RESTORATION OF PANETH CELLS FUNCTIONNALITY

VisioProt-MS: interactive 2D maps from intact protein mass spectrometry

mzDB: a file format using multiple indexing strategies for the efficient analysis of large LC-MS/MS and SWATH-MS data sets

Analysis of 5000 year-old human teeth using optimized large-scale and targeted proteomics approaches for detection of sex-specific peptides