Lista de obras -

A Consensus Genetic Map for Pinus taeda and Pinus elliottii and Extent of Linkage Disequilibrium in Two Genotype-Phenotype Discovery Populations of Pinus taeda.

artículo científico publicado en 2015

A Reference Genome Sequence for Giant Sequoia

scientific article published on 18 September 2020

A Reference Genome Sequence for the European Silver Fir (Abies alba Mill.): A Community-Generated Genomic Resource

artículo científico publicado en 2019

A sequence mutation in the cinnamyl alcohol dehydrogenase gene associated with altered lignification in loblolly pine

artículo científico publicado en 2003

Adaptive evolution of Mediterranean pines

artículo científico publicado en 2013

Adaptive variation in natural Alpine populations of Norway spruce ( Picea abies [L.] Karst) at regional scale: Landscape features and altitudinal gradient effects

scientific article published in 2017

Alpine forest genomics network (AForGeN): a report of the first annual meeting

An arabinogalactan protein associated with secondary cell wall formation in differentiating xylem of loblolly pine

artículo científico publicado en 2003

An empirical evaluation of two-stage species tree inference strategies using a multilocus dataset from North American pines

artículo científico publicado en 2014

An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing

artículo científico publicado en 2017

Assessing the Gene Content of the Megagenome: Sugar Pine (Pinus lambertiana).

artículo científico publicado en 2016

Association and linkage mapping to unravel genetic architecture of phenological traits and lateral bearing in Persian walnut (Juglans regia L.).

artículo científico publicado en 2020

Association genetics in Pinus taeda L. I. Wood property traits.

artículo científico publicado en 2006

Association genetics of chemical wood properties in black poplar (Populus nigra).

artículo científico publicado en 2012

Association genetics of coastal Douglas fir (Pseudotsuga menziesii var. menziesii, Pinaceae). I. Cold-hardiness related traits

artículo científico publicado en 2009

Association genetics of complex traits in conifers

artículo científico publicado en 2004

Association genetics of oleoresin flow in loblolly pine: discovering genes and predicting phenotype for improved resistance to bark beetles and bioenergy potential

artículo científico publicado en 2013

Association genetics of the loblolly pine (Pinus taeda, Pinaceae) metabolome

artículo científico publicado en 2011

Association genetics of traits controlling lignin and cellulose biosynthesis in black cottonwood (Populus trichocarpa, Salicaceae) secondary xylem

artículo científico publicado en 2010

Association mapping of quantitative disease resistance in a natural population of loblolly pine (Pinus taeda L.).

artículo científico publicado en 2010

Association of loblolly pine xylem development gene expression with single-nucleotide polymorphisms.

artículo científico publicado en 2013

Back to nature: ecological genomics of loblolly pine (Pinus taeda, Pinaceae).

artículo científico publicado en 2010

CartograTree: connecting tree genomes, phenotypes and environment

artículo científico

Climate-related adaptive genetic variation and population structure in natural stands of Norway spruce in the South-Eastern Alps

Combining phenotype, genotype, and environment to uncover genetic components underlying water use efficiency in Persian walnut

artículo científico publicado en 2020

Comparative Transcriptomics Among Four White Pine Species

artículo científico publicado en 2018

Comparative analysis of differential gene expression indicates divergence in ontogenetic strategies of leaves in two conifer genera

artículo científico publicado en 2022

Comparative genomics of six Juglans species reveals disease-associated gene family contractions

artículo científico publicado en 2019

Comparative mapping in Pinus: sugar pine (Pinus lambertiana Dougl.) and loblolly pine (Pinus taeda L.)

article by Kathleen D. Jermstad et al published 23 October 2010 in Tree Genetics and Genomes

Comparative mapping in the Pinaceae

artículo científico publicado en 2004

Conifer DBMagic: a database housing multiple de novo transcriptome assemblies for 12 diverse conifer species

artículo científico publicado en 2012

Conserved ortholog sets in forest trees

Contrasting patterns of nucleotide diversity for four conifers of Alpine European forests

artículo científico publicado en 2012

DNA sequence variation and selection of tag single-nucleotide polymorphisms at candidate genes for drought-stress response in Pinus taeda L.

artículo científico publicado en 2005

Deciphering of the Genetic Control of Phenology, Yield, and Pellicle Color in Persian Walnut (Juglans regia L.).

artículo científico publicado en 2019

Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies

artículo científico publicado en 2014

Development and implementation of a highly-multiplexed SNP array for genetic mapping in maritime pine and comparative mapping with loblolly pine

artículo científico publicado en 2011

Discovering candidate genes that regulate resin canal number in Pinus taeda stems by integrating genetic analysis across environments, ages, and populations

artículo científico publicado en 2014

Disentangling the roles of history and local selection in shaping clinal variation of allele frequencies and gene expression in Norway spruce (Picea abies)

artículo científico publicado en 2012

Dissecting the Polygenic Basis of Cold Adaptation Using Genome-Wide Association of Traits and Environmental Data in Douglas-fir

scientific article published in 2021

DnaSAM: Software to perform neutrality testing for large datasets with complex null models ⬇️

artículo científico publicado el 5 de octubre de 2009

Environmental Genome-Wide Association Reveals Climate Adaptation Is Shaped by Subtle to Moderate Allele Frequency Shifts in Loblolly Pine

scientific article published on 01 October 2019

Environmental effects on fine-scale spatial genetic structure in four Alpine keystone forest tree species

artículo científico publicado en 2017

Environmental versus geographical determinants of genetic structure in two subalpine conifers.

artículo científico publicado en 2013

Erratum to: An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing

artículo científico publicado en 2017

Evolution of disease response genes in loblolly pine: insights from candidate genes

artículo científico publicado en 2010

Exome resequencing and GWAS for growth, ecophysiology, and chemical and metabolomic composition of wood of Populus trichocarpa

artículo científico publicado en 2019

Finding loci associated to partial resistance to white pine blister rust in sugar pine (Pinus lambertiana Dougl.).

artículo científico publicado en 2017

Forest tree genomics: growing resources and applications

artículo científico publicado en 2011

Forest-tree population genomics and adaptive evolution.

artículo científico publicado en 2006

From genotype to phenotype: unraveling the complexities of cold adaptation in forest trees

artículo científico publicado en 2004

Genetic Analysis of Walnut (Juglans regia L.) Pellicle Pigment Variation Through a Novel, High-Throughput Phenotyping Platform

artículo científico publicado en 2020

Genetic structure and association mapping of adaptive and selective traits in the east Texas loblolly pine (Pinus taeda L.) breeding populations

Genome-wide association study identifies a major gene for beech bark disease resistance in American beech (Fagus grandifolia Ehrh.).

artículo científico publicado en 2017

Genome‐wide association identifies candidate genes for drought tolerance in coast redwood and giant sequoia

artículo científico publicado en 2021

Genomic Variation Among and Within Six Juglans Species.

artículo científico publicado en 2018

Genomic architecture of complex traits in loblolly pine

article

Genomic architecture of complex traits in loblolly pine

artículo científico publicado en 2018

Genomic basis of white pine blister rust quantitative disease resistance and its relationship with qualitative resistance

scientific article published on 11 July 2020

Genomic estimated breeding values using genomic relationship matrices in a cloned population of loblolly pine.

artículo científico publicado en 2013

Genomic selection using a realized genomic relationship matrix in a Pinus taeda L. cloned population

artículo científico publicado en 2011

High rate of adaptive evolution in two widespread European pines.

artículo científico publicado en 2017

High-quality chromosome-scale assembly of the walnut (Juglans regia L.) reference genome

artículo científico publicado en 2020

Identification of quantitative trait loci influencing wood property traits in loblolly pine (Pinus taeda L.). III. QTL Verification and candidate gene mapping

artículo científico publicado en 2003

Insights into the loblolly pine genome: characterization of BAC and fosmid sequences

artículo científico publicado en 2013

Local adaptation at fine spatial scales: an example from sugar pine (Pinus lambertiana, Pinaceae)

artículo científico publicado en 2015

Mapping Fusiform Rust Resistance Genes within a Complex Mating Design of Loblolly Pine

artículo científico publicado en 2014

Mapping of quantitative trait loci controlling adaptive traits in coastal Douglas fir. III. Quantitative trait loci-by-environment interactions.

artículo científico publicado en 2003

Micro- and macro-geographic scale effect on the molecular imprint of selection and adaptation in Norway spruce

artículo científico publicado en 2014

Multilocus analyses reveal little evidence for lineage-wide adaptive evolution within major clades of soft pines (Pinus subgenus Strobus).

artículo científico publicado en 2013

Multilocus patterns of nucleotide diversity and divergence reveal positive selection at candidate genes related to cold hardiness in coastal Douglas Fir (Pseudotsuga menziesii var. menziesii).

artículo científico publicado en 2009

Nucleotide diversity and linkage disequilibrium in cold-hardiness- and wood quality-related candidate genes in Douglas fir.

artículo científico publicado en 2005

Nucleotide diversity and linkage disequilibrium in loblolly pine

scholarly article

Open access to tree genomes: the path to a better forest

artículo científico publicado en 2013

Patterns of population structure and environmental associations to aridity across the range of loblolly pine (Pinus taeda L., Pinaceae).

artículo científico publicado en 2010

PineSAP--sequence alignment and SNP identification pipeline

artículo científico publicado en 2009

Population biology of sugar pine (Pinus lambertiana Dougl.) with reference to historical disturbances in the Lake Tahoe Basin: Implications for restoration

artículo científico publicado en 2011

Pseudo-chromosome-length genome assembly of a double haploid "Bartlett" pear (Pyrus communis L.).

artículo científico publicado en 2019

Quantitative trait loci influencing forking defects in an outbred pedigree of loblolly pine

artículo científico publicado en 2016

Reconstruction of the Largest Pedigree Network for Pear Cultivars and Evaluation of the Genetic Diversity of the USDA-ARS National Pyrus Collection

artículo científico publicado en 2020

SNP markers trace familial linkages in a cloned population of Pinus taeda—prospects for genomic selection

article published in 2012

Selective Sweeps and Polygenic Adaptation Drive Local Adaptation along Moisture and Temperature Gradients in Natural Populations of Coast Redwood and Giant Sequoia

artículo científico publicado en 2021

Sequence of the Sugar Pine Megagenome

artículo científico publicado en 2016

Sequencing and assembly of the 22-gb loblolly pine genome

artículo científico publicado en 2014

Spatial Algorithms Applied to Landscape Diversity Estimate from Remote Sensing Data

article

Spatially variable natural selection and the divergence between parapatric subspecies of lodgepole pine (Pinus contorta, Pinaceae).

artículo científico publicado en 2012

The Douglas-Fir Genome Sequence Reveals Specialization of the Photosynthetic Apparatus in Pinaceae

artículo científico publicado en 2017

The Pinus taeda genome is characterized by diverse and highly diverged repetitive sequences

artículo científico publicado en 2010

The evolutionary genetics of the genes underlying phenotypic associations for loblolly pine (Pinus taeda, Pinaceae)

artículo científico publicado en 2013

The walnut (Juglans regia) genome sequence reveals diversity in genes coding for the biosynthesis of non-structural polyphenols

artículo científico publicado en 2016

Transcription Through The Eye Of A Needle: Daily And Annual Cycles Of Gene Expression Variation In Douglas-Fir Needles

article

Transcription through the eye of a needle: daily and annual cyclic gene expression variation in Douglas-fir needles.

artículo científico publicado en 2017

TreeGenes: A forest tree genome database

artículo científico publicado en 2008

Unique features of the loblolly pine (Pinus taeda L.) megagenome revealed through sequence annotation

artículo científico publicado en 2014

Water availability drives signatures of local adaptation in whitebark pine (Pinus albicaulis Engelm.) across fine spatial scales of the Lake Tahoe Basin, USA.

artículo científico publicado en 2017

YeATS - a tool suite for analyzing RNA-seq derived transcriptome identifies a highly transcribed putative extensin in heartwood/sapwood transition zone in black walnut

artículo científico publicado en 2015

Lista de obras de

A Consensus Genetic Map for Pinus taeda and Pinus elliottii and Extent of Linkage Disequilibrium in Two Genotype-Phenotype Discovery Populations of Pinus taeda.

A Reference Genome Sequence for Giant Sequoia

A Reference Genome Sequence for the European Silver Fir (Abies alba Mill.): A Community-Generated Genomic Resource

A sequence mutation in the cinnamyl alcohol dehydrogenase gene associated with altered lignification in loblolly pine

Adaptive evolution of Mediterranean pines

Adaptive variation in natural Alpine populations of Norway spruce ( Picea abies [L.] Karst) at regional scale: Landscape features and altitudinal gradient effects

Alpine forest genomics network (AForGeN): a report of the first annual meeting

An arabinogalactan protein associated with secondary cell wall formation in differentiating xylem of loblolly pine

An empirical evaluation of two-stage species tree inference strategies using a multilocus dataset from North American pines

An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing

Assessing the Gene Content of the Megagenome: Sugar Pine (Pinus lambertiana).

Association and linkage mapping to unravel genetic architecture of phenological traits and lateral bearing in Persian walnut (Juglans regia L.).

Association genetics in Pinus taeda L. I. Wood property traits.

Association genetics of chemical wood properties in black poplar (Populus nigra).

Association genetics of coastal Douglas fir (Pseudotsuga menziesii var. menziesii, Pinaceae). I. Cold-hardiness related traits

Association genetics of complex traits in conifers

Association genetics of oleoresin flow in loblolly pine: discovering genes and predicting phenotype for improved resistance to bark beetles and bioenergy potential

Association genetics of the loblolly pine (Pinus taeda, Pinaceae) metabolome

Association genetics of traits controlling lignin and cellulose biosynthesis in black cottonwood (Populus trichocarpa, Salicaceae) secondary xylem

Association mapping of quantitative disease resistance in a natural population of loblolly pine (Pinus taeda L.).

Association of loblolly pine xylem development gene expression with single-nucleotide polymorphisms.

Back to nature: ecological genomics of loblolly pine (Pinus taeda, Pinaceae).

CartograTree: connecting tree genomes, phenotypes and environment

Climate-related adaptive genetic variation and population structure in natural stands of Norway spruce in the South-Eastern Alps

Combining phenotype, genotype, and environment to uncover genetic components underlying water use efficiency in Persian walnut

Comparative Transcriptomics Among Four White Pine Species

Comparative analysis of differential gene expression indicates divergence in ontogenetic strategies of leaves in two conifer genera

Comparative genomics of six Juglans species reveals disease-associated gene family contractions

Comparative mapping in Pinus: sugar pine (Pinus lambertiana Dougl.) and loblolly pine (Pinus taeda L.)

Comparative mapping in the Pinaceae

Conifer DBMagic: a database housing multiple de novo transcriptome assemblies for 12 diverse conifer species

Conserved ortholog sets in forest trees

Contrasting patterns of nucleotide diversity for four conifers of Alpine European forests

DNA sequence variation and selection of tag single-nucleotide polymorphisms at candidate genes for drought-stress response in Pinus taeda L.

Deciphering of the Genetic Control of Phenology, Yield, and Pellicle Color in Persian Walnut (Juglans regia L.).

Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies

Development and implementation of a highly-multiplexed SNP array for genetic mapping in maritime pine and comparative mapping with loblolly pine

Discovering candidate genes that regulate resin canal number in Pinus taeda stems by integrating genetic analysis across environments, ages, and populations

Disentangling the roles of history and local selection in shaping clinal variation of allele frequencies and gene expression in Norway spruce (Picea abies)

Dissecting the Polygenic Basis of Cold Adaptation Using Genome-Wide Association of Traits and Environmental Data in Douglas-fir

DnaSAM: Software to perform neutrality testing for large datasets with complex null models ⬇️

Environmental Genome-Wide Association Reveals Climate Adaptation Is Shaped by Subtle to Moderate Allele Frequency Shifts in Loblolly Pine

Environmental effects on fine-scale spatial genetic structure in four Alpine keystone forest tree species

Environmental versus geographical determinants of genetic structure in two subalpine conifers.

Erratum to: An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing

Evolution of disease response genes in loblolly pine: insights from candidate genes

Exome resequencing and GWAS for growth, ecophysiology, and chemical and metabolomic composition of wood of Populus trichocarpa

Finding loci associated to partial resistance to white pine blister rust in sugar pine (Pinus lambertiana Dougl.).

Forest tree genomics: growing resources and applications

Forest-tree population genomics and adaptive evolution.

From genotype to phenotype: unraveling the complexities of cold adaptation in forest trees

Genetic Analysis of Walnut (Juglans regia L.) Pellicle Pigment Variation Through a Novel, High-Throughput Phenotyping Platform

Genetic structure and association mapping of adaptive and selective traits in the east Texas loblolly pine (Pinus taeda L.) breeding populations

Genome-wide association study identifies a major gene for beech bark disease resistance in American beech (Fagus grandifolia Ehrh.).

Genome‐wide association identifies candidate genes for drought tolerance in coast redwood and giant sequoia

Genomic Variation Among and Within Six Juglans Species.

Genomic architecture of complex traits in loblolly pine

Genomic architecture of complex traits in loblolly pine

Genomic basis of white pine blister rust quantitative disease resistance and its relationship with qualitative resistance

Genomic estimated breeding values using genomic relationship matrices in a cloned population of loblolly pine.

Genomic selection using a realized genomic relationship matrix in a Pinus taeda L. cloned population

High rate of adaptive evolution in two widespread European pines.

High-quality chromosome-scale assembly of the walnut (Juglans regia L.) reference genome

Identification of quantitative trait loci influencing wood property traits in loblolly pine (Pinus taeda L.). III. QTL Verification and candidate gene mapping

Insights into the loblolly pine genome: characterization of BAC and fosmid sequences

Local adaptation at fine spatial scales: an example from sugar pine (Pinus lambertiana, Pinaceae)

Mapping Fusiform Rust Resistance Genes within a Complex Mating Design of Loblolly Pine

Mapping of quantitative trait loci controlling adaptive traits in coastal Douglas fir. III. Quantitative trait loci-by-environment interactions.

Micro- and macro-geographic scale effect on the molecular imprint of selection and adaptation in Norway spruce

Multilocus analyses reveal little evidence for lineage-wide adaptive evolution within major clades of soft pines (Pinus subgenus Strobus).

Multilocus patterns of nucleotide diversity and divergence reveal positive selection at candidate genes related to cold hardiness in coastal Douglas Fir (Pseudotsuga menziesii var. menziesii).

Nucleotide diversity and linkage disequilibrium in cold-hardiness- and wood quality-related candidate genes in Douglas fir.

Nucleotide diversity and linkage disequilibrium in loblolly pine

Open access to tree genomes: the path to a better forest

Patterns of population structure and environmental associations to aridity across the range of loblolly pine (Pinus taeda L., Pinaceae).

PineSAP--sequence alignment and SNP identification pipeline

Population biology of sugar pine (Pinus lambertiana Dougl.) with reference to historical disturbances in the Lake Tahoe Basin: Implications for restoration

Pseudo-chromosome-length genome assembly of a double haploid "Bartlett" pear (Pyrus communis L.).

Quantitative trait loci influencing forking defects in an outbred pedigree of loblolly pine