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A Single-Cell Transcriptome Atlas of the Aging Drosophila Brain

article by Kristofer Davie et al published 9 August 2018 in Cell

Comparative motif discovery combined with comparative transcriptomics yields accurate targetome and enhancer predictions

artículo científico publicado en 2012

Decoding the regulatory landscape of melanoma reveals TEADS as regulators of the invasive cell state

artículo científico publicado en 2015

Discovery of transcription factors and regulatory regions driving in vivo tumor development by ATAC-seq and FAIRE-seq open chromatin profiling

artículo científico publicado en 2015

Identification of Lineage-Specific Cis-Regulatory Modules Associated with Variation in Transcription Factor Binding and Chromatin Activity Using Ornstein-Uhlenbeck Models

artículo científico publicado en 2015

Identification of cis-regulatory mutations generating de novo edges in personalized cancer gene regulatory networks

artículo científico

Identification of genomic enhancers through spatial integration of single-cell transcriptomics and epigenomics

scientific article published on 01 May 2020

Mapping gene regulatory networks in Drosophila eye development by large-scale transcriptome perturbations and motif inference.

artículo científico publicado en 2014

Multiplex enhancer-reporter assays uncover unsophisticated TP53 enhancer logic

artículo científico publicado en 2016

Robust gene expression programs underlie recurrent cell states and phenotype switching in melanoma

scientific article published on 03 August 2020

The transcription factor Grainy head primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes

cisTopic: cis-regulatory topic modeling on single-cell ATAC-seq data

artículo científico publicado en 2019

iRegulon: from a gene list to a gene regulatory network using large motif and track collections

artículo científico publicado en 2014

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