Lista de obras -

A Targeted Mass Spectrometric Assay for Reliable Sensitive Hepcidin Quantification

artículo científico publicado en 2019

A comparative analysis of computational approaches to relative protein quantification using peptide peak intensities in label-free LC-MS proteomics experiments.

artículo científico publicado en 2012

A comprehensive collection of systems biology data characterizing the host response to viral infection.

artículo científico publicado en 2014

A proteomic view ofDesulfovibrio vulgaris metabolism as determined by liquid chromatography coupled with tandem mass spectrometry

scholarly article by Weiwen Zhang published in August 2006

Advancing the high throughput identification of liver fibrosis protein signatures using multiplexed ion mobility spectrometry

artículo científico publicado en 2014

Antibody-independent targeted quantification of TMPRSS2-ERG fusion protein products in prostate cancer.

artículo científico publicado en 2014

Application of multiplexed ion mobility spectrometry towards the identification of host protein signatures of treatment effect in pulmonary tuberculosis

artículo científico publicado en 2018

Application of proteomics in the discovery of candidate protein biomarkers in a diabetes autoantibody standardization program sample subset.

artículo científico publicado en 2007

Applying a targeted label-free approach using LC-MS AMT tags to evaluate changes in protein phosphorylation following phosphatase inhibition

artículo científico publicado en 2007

Blood peptidome-degradome profile of breast cancer

artículo científico publicado en 2010

Boosting to Amplify Signal with Isobaric Labeling (BASIL) Strategy for Comprehensive Quantitative Phosphoproteomic Characterization of Small Populations of Cells.

artículo científico publicado en 2019

Broad Substrate-Specific Phosphorylation Events Are Associated With the Initial Stage of Plant Cell Wall Recognition in Neurospora crassa

artículo científico publicado en 2019

Cerebrospinal fluid proteome of patients with acute Lyme disease

artículo científico publicado en 2012

Characterization of Purifiedc-Type Heme-Containing Peptides and Identification ofc-Type Heme-Attachment Sites inShewanellaoneidenisCytochromes Using Mass Spectrometry

scientific article published on 01 May 2005

Characterization of the human pancreatic islet proteome by two-dimensional LC/MS/MS

artículo científico publicado en 2006

Characterization of the mouse brain proteome using global proteomic analysis complemented with cysteinyl-peptide enrichment

artículo científico publicado en 2006

Characterization of the mouse pancreatic islet proteome and comparative analysis with other mouse tissues

artículo científico publicado en 2008

Combined pulsed-Q dissociation and electron transfer dissociation for identification and quantification of iTRAQ-labeled phosphopeptides

scientific article published on May 2009

Comparative phosphoproteomics reveals components of host cell invasion and post-transcriptional regulation during Francisella infection

artículo científico publicado en 2013

Comparative proteome analyses of human plasma following in vivo lipopolysaccharide administration using multidimensional separations coupled with tandem mass spectrometry.

artículo científico publicado en 2005

Comprehensive Proteomics Analysis of Stressed Human Islets Identifies GDF15 as a Target for Type 1 Diabetes Intervention

scientific article published on 09 January 2020

Comprehensive identification of glycated peptides and their glycation motifs in plasma and erythrocytes of control and diabetic subjects

artículo científico publicado en 2011

Correction: Proteogenomic Characterization of Ovarian HGSC Implicates Mitotic Kinases, Replication Stress in Observed Chromosomal Instability

scientific article published on 01 August 2020

Coupled transcriptome and proteome analysis of human lymphotropic tumor viruses: insights on the detection and discovery of viral genes

artículo científico publicado en 2011

Defective insulin receptor signaling in hPSCs skews pluripotency and negatively perturbs neural differentiation

Determination of burn patient outcome by large-scale quantitative discovery proteomics

artículo científico publicado en 2013

Discovery of novel glucose-regulated proteins in isolated human pancreatic islets using LC-MS/MS-based proteomics

artículo científico publicado en 2012

Diurnal rhythms result in significant changes in the cellular protein complement in the cyanobacterium Cyanothece 51142.

artículo científico publicado en 2011

Dynamic Proteome Analysis of Cyanothece sp. ATCC 51142 under Constant Light

article

Dynamic proteomic profiling of a unicellular cyanobacterium Cyanothece ATCC51142 across light-dark diurnal cycles

artículo científico publicado en 2011

Elucidating regulatory processes of intense physical activity by multi-omics analysis

artículo científico publicado en 2023

Evaluation of multiprotein immunoaffinity subtraction for plasma proteomics and candidate biomarker discovery using mass spectrometry.

artículo científico publicado en 2006

Global Proteomic Analysis Reveals an Exclusive Role of Thylakoid Membranes in Bioenergetics of a Model Cyanobacterium

artículo científico publicado en 2016

Global proteomics reveal an atypical strategy for carbon/nitrogen assimilation by a cyanobacterium under diverse environmental perturbations

artículo científico publicado en 2010

High dynamic range characterization of the trauma patient plasma proteome

artículo científico publicado en 2006

Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry

artículo científico publicado en 2005

Identification of a novel mitotic phosphorylation motif associated with protein localization to the mitotic apparatus

artículo científico publicado en 2007

IgY14 and SuperMix immunoaffinity separations coupled with liquid chromatography-mass spectrometry for human plasma proteomics biomarker discovery.

artículo científico publicado en 2011

Improved proteome coverage by using high efficiency cysteinyl peptide enrichment: the human mammary epithelial cell proteome

artículo científico publicado en 2005

Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer.

artículo científico publicado en 2016

Integrated molecular signature of disease: analysis of influenza virus-infected macaques through functional genomics and proteomics

artículo científico publicado en 2006

Integrative analysis of the mitochondrial proteome in yeast

artículo científico publicado en 2004

Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels

artículo científico publicado en 2014

LC-MS/MS based proteomic analysis and functional inference of hypothetical proteins in Desulfovibrio vulgaris

artículo científico publicado en 2006

Large-Scale and Deep Quantitative Proteome Profiling Using Isobaric Labeling Coupled with Two-Dimensional LC-MS/MS.

artículo científico publicado en 2016

Large-scale multiplexed quantitative discovery proteomics enabled by the use of an (18)O-labeled "universal" reference sample

artículo científico publicado en 2009

Longitudinal analysis of host protein serum signatures of treatment and recovery in pulmonary tuberculosis

artículo científico publicado en 2024

Macaque proteome response to highly pathogenic avian influenza and 1918 reassortant influenza virus infections

artículo científico publicado en 2010

Mitotic protein kinase CDK1 phosphorylation of mRNA translation regulator 4E-BP1 Ser83 may contribute to cell transformation

artículo científico publicado en 2016

Morphine produces immunosuppressive effects in nonhuman primates at the proteomic and cellular levels

artículo científico publicado en 2012

Multi-platform 'Omics Analysis of Human Ebola Virus Disease Pathogenesis

artículo científico publicado en 2017

Phosphoproteome Analysis Reveals Estrogen-ER Pathway as a Modulator of mTOR Activity Via DEPTOR

scientific article published on 12 June 2019

Phosphoproteomics profiling of human skin fibroblast cells reveals pathways and proteins affected by low doses of ionizing radiation

artículo científico publicado en 2010

Preconditioning in the Rhesus Macaque Induces a Proteomic Signature Following Cerebral Ischemia that Is Associated with Neuroprotection

artículo científico publicado en 2018

Preserved DNA Damage Checkpoint Pathway Protects against Complications in Long-Standing Type 1 Diabetes

artículo científico publicado en 2015

Proteogenomic Analysis of Human Colon Cancer Reveals New Therapeutic Opportunities

scientific article published on 25 April 2019

Proteogenomic Characterization of Endometrial Carcinoma

scientific article published on 13 February 2020

Proteogenomic Characterization of Ovarian HGSC Implicates Mitotic Kinases, Replication Stress in Observed Chromosomal Instability

artículo científico publicado en 2020

Proteome analysis of liver cells expressing a full-length hepatitis C virus (HCV) replicon and biopsy specimens of posttransplantation liver from HCV-infected patients

artículo científico publicado en 2005

Proteome and computational analyses reveal new insights into the mechanisms of hepatitis C virus-mediated liver disease posttransplantation

artículo científico publicado en 2012

Proteomic analysis of saliva in HIV-positive heroin addicts reveals proteins correlated with cognition

artículo científico publicado en 2014

Proteomic analysis reveals down-regulation of surfactant protein B in murine type II pneumocytes infected with influenza A virus.

artículo científico publicado en 2015

Proteomic profiling of exosomes leads to the identification of novel biomarkers for prostate cancer

artículo científico publicado en 2013

Proteomic profiling of human liver biopsies: hepatitis C virus-induced fibrosis and mitochondrial dysfunction

artículo científico publicado en 2007

QC-ART: A tool for real-time quality control assessment of mass spectrometry-based proteomics data.

artículo científico publicado en 2018

Quantitative analysis of cell surface membrane proteins using membrane-impermeable chemical probe coupled with 18O labeling.

artículo científico publicado en 2010

Quantitative analysis of human immunodeficiency virus type 1-infected CD4+ cell proteome: dysregulated cell cycle progression and nuclear transport coincide with robust virus production

artículo científico publicado en 2007

Quantitative phosphoproteomic analysis of soybean root hairs inoculated with Bradyrhizobium japonicum

artículo científico publicado en 2012

Quantitative phosphoproteomics identifies filaggrin and other targets of ionizing radiation in a human skin model.

artículo científico publicado en 2012

Quantitative proteomics identifies altered O-GlcNAcylation of structural, synaptic and memory-associated proteins in Alzheimer's disease

artículo científico publicado en 2017

Regulation of gene expression and subcellular protein distribution in MLO-Y4 osteocytic cells by lysophosphatidic acid: Relevance to dendrite outgrowth

artículo científico publicado en 2011

Reproducible workflow for multiplexed deep-scale proteome and phosphoproteome analysis of tumor tissues by liquid chromatography-mass spectrometry

scientific article published on 01 July 2018

Residual tissue repositories as a resource for population-based cancer proteomic studies

artículo científico publicado en 2018

Reversed-phase chromatography with multiple fraction concatenation strategy for proteome profiling of human MCF10A cells

artículo científico publicado en 2011

Selective Enrichment Coupled with Proteomics to Identify S-Acylated Plasma Membrane Proteins in Arabidopsis

scientific article published on 01 December 2020

Sensitive targeted quantification of ERK phosphorylation dynamics and stoichiometry in human cells without affinity enrichment

artículo científico publicado en 2014

SerpinB1 Promotes Pancreatic β Cell Proliferation

artículo científico publicado en 2015

Serum proteomics reveals systemic dysregulation of innate immunity in type 1 diabetes

artículo científico publicado en 2012

Shotgun proteomics identifies proteins specific for acute renal transplant rejection.

artículo científico publicado en 2010

Simultaneous Proteomic Discovery and Targeted Monitoring using Liquid Chromatography, Ion Mobility Spectrometry, and Mass Spectrometry

artículo científico publicado en 2016

Sites of proteolytic processing and noncovalent association of the distal C-terminal domain of CaV1.1 channels in skeletal muscle

artículo científico publicado en 2005

Spatial phosphoprotein profiling reveals a compartmentalized extracellular signal-regulated kinase switch governing neurite growth and retraction

artículo científico publicado en 2011

Stable acinar progenitor cell model identifies treacle-dependent radioresistance

journal article published in 2019

Systems analysis of multiple regulator perturbations allows discovery of virulence factors in Salmonella

artículo científico publicado en 2011

Targeted Quantification of Phosphorylation Dynamics in the Context of EGFR-MAPK Pathway.

artículo científico publicado en 2018

Targeted proteomic assays for quantitation of proteins identified by proteogenomic analysis of ovarian cancer

artículo científico

Temporal Proteome and Lipidome Profiles Reveal Hepatitis C Virus-Associated Reprogramming of Hepatocellular Metabolism and Bioenergetics

artículo científico publicado en 2010

The cerebrospinal fluid proteome in HIV infection: change associated with disease severity

artículo científico publicado en 2012

The current state of the art of quantitative phosphoproteomics and its applications to diabetes research

artículo científico publicado en 2016

The influence of sample preparation and replicate analyses on HeLa Cell phosphoproteome coverage

artículo científico publicado en 2008

The proteome and phosphoproteome of Neurospora crassa in response to cellulose, sucrose and carbon starvation.

artículo científico publicado en 2014

Transcriptomic and proteomic dynamics in the metabolism of a diazotrophic cyanobacterium, Cyanothece sp. PCC 7822 during a diurnal light-dark cycle

artículo científico publicado en 2014

Unveiling molecular signatures of preeclampsia and gestational diabetes mellitus with multi-omics and innovative cheminformatics visualization tools

scientific article published on 23 September 2020

Lista de obras de

A Targeted Mass Spectrometric Assay for Reliable Sensitive Hepcidin Quantification

A comparative analysis of computational approaches to relative protein quantification using peptide peak intensities in label-free LC-MS proteomics experiments.

A comprehensive collection of systems biology data characterizing the host response to viral infection.

A proteomic view ofDesulfovibrio vulgaris metabolism as determined by liquid chromatography coupled with tandem mass spectrometry

Advancing the high throughput identification of liver fibrosis protein signatures using multiplexed ion mobility spectrometry

Antibody-independent targeted quantification of TMPRSS2-ERG fusion protein products in prostate cancer.

Application of multiplexed ion mobility spectrometry towards the identification of host protein signatures of treatment effect in pulmonary tuberculosis

Application of proteomics in the discovery of candidate protein biomarkers in a diabetes autoantibody standardization program sample subset.

Applying a targeted label-free approach using LC-MS AMT tags to evaluate changes in protein phosphorylation following phosphatase inhibition

Blood peptidome-degradome profile of breast cancer

Boosting to Amplify Signal with Isobaric Labeling (BASIL) Strategy for Comprehensive Quantitative Phosphoproteomic Characterization of Small Populations of Cells.

Broad Substrate-Specific Phosphorylation Events Are Associated With the Initial Stage of Plant Cell Wall Recognition in Neurospora crassa

Cerebrospinal fluid proteome of patients with acute Lyme disease

Characterization of Purifiedc-Type Heme-Containing Peptides and Identification ofc-Type Heme-Attachment Sites inShewanellaoneidenisCytochromes Using Mass Spectrometry

Characterization of the human pancreatic islet proteome by two-dimensional LC/MS/MS

Characterization of the mouse brain proteome using global proteomic analysis complemented with cysteinyl-peptide enrichment

Characterization of the mouse pancreatic islet proteome and comparative analysis with other mouse tissues

Combined pulsed-Q dissociation and electron transfer dissociation for identification and quantification of iTRAQ-labeled phosphopeptides

Comparative phosphoproteomics reveals components of host cell invasion and post-transcriptional regulation during Francisella infection

Comparative proteome analyses of human plasma following in vivo lipopolysaccharide administration using multidimensional separations coupled with tandem mass spectrometry.

Comprehensive Proteomics Analysis of Stressed Human Islets Identifies GDF15 as a Target for Type 1 Diabetes Intervention

Comprehensive identification of glycated peptides and their glycation motifs in plasma and erythrocytes of control and diabetic subjects

Correction: Proteogenomic Characterization of Ovarian HGSC Implicates Mitotic Kinases, Replication Stress in Observed Chromosomal Instability

Coupled transcriptome and proteome analysis of human lymphotropic tumor viruses: insights on the detection and discovery of viral genes

Defective insulin receptor signaling in hPSCs skews pluripotency and negatively perturbs neural differentiation

Determination of burn patient outcome by large-scale quantitative discovery proteomics

Discovery of novel glucose-regulated proteins in isolated human pancreatic islets using LC-MS/MS-based proteomics

Diurnal rhythms result in significant changes in the cellular protein complement in the cyanobacterium Cyanothece 51142.

Dynamic Proteome Analysis of Cyanothece sp. ATCC 51142 under Constant Light

Dynamic proteomic profiling of a unicellular cyanobacterium Cyanothece ATCC51142 across light-dark diurnal cycles

Elucidating regulatory processes of intense physical activity by multi-omics analysis

Evaluation of multiprotein immunoaffinity subtraction for plasma proteomics and candidate biomarker discovery using mass spectrometry.

Global Proteomic Analysis Reveals an Exclusive Role of Thylakoid Membranes in Bioenergetics of a Model Cyanobacterium

Global proteomics reveal an atypical strategy for carbon/nitrogen assimilation by a cyanobacterium under diverse environmental perturbations

High dynamic range characterization of the trauma patient plasma proteome

Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry

Identification of a novel mitotic phosphorylation motif associated with protein localization to the mitotic apparatus

IgY14 and SuperMix immunoaffinity separations coupled with liquid chromatography-mass spectrometry for human plasma proteomics biomarker discovery.

Improved proteome coverage by using high efficiency cysteinyl peptide enrichment: the human mammary epithelial cell proteome

Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer.

Integrated molecular signature of disease: analysis of influenza virus-infected macaques through functional genomics and proteomics

Integrative analysis of the mitochondrial proteome in yeast

Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels

LC-MS/MS based proteomic analysis and functional inference of hypothetical proteins in Desulfovibrio vulgaris

Large-Scale and Deep Quantitative Proteome Profiling Using Isobaric Labeling Coupled with Two-Dimensional LC-MS/MS.

Large-scale multiplexed quantitative discovery proteomics enabled by the use of an (18)O-labeled "universal" reference sample

Longitudinal analysis of host protein serum signatures of treatment and recovery in pulmonary tuberculosis

Macaque proteome response to highly pathogenic avian influenza and 1918 reassortant influenza virus infections

Mitotic protein kinase CDK1 phosphorylation of mRNA translation regulator 4E-BP1 Ser83 may contribute to cell transformation

Morphine produces immunosuppressive effects in nonhuman primates at the proteomic and cellular levels

Multi-platform 'Omics Analysis of Human Ebola Virus Disease Pathogenesis

Phosphoproteome Analysis Reveals Estrogen-ER Pathway as a Modulator of mTOR Activity Via DEPTOR

Phosphoproteomics profiling of human skin fibroblast cells reveals pathways and proteins affected by low doses of ionizing radiation

Preconditioning in the Rhesus Macaque Induces a Proteomic Signature Following Cerebral Ischemia that Is Associated with Neuroprotection

Preserved DNA Damage Checkpoint Pathway Protects against Complications in Long-Standing Type 1 Diabetes

Proteogenomic Analysis of Human Colon Cancer Reveals New Therapeutic Opportunities

Proteogenomic Characterization of Endometrial Carcinoma

Proteogenomic Characterization of Ovarian HGSC Implicates Mitotic Kinases, Replication Stress in Observed Chromosomal Instability

Proteome analysis of liver cells expressing a full-length hepatitis C virus (HCV) replicon and biopsy specimens of posttransplantation liver from HCV-infected patients

Proteome and computational analyses reveal new insights into the mechanisms of hepatitis C virus-mediated liver disease posttransplantation

Proteomic analysis of saliva in HIV-positive heroin addicts reveals proteins correlated with cognition

Proteomic analysis reveals down-regulation of surfactant protein B in murine type II pneumocytes infected with influenza A virus.

Proteomic profiling of exosomes leads to the identification of novel biomarkers for prostate cancer

Proteomic profiling of human liver biopsies: hepatitis C virus-induced fibrosis and mitochondrial dysfunction

QC-ART: A tool for real-time quality control assessment of mass spectrometry-based proteomics data.

Quantitative analysis of cell surface membrane proteins using membrane-impermeable chemical probe coupled with 18O labeling.

Quantitative analysis of human immunodeficiency virus type 1-infected CD4+ cell proteome: dysregulated cell cycle progression and nuclear transport coincide with robust virus production

Quantitative phosphoproteomic analysis of soybean root hairs inoculated with Bradyrhizobium japonicum

Quantitative phosphoproteomics identifies filaggrin and other targets of ionizing radiation in a human skin model.

Quantitative proteomics identifies altered O-GlcNAcylation of structural, synaptic and memory-associated proteins in Alzheimer's disease

Regulation of gene expression and subcellular protein distribution in MLO-Y4 osteocytic cells by lysophosphatidic acid: Relevance to dendrite outgrowth

Reproducible workflow for multiplexed deep-scale proteome and phosphoproteome analysis of tumor tissues by liquid chromatography-mass spectrometry

Residual tissue repositories as a resource for population-based cancer proteomic studies

Reversed-phase chromatography with multiple fraction concatenation strategy for proteome profiling of human MCF10A cells

Selective Enrichment Coupled with Proteomics to Identify S-Acylated Plasma Membrane Proteins in Arabidopsis

Sensitive targeted quantification of ERK phosphorylation dynamics and stoichiometry in human cells without affinity enrichment

SerpinB1 Promotes Pancreatic β Cell Proliferation

Serum proteomics reveals systemic dysregulation of innate immunity in type 1 diabetes

Shotgun proteomics identifies proteins specific for acute renal transplant rejection.