Lista de obras -

A bioinformatics workflow for variant peptide detection in shotgun proteomics

artículo científico publicado en 2011

A comparison between ribo-minus RNA-sequencing and polyA-selected RNA-sequencing

artículo científico publicado en 2010

Alkylation damage by lipid electrophiles targets functional protein systems

scientific article published on 15 January 2014

An RNA-seq-based gene expression profiling of radiation-induced tumorigenic mammary epithelial cells

scientific article published on 04 December 2012

Analysis of expressed sequence tags in porcine uterus tissue

artículo científico publicado en 2009

BIGpre: a quality assessment package for next-generation sequencing data

artículo científico publicado en 2011

Comparative analysis of clustered regularly interspaced short palindromic repeats (CRISPRs) loci in the genomes of halophilic archaea

artículo científico publicado en 2009

Comparative genomics reveals adaptive evolution of Asian tapeworm in switching to a new intermediate host

artículo científico publicado en 2016

Complete genome of Phenylobacterium zucineum--a novel facultative intracellular bacterium isolated from human erythroleukemia cell line K562.

artículo científico publicado en 2008

Complete genome sequence of Alicyclobacillus acidocaldarius strain Tc-4-1.

artículo científico

Complete genome sequence of Bifidobacterium longum subsp. longum BBMN68, a new strain from a healthy chinese centenarian

artículo científico publicado en 2010

Complete genome sequence of the metabolically versatile halophilic archaeon Haloferax mediterranei, a poly(3-hydroxybutyrate-co-3-hydroxyvalerate) producer

artículo científico publicado en 2012

Correction: Environmental Adaptation: Genomic Analysis of the Piezotolerant and Psychrotolerant Deep-Sea Iron Reducing Bacterium Shewanella piezotolerans WP3.

artículo científico publicado en 2008

Detection and genotyping of restriction fragment associated polymorphisms in polyploid crops with a pseudo-reference sequence: a case study in allotetraploid Brassica napus

artículo científico publicado en 2013

EST-based analysis of gene expression in the porcine brain

artículo científico publicado en 2004

Environmental adaptation: genomic analysis of the piezotolerant and psychrotolerant deep-sea iron reducing bacterium Shewanella piezotolerans WP3

artículo científico publicado en 2008

Gene expression profiling in porcine mammary gland during lactation and identification of breed- and developmental-stage-specific genes

artículo científico

Global analysis of protein damage by the lipid electrophile 4-hydroxy-2-nonenal

artículo científico publicado en 2008

Identification of immune genes of the Agamaki clam (Sinonovacula constricta) by sequencing and bioinformatic analysis of ESTs

artículo científico publicado en 2009

Identification of immune-relevant genes by expressed sequence tag analysis of head kidney from grass carp (Ctenopharyngodon idella).

artículo científico publicado en 2010

LongSAGE gene-expression profiling of Botrytis cinerea germination suppressed by resveratrol, the major grapevine phytoalexin

artículo científico publicado en 2011

Mining genes involved in the stratification of Paris polyphylla seeds using high-throughput embryo transcriptome sequencing

artículo científico publicado en 2013

Network-assisted protein identification and data interpretation in shotgun proteomics

artículo científico publicado en 2009

Novel microRNAs in silkworm (Bombyx mori).

artículo científico publicado en 2010

Protein identification using customized protein sequence databases derived from RNA-Seq data

artículo científico publicado en 2011

Proteogenomic analysis reveals unanticipated adaptations of colorectal tumor cells to deficiencies in DNA mismatch repair.

artículo científico publicado en 2013

Proteogenomic characterization of human colon and rectal cancer

artículo científico publicado en 2014

Proteomic analysis of colon and rectal carcinoma using standard and customized databases

artículo científico publicado en 2015

Proteomic consequences of a single gene mutation in a colorectal cancer model

artículo científico publicado en 2011

RNA-seq data analysis at the gene and CDS levels provides a comprehensive view of transcriptome responses induced by 4-hydroxynonenal

artículo científico publicado en 2013

Rapid growth of a hepatocellular carcinoma and the driving mutations revealed by cell-population genetic analysis of whole-genome data

artículo científico publicado en 2011

Relating protein adduction to gene expression changes: a systems approach

artículo científico publicado en 2011

Reproducibility of Differential Proteomic Technologies in CPTAC Fractionated Xenografts

artículo científico publicado en 2015

The Genomes of Oryza sativa: a history of duplications

artículo científico publicado en 2005

The rubber tree genome reveals new insights into rubber production and species adaptation.

artículo científico publicado en 2016

Transcriptome analysis of Deinagkistrodon acutus venomous gland focusing on cellular structure and functional aspects using expressed sequence tags

artículo científico publicado en 2006

Whole transcriptome RNA-seq analysis: tumorigenesis and metastasis of melanoma

artículo científico publicado en 2014

[Analysis of gene expression profiles in heart tissues from two breeds of pigs].

artículo científico publicado en 2004

proBAMsuite, a Bioinformatics Framework for Genome-Based Representation and Analysis of Proteomics Data

artículo científico publicado en 2015

Lista de obras de

A bioinformatics workflow for variant peptide detection in shotgun proteomics

A comparison between ribo-minus RNA-sequencing and polyA-selected RNA-sequencing

Alkylation damage by lipid electrophiles targets functional protein systems

An RNA-seq-based gene expression profiling of radiation-induced tumorigenic mammary epithelial cells

Analysis of expressed sequence tags in porcine uterus tissue

BIGpre: a quality assessment package for next-generation sequencing data

Comparative analysis of clustered regularly interspaced short palindromic repeats (CRISPRs) loci in the genomes of halophilic archaea

Comparative genomics reveals adaptive evolution of Asian tapeworm in switching to a new intermediate host

Complete genome of Phenylobacterium zucineum--a novel facultative intracellular bacterium isolated from human erythroleukemia cell line K562.

Complete genome sequence of Alicyclobacillus acidocaldarius strain Tc-4-1.

Complete genome sequence of Bifidobacterium longum subsp. longum BBMN68, a new strain from a healthy chinese centenarian

Complete genome sequence of the metabolically versatile halophilic archaeon Haloferax mediterranei, a poly(3-hydroxybutyrate-co-3-hydroxyvalerate) producer

Correction: Environmental Adaptation: Genomic Analysis of the Piezotolerant and Psychrotolerant Deep-Sea Iron Reducing Bacterium Shewanella piezotolerans WP3.

Detection and genotyping of restriction fragment associated polymorphisms in polyploid crops with a pseudo-reference sequence: a case study in allotetraploid Brassica napus

EST-based analysis of gene expression in the porcine brain

Environmental adaptation: genomic analysis of the piezotolerant and psychrotolerant deep-sea iron reducing bacterium Shewanella piezotolerans WP3

Gene expression profiling in porcine mammary gland during lactation and identification of breed- and developmental-stage-specific genes

Global analysis of protein damage by the lipid electrophile 4-hydroxy-2-nonenal

Identification of immune genes of the Agamaki clam (Sinonovacula constricta) by sequencing and bioinformatic analysis of ESTs

Identification of immune-relevant genes by expressed sequence tag analysis of head kidney from grass carp (Ctenopharyngodon idella).

LongSAGE gene-expression profiling of Botrytis cinerea germination suppressed by resveratrol, the major grapevine phytoalexin

Mining genes involved in the stratification of Paris polyphylla seeds using high-throughput embryo transcriptome sequencing

Network-assisted protein identification and data interpretation in shotgun proteomics

Novel microRNAs in silkworm (Bombyx mori).

Protein identification using customized protein sequence databases derived from RNA-Seq data

Proteogenomic analysis reveals unanticipated adaptations of colorectal tumor cells to deficiencies in DNA mismatch repair.

Proteogenomic characterization of human colon and rectal cancer

Proteomic analysis of colon and rectal carcinoma using standard and customized databases

Proteomic consequences of a single gene mutation in a colorectal cancer model

RNA-seq data analysis at the gene and CDS levels provides a comprehensive view of transcriptome responses induced by 4-hydroxynonenal

Rapid growth of a hepatocellular carcinoma and the driving mutations revealed by cell-population genetic analysis of whole-genome data

Relating protein adduction to gene expression changes: a systems approach

Reproducibility of Differential Proteomic Technologies in CPTAC Fractionated Xenografts

The Genomes of Oryza sativa: a history of duplications

The rubber tree genome reveals new insights into rubber production and species adaptation.

Transcriptome analysis of Deinagkistrodon acutus venomous gland focusing on cellular structure and functional aspects using expressed sequence tags

Whole transcriptome RNA-seq analysis: tumorigenesis and metastasis of melanoma

[Analysis of gene expression profiles in heart tissues from two breeds of pigs].

proBAMsuite, a Bioinformatics Framework for Genome-Based Representation and Analysis of Proteomics Data