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Lista de obras de Didier Debroas

A De Novo Robust Clustering Approach for Amplicon-Based Sequence Data

artículo científico publicado en 2018

A Pediococcus strain to rescue honeybees by decreasing Nosema ceranae- and pesticide-induced adverse effects

scientific article published on 08 November 2019

A high-throughput sequencing ecotoxicology study of freshwater bacterial communities and their responses to tebuconazole.

artículo científico publicado en 2014

A strong link between marine microbial community composition and function challenges the idea of functional redundancy

artículo científico publicado en 2018

Active microorganisms thrive among extremely diverse communities in cloud water.

artículo científico publicado en 2017

Anaerobic microbial communities in Lake Pavin, a unique meromictic lake in France

artículo científico publicado en 2005

Analysis of metagenomic data reveals common features of halophilic viral communities across continents

artículo científico publicado en 2015

Assessing the diversity and specificity of two freshwater viral communities through metagenomics

artículo científico publicado en 2012

Assessing the response of micro-eukaryotic diversity to the Great Acceleration using lake sedimentary DNA

artículo científico publicado en 2020

Assessment of viral community functional potential from viral metagenomes may be hampered by contamination with cellular sequences.

artículo científico publicado en 2013

Bacterial Communities Associated with Four Cyanobacterial Genera Display Structural and Functional Differences: Evidence from an Experimental Approach.

artículo científico publicado en 2016

Bacterial communities associated with Microcystis colonies differ from free-living communities living in the same ecosystem

artículo científico publicado en 2013

Chronic Polyaromatic Hydrocarbon (PAH) Contamination Is a Marginal Driver for Community Diversity and Prokaryotic Predicted Functioning in Coastal Sediments

artículo científico publicado en 2016

Community composition and activity of prokaryotes associated to detrital particles in two contrasting lake ecosystems

artículo científico publicado en 2006

Community composition of lacustrine small eukaryotes in hyper-eutrophic conditions in relation to top-down and bottom-up factors

article

Community structure and dynamics of small eukaryotes targeted by new oligonucleotide probes: new insight into the lacustrine microbial food web.

artículo científico publicado en 2009

Comparison of 16S rRNA and protein-coding genes as molecular markers for assessing microbial diversity (Bacteria and Archaea) in ecosystems.

artículo científico publicado en 2011

Comparison of the structure and composition of bacterial communities from temperate and tropical freshwater ecosystems.

artículo científico publicado en 2009

Correction: Structural Diversity of Bacterial Communities Associated with Bloom-Forming Freshwater Cyanobacteria Differs According to the Cyanobacterial Genus

artículo científico publicado en 2016

Deciphering biodiversity and interactions between bacteria and microeukaryotes within epilithic biofilms from the Loue River, France.

artículo científico publicado en 2017

Distribution of Dehalococcoidia in the Anaerobic Deep Water of a Remote Meromictic Crater Lake and Detection of Dehalococcoidia-Derived Reductive Dehalogenase Homologous Genes

artículo científico publicado en 2016

Diversity and Dynamics of Active Small Microbial Eukaryotes in the Anoxic Zone of a Freshwater Meromictic Lake (Pavin, France).

artículo científico publicado en 2016

Diversity and dynamics of free-living and particle-associated Betaproteobacteria and Actinobacteria in relation to phytoplankton and zooplankton communities

artículo científico publicado en 2011

Diversity of Rare and Abundant Prokaryotic Phylotypes in the Prony Hydrothermal Field and Comparison with Other Serpentinite-Hosted Ecosystems

artículo científico publicado en 2018

Diversity, spatial distribution and activity of fungi in freshwater ecosystems

artículo científico publicado en 2019

Dynamics of ammonia-oxidizing Archaea and Bacteria in contrasted freshwater ecosystems

artículo científico publicado en 2013

Effects of nutrients and warming onPlanktothrixdynamics and diversity: a palaeolimnological view based on sedimentary DNA and RNA

article

Effects of viruses and predators on prokaryotic community composition

artículo científico publicado en 2005

Evidence for an active rare biosphere within freshwater protists community.

artículo científico publicado en 2015

Evolution and diversity of the Microviridae viral family through a collection of 81 new complete genomes assembled from virome reads

artículo científico publicado en 2012

Genetic diversity of small eukaryotes in lakes differing by their trophic status

artículo científico publicado en 2005

Genomic ecology of Marine Group II, the most common marine planktonic Archaea across the surface ocean

scientific article published on 02 July 2019

Geographic distance and ecosystem size determine the distribution of smallest protists in lacustrine ecosystems

artículo científico publicado en 2013

Honeybee gut microbiota dysbiosis in pesticide/parasite co-exposures is mainly induced by Nosema ceranae

artículo científico publicado en 2020

Impact of environmental factors on couplings between bacterial community composition and ectoenzymatic activities in a lacustrine ecosystem

artículo científico publicado en 2009

Incorporation of 3H-thymidine by different prokaryotic groups in relation to temperature and nutrients in a lacustrine ecosystem

scientific article published on 08 June 2006

Is Planktonic Diversity Well Recorded in Sedimentary DNA? Toward the Reconstruction of Past Protistan Diversity

artículo científico publicado en 2015

Long-term dynamics in microbial eukaryotes communities: a palaeolimnological view based on sedimentary DNA.

artículo científico publicado en 2016

Metagenomic approach studying the taxonomic and functional diversity of the bacterial community in a mesotrophic lake (Lac du Bourget--France).

artículo científico publicado en 2009

Metagenomics applied to environmental viral communities

scientific article published on 01 August 2013

Metavir 2: new tools for viral metagenome comparison and assembled virome analysis

artículo científico publicado en 2014

Metavir: a web server dedicated to virome analysis

artículo científico publicado en 2011

Monitoring human enteric viruses in wastewater and relevance to infections encountered in the clinical setting: a one-year experiment in central France, 2014 to 2015.

artículo científico publicado en 2018

Monitoring of enterovirus diversity in wastewater by ultra-deep sequencing: An effective complementary tool for clinical enterovirus surveillance

scientific article published on 31 October 2019

New insights into the pelagic microorganisms involved in the methane cycle in the meromictic Lake Pavin through metagenomics

scientific article published on 01 March 2019

Overview of freshwater microbial eukaryotes diversity: a first analysis of publicly available metabarcoding data.

artículo científico publicado en 2017

Perkinsozoa, a well-known marine protozoan flagellate parasite group, newly identified in lacustrine systems: a review

article

Phylogenetic affiliation of SSU rRNA genes generated by massively parallel sequencing: new insights into the freshwater protist diversity

artículo científico publicado en 2013

Plastics in the North Atlantic garbage patch: A boat-microbe for hitchhikers and plastic degraders

artículo científico publicado en 2017

Protist taxonomic and functional diversity in soil, freshwater and marine ecosystems

artículo científico publicado en 2020

Quantitative PCR enumeration of total/toxic Planktothrix rubescens and total cyanobacteria in preserved DNA isolated from lake sediments

artículo científico publicado en 2011

Reconstruction of plasmids by shotgun sequencing from environmental DNA: which bioinformatic workflow?

artículo científico publicado en 2020

Relative importance of nutrients and mortality factors on prokaryotic community composition in two lakes of different trophic status: microcosm experiments

artículo científico publicado en 2005

Seasonality of archaeal proteorhodopsin and associated Marine Group IIb ecotypes (Ca. Poseidoniales) in the North Western Mediterranean Sea

artículo científico publicado en 2020

Short-term dynamics of diversity patterns: evidence of continual reassembly within lacustrine small eukaryotes

artículo científico publicado en 2013

Short-term responses of unicellular planktonic eukaryotes to increases in temperature and UVB radiation

artículo científico publicado en 2012

Spatio-Temporal Variations of Marine Biofilm Communities Colonizing Artificial Substrata Including Antifouling Coatings in Contrasted French Coastal Environments.

artículo científico publicado en 2017

Structural Diversity of Bacterial Communities Associated with Bloom-Forming Freshwater Cyanobacteria Differs According to the Cyanobacterial Genus

artículo científico publicado en 2015

Structure of the rare archaeal biosphere and seasonal dynamics of active ecotypes in surface coastal waters.

artículo científico publicado en 2013

Succession and regulation factors of small eukaryote community composition in a lacustrine ecosystem (Lake Pavin).

artículo científico publicado en 2006

Succession of bacterial community composition over two consecutive years in two aquatic systems: a natural lake and a lake-reservoir

scientific article published on 01 January 2006

Technical challenges in metatranscriptomic studies applied to the bacterial communities of freshwater ecosystems

artículo científico publicado en 2014

Temporal Dynamics of Active Prokaryotic Nitrifiers and Archaeal Communities from River to Sea.

artículo científico publicado en 2015

Temporal covariation of epibacterial community and surface metabolome in the Mediterranean seaweed holobiont Taonia atomaria

scientific article published on 04 April 2019

Temporal dynamics and phylogenetic diversity of free-living and particle-associatedVerrucomicrobiacommunities in relation to environmental variables in a mesotrophic lake ⬇️

artículo científico publicado el 19 de septiembre de 2012

Temporal dynamics of active Archaea in oxygen-depleted zones of two deep lakes

artículo científico publicado en 2015

To what extent is the DNA of microbial eukaryotes modified during burying into lake sediments? A repeat-coring approach on annually laminated sediments

scholarly article

Tracking a century of changes in microbial eukaryotic diversity in lakes driven by nutrient enrichment and climate warming

artículo científico publicado en 2017

Transient Dynamics of Archaea and Bacteria in Sediments and Brine Across a Salinity Gradient in a Solar Saltern of Goa, India

scientific article published on 13 August 2020

Unexpected importance of potential parasites in the composition of the freshwater small-eukaryote community

artículo científico publicado en 2008

Vertical structure of small eukaryotes in three lakes that differ by their trophic status: a quantitative approach

artículo científico publicado en 2010

Viruses as key reservoirs of antibiotic resistance genes in the environment

artículo científico publicado en 2019

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