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A Framework for Automated Construction of Heterogeneous Large-Scale Biomedical Knowledge Graphs

artículo científico publicado en 2020

A UIMA wrapper for the NCBO annotator

artículo científico publicado en 2010

A corpus of full-text journal articles is a robust evaluation tool for revealing differences in performance of biomedical natural language processing tools

artículo científico publicado en 2012

An open-source framework for large-scale, flexible evaluation of biomedical text mining systems

artículo científico publicado en 2008

BioLemmatizer: a lemmatization tool for morphological processing of biomedical text

artículo científico publicado en 2012

Biomedical discovery acceleration, with applications to craniofacial development

artículo científico publicado en 2009

CaGE: cardiac gene expression knowledgebase.

artículo científico publicado en 2002

Concept annotation in the CRAFT corpus

artículo científico publicado en 2012

Concept recognition as a machine translation problem

artículo científico publicado en 2021

Concept recognition for extracting protein interaction relations from biomedical text

artículo científico publicado en 2008

Coreference annotation and resolution in the Colorado Richly Annotated Full Text (CRAFT) corpus of biomedical journal articles

artículo científico publicado en 2017

Coreference resolution improves extraction of Biological Expression Language statements from texts

artículo científico publicado en 2016

Corpus refactoring: a feasibility study

artículo científico publicado en 2007

Evaluation of lexical methods for detecting relationships between concepts from multiple ontologies.

artículo científico publicado en 2006

Exploring species-based strategies for gene normalization.

artículo científico publicado en 2010

Gold-standard ontology-based anatomical annotation in the CRAFT Corpus

article

HIGH-PRECISION BIOLOGICAL EVENT EXTRACTION: EFFECTS OF SYSTEM AND OF DATA.

artículo científico publicado en 2011

High-precision biological event extraction with a concept recognizer

scientific article published in 2009

Improving precision in concept normalization

artículo científico publicado en 2018

Improving protein function prediction methods with integrated literature data

artículo científico publicado en 2008

Introducing meta-services for biomedical information extraction

artículo científico publicado en 2008

KaBOB: ontology-based semantic integration of biomedical databases

artículo científico publicado en 2015

Large-scale biomedical concept recognition: an evaluation of current automatic annotators and their parameters

artículo científico publicado en 2014

Manual curation is not sufficient for annotation of genomic databases

artículo científico publicado en 2007

Mining Protein-Protein Interactions from GeneRIFs with OpenDMAP

article

MutationFinder: a high-performance system for extracting point mutation mentions from text

artículo científico publicado en 2007

OWL-NETS: Transforming OWL Representations for Improved Network Inference.

artículo científico publicado en 2018

OpenDMAP: an open source, ontology-driven concept analysis engine, with applications to capturing knowledge regarding protein transport, protein interactions and cell-type-specific gene expression

artículo científico publicado en 2008

Overview of BioCreative II gene mention recognition

artículo científico publicado en 2008

Rapid pattern development for concept recognition systems: application to point mutations

artículo científico publicado en 2007

Refactoring corpora

Refactoring corpora

Software testing and the naturally occurring data assumption in natural language processing

article

Sublanguage Corpus Analysis Toolkit: A tool for assessing the representativeness and sublanguage characteristics of corpora

SuperCAT: The (New and Improved) Corpus Analysis Toolkit

article published in 2016

U-Compare: share and compare text mining tools with UIMA

artículo científico publicado en 2009

Visualization and Language Processing for Supporting Analysis across the Biomedical Literature

scholarly article by Carsten Görg et al published 2010 in Lecture Notes in Computer Science